ID:

mml-let-7d

 Coordinate:

chr15:107891161-107891247 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.9 -48.8 -48.7

Sense Strand Reads

TTGAAGTGCATCTGCCAAGTAGAAGACCAGCAAGAAAAAAAAAATGGGTTCCTAGGAAGAGGTAGTAGGTTGCATAGTTTTAGGGCAGGGATTTTGCCCACAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGGGCCTTATTATTCAACGGTAACCTGTTTCCTTGCTACTTTGCTTTGGTGTA

******************************************((((((.((((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))).))))))...*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116845

epididymis		 SRR116844

epididymis		 SRR116839

testes
.........................................................AGAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 0 1 110403.00 110403 56390 19795 17282 15617 1 0 1318
.........................................................AGAGGTAGTAGGTTGCATAGT............................................................................................................. 21 0 1 14457.00 14457 6635 3447 2291 1963 0 0 121
.........................................................AGAGGTAGTAGGTTGCATAGTTA........................................................................................................... 23 1 1 14377.00 14377 5772 2889 2957 2573 3 1 182
.........................................................AGAGGTAGTAGGTTGCATAGTTT........................................................................................................... 23 0 1 14204.00 14204 6260 3005 2283 2451 1 0 204
.........................................................AGAGGTAGTAGGTTGCATAGTTATC......................................................................................................... 25 2 1 4511.00 4511 0 0 0 0 3048 1463 0
.........................................................AGAGGTAGTAGGTTGCATAG.............................................................................................................. 20 0 1 4328.00 4328 1506 1568 682 501 0 0 71
.........................................................AGAGGTAGTAGGTTGCATAGTA............................................................................................................ 22 1 1 2321.00 2321 564 740 572 417 0 1 27
.........................................................AGAGGTAGTAGGTTGCATATTT............................................................................................................ 22 1 1 1599.00 1599 622 440 26 490 0 0 21
.........................................................AGAGGTAGTAGGTTGCATAGTTAA.......................................................................................................... 24 2 1 1335.00 1335 505 293 249 252 0 2 34
.........................................................AGAGGTAGTAGGTTGCATAGTAA........................................................................................................... 23 2 1 1084.00 1084 330 302 231 209 0 0 12
.........................................................AGAGGTAGTAGGTTTCATAGTT............................................................................................................ 22 1 1 1000.00 1000 491 284 28 179 0 0 18
.........................................................AGAGGTAGTAGGTTGCATAGTATC.......................................................................................................... 24 2 1 978.00 978 0 0 0 0 672 306 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTT.......................................................................................................... 24 0 1 663.00 663 214 119 77 242 1 0 10
.........................................................AGAGGTAGTAGGTTGCATAGA............................................................................................................. 21 1 1 624.00 624 132 289 128 69 0 0 6
.........................................................AGAGGTAGTAGGTTGCATAGTTG........................................................................................................... 23 1 1 548.00 548 230 98 129 80 0 0 11
.........................................................AGAGGTAGTAGGTTGTATAGTT............................................................................................................ 22 1 4 523.00 2092 1398 287 169 232 0 0 6
.........................................................AGAGGTAGTAGGTTGCATAGTTTATC........................................................................................................ 26 3 1 508.00 508 0 0 0 0 378 130 0
.........................................................AGAGGTAGTAGGTTGCATAGTTAT.......................................................................................................... 24 1 1 474.00 474 189 107 77 84 2 0 15
.........................................................AGAGGTAGTAGTTTGCATAGTT............................................................................................................ 22 1 1 443.00 443 323 48 12 56 0 0 4
.........................................................AGAGGTAGTAGGTTGCAT................................................................................................................ 18 0 1 417.00 417 184 97 57 73 0 0 6
.........................................................AGAGGTAGTAGGTTGCATAGTAT........................................................................................................... 23 1 1 417.00 417 78 161 92 79 0 0 7
.........................................................AGAGGTAGTAGGTTGCATA............................................................................................................... 19 0 1 415.00 415 201 104 55 47 0 0 8
.........................................................AGAGGTAGTAGGTTGCATAA.............................................................................................................. 20 1 1 333.00 333 62 122 75 67 0 0 7
.........................................................AGAGGTAGTAGGTTGCATATT............................................................................................................. 21 1 1 276.00 276 101 104 1 68 0 0 2
.........................................................AGAGGTAGTAGCTTGCATAGTT............................................................................................................ 22 1 1 239.00 239 232 3 2 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATATTTA........................................................................................................... 23 2 1 229.00 229 76 68 2 81 0 0 2
.........................................................AGAGGTAGTAGGTTGCATAGAA............................................................................................................ 22 2 2 215.50 431 76 187 88 75 0 0 5
.........................................................AGAGGTAGTAGGTTGCATAGTTTA.......................................................................................................... 24 1 1 200.00 200 75 47 42 31 0 0 5
.........................................................AGAGGTAGTAGGTTGCCTAGTT............................................................................................................ 22 1 2 195.00 390 182 64 72 68 0 0 4
.........................................................AGAGGTAGTAGATTGCATAGTT............................................................................................................ 22 1 1 184.00 184 159 7 4 14 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGATC........................................................................................................... 23 2 1 178.00 178 0 0 0 0 121 57 0
.........................................................AGAGGTAGTAGGTTGCATATTTT........................................................................................................... 23 1 1 173.00 173 60 55 0 57 0 0 1
.........................................................AGAGGTAGTAGGTTTCATAGT............................................................................................................. 21 1 1 166.00 166 65 57 5 34 0 0 5
.........................................................TGAGGTAGTAGGTTGCATAGTTATC......................................................................................................... 25 3 2 165.50 331 0 0 0 0 272 59 0
.........................................................AGAGGTAGTAGGTTGCATCGTT............................................................................................................ 22 1 1 163.00 163 106 20 19 15 0 0 3
.........................................................AGAGGTAGTAGGTTGCATGGTT............................................................................................................ 22 1 1 159.00 159 97 27 15 18 0 0 2
.........................................................TGAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 4 145.00 580 241 66 219 51 0 0 3
.........................................................AGAGGTAGTAGGTTTCATAGTTT........................................................................................................... 23 1 1 138.00 138 59 43 8 27 0 0 1
.........................................................AGAGGTAGTAGGGTGCATAGTT............................................................................................................ 22 1 1 136.00 136 70 17 35 12 0 0 2
.........................................................AGAGGTGGTAGGTTGCATAGTT............................................................................................................ 22 1 1 125.00 125 64 13 28 18 0 0 2
.........................................................AGAGGTAGTAGGTTGCATAT.............................................................................................................. 20 1 1 114.00 114 34 54 4 22 0 0 0
.........................................................AGAGGTAGTAGGTTTCATAGTTA........................................................................................................... 23 2 1 107.00 107 36 36 2 30 0 0 3
...............................................................................................................CTATACGACCTGCTGCCTTTCTATC................................................... 25 3 1 104.00 104 0 0 0 0 54 50 0
..........................................................GAGGTAGTAGGTTGCATAGTT............................................................................................................ 21 0 1 92.00 92 48 14 14 13 0 0 3
.........................................................AGCGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 90.00 90 39 17 25 9 0 0 0
.......................................................AAAGAGGTAGTAGGTTGCATAGTT............................................................................................................ 24 1 1 90.00 90 48 16 10 15 0 0 1
.........................................................AGAGGTAGTAGGTTGCATAGAATC.......................................................................................................... 24 3 1 89.00 89 0 0 0 0 60 29 0
.........................................................AGAGGTAGTAGGTTGCCTAGTTATC......................................................................................................... 25 3 1 88.00 88 0 0 0 0 56 32 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTTT......................................................................................................... 25 1 1 77.00 77 12 4 2 57 1 0 1
.........................................................AGAGGTAGTAGGTTGCATAGTTC........................................................................................................... 23 1 1 75.00 75 40 9 13 12 1 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTAG........................................................................................................... 23 2 1 75.00 75 23 25 18 9 0 0 0
........................................................AAGAGGTAGTAGGTTGCATAGTT............................................................................................................ 23 0 1 75.00 75 51 5 5 14 0 0 0
.........................................................AGAGGTAGTAGGTTCCATAGTT............................................................................................................ 22 1 1 72.00 72 41 10 9 12 0 0 0
.........................................................AGAGGTAGTAGGTTGCGTAGTT............................................................................................................ 22 1 1 70.00 70 34 11 15 10 0 0 0
.........................................................AGAGGTAGTATGTTGCATAGTT............................................................................................................ 22 1 1 68.00 68 41 10 3 8 0 0 6
.........................................................AGAGGTAGTAGGTTGCATTGTT............................................................................................................ 22 1 1 67.00 67 49 11 1 6 0 0 0
.........................................................AGAGGTAGTAGGTTGCACAGTT............................................................................................................ 22 1 1 64.00 64 45 5 8 6 0 0 0
.........................................................AGAGGTAGTAGGCTGCATAGTT............................................................................................................ 22 1 1 63.00 63 38 11 9 5 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTAATC......................................................................................................... 25 3 2 59.50 119 0 0 0 0 90 29 0
.........................................................GGAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 59.00 59 29 14 10 6 0 0 0
.........................................................AGAGGTAGTAGGTTGTATAGTTT........................................................................................................... 23 1 4 56.75 227 124 35 19 47 0 0 2
.........................................................AGGGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 54.00 54 37 4 6 6 0 0 1
.........................................................AGAGGTAGTAGTTTGCATAGTTT........................................................................................................... 23 1 1 53.00 53 31 5 5 12 0 0 0
...............................................................................................................CTATACGACCTGCTGCCTTTCT...................................................... 22 0 1 51.00 51 26 8 8 9 0 0 0
.........................................................AGAGGTAGGAGGTTGCATAGTTATC......................................................................................................... 25 3 1 51.00 51 0 0 0 0 30 21 0
.........................................................AGAGGTAGGAGGTTGCATAGTT............................................................................................................ 22 1 1 50.00 50 26 4 16 4 0 0 0
.........................................................ATAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 50.00 50 25 8 8 8 0 0 1
.........................................................AGAGGTAGTAGGTCGCATAGTT............................................................................................................ 22 1 1 45.00 45 24 10 7 4 0 0 0
.........................................................AGAGGTAGTAGGTTGCA................................................................................................................. 17 0 2 44.50 89 21 24 24 13 2 5 0
.........................................................AGAGGTAGTAGTTTGCATAGT............................................................................................................. 21 1 1 44.00 44 31 9 0 4 0 0 0
.........................................................AGAGGTAGTAGGTTGTATAGT............................................................................................................. 21 1 4 42.50 170 90 32 20 28 0 0 0
.........................................................AGAGGTAGTAGGTTGGATAGTT............................................................................................................ 22 1 1 40.00 40 21 6 6 7 0 0 0
.........................................................AGAGGTAGTAGGTTGCATACTT............................................................................................................ 22 1 1 39.00 39 26 4 3 6 0 0 0
.........................................................AGAGGTAGTCGGTTGCATAGTT............................................................................................................ 22 1 1 39.00 39 26 4 6 3 0 0 0
.........................................................AGAGGTAGTGGGTTGCATAGTT............................................................................................................ 22 1 1 38.00 38 19 7 5 7 0 0 0
.........................................................AGAGGTAGTAGGTTGTATAGTTATC......................................................................................................... 25 3 3 37.67 113 0 0 0 0 96 17 0
.........................................................AGAGGTAGTAGGTTGCATT............................................................................................................... 19 1 2 37.50 75 43 19 8 5 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTGT.......................................................................................................... 24 1 1 37.00 37 21 6 5 4 1 0 0
........................................................AAGAGGTAGTAGGTTGCATAGT............................................................................................................. 22 0 1 37.00 37 22 5 8 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCCTAGTTA........................................................................................................... 23 2 2 36.00 72 24 18 15 15 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGAT............................................................................................................ 22 1 1 36.00 36 6 21 5 3 0 0 1
.........................................................AGAGGTAGTAGGTTGCATAGTTATT......................................................................................................... 25 2 1 35.00 35 3 0 0 1 13 16 2
.........................................................AGAGGTAGTAGGTTGCTTAGTT............................................................................................................ 22 1 1 35.00 35 18 7 8 0 0 0 2
.........................................................AGAGGGAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 34.00 34 7 7 3 13 0 0 4
.........................................................AGAGGTAGTAGTTTGCATAGTTA........................................................................................................... 23 2 1 34.00 34 24 3 1 5 0 0 1
.........................................................AGAGGTAGTAGGTTGCATAGCT............................................................................................................ 22 1 1 34.00 34 18 7 6 3 0 0 0
.........................................................AGAGGTAGTAGGTTTCATAG.............................................................................................................. 20 1 2 33.50 67 20 31 2 11 0 0 3
.........................................................AGAGGTAGTAGGTTTCATATTT............................................................................................................ 22 2 4 32.25 129 67 39 0 22 0 0 1
.........................................................AGAGGCAGTAGGTTGCATAGTT............................................................................................................ 22 1 2 32.00 64 30 4 9 4 0 0 17
.........................................................AGAGGTAGTAGGTTGCATAGGT............................................................................................................ 22 1 1 32.00 32 11 4 15 2 0 0 0
........................................................CAGAGGTAGTAGGTTGCATAGTT............................................................................................................ 23 1 1 32.00 32 19 1 11 1 0 0 0
.........................................................AGATGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 32.00 32 16 5 3 4 0 0 4
.........................................................AGAGGTAGTAGGTTGCCTAGT............................................................................................................. 21 1 2 31.50 63 25 16 14 7 0 0 1
.........................................................AGAGGTAGTAGGTTGCATAGTTGA.......................................................................................................... 24 2 1 31.00 31 11 6 5 9 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGAAT........................................................................................................... 23 2 1 30.00 30 4 16 9 1 0 0 0
.........................................................AGAGGTAGTAGGTTGTATAGTTA........................................................................................................... 23 2 4 29.50 118 56 12 29 20 0 0 1
.........................................................AGAGGTAGTAGCTTGCATAGTTT........................................................................................................... 23 1 1 29.00 29 29 0 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTACATAGTT............................................................................................................ 22 1 1 29.00 29 10 8 5 6 0 0 0
.........................................................AGAGTTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 28.00 28 14 8 1 5 0 0 0
...............................................................................................................CTATACGACCTGCTGCCTTTCATC.................................................... 24 2 1 27.00 27 0 0 0 0 17 10 0
.........................................................AGAGGTAGTAGGTTGCATAGTTAAA......................................................................................................... 25 2 1 27.00 27 6 7 4 8 2 0 0
.........................................................AGAGGTAGTACGTTGCATAGTT............................................................................................................ 22 1 1 27.00 27 10 3 2 3 0 0 9
.........................................................AGAGGTAGTAGGTTGCATATTA............................................................................................................ 22 2 2 27.00 54 14 22 0 17 0 0 1
.........................................................AGAGGTAGTAGCTTGCATAGTTA........................................................................................................... 23 2 1 26.00 26 24 0 1 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATCGTTT........................................................................................................... 23 1 1 26.00 26 14 5 2 4 0 0 1
.........................................................AGAGGTAGTAGATTGCATAGT............................................................................................................. 21 1 1 26.00 26 19 1 6 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTC............................................................................................................ 22 1 1 26.00 26 13 4 6 2 0 0 1
.........................................................AGAGGTAGCAGGTTGCATAGTT............................................................................................................ 22 1 2 25.50 51 25 7 8 7 0 0 4
.........................................................AGAGGTAGTAGCTTGCATAGT............................................................................................................. 21 1 1 25.00 25 25 0 0 0 0 0 0
.........................................................AGAGGTAGTAGGGTGCATAGTTA........................................................................................................... 23 2 1 25.00 25 8 3 11 2 0 0 1
.........................................................AGAGGTCGTAGGTTGCATAGTT............................................................................................................ 22 1 1 24.00 24 15 1 7 0 0 0 1
.........................................................AGAGGAAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 24.00 24 7 6 4 3 0 0 4
.........................................................AGAGGTATTAGGTTGCATAGTT............................................................................................................ 22 1 1 24.00 24 12 4 4 4 0 0 0
.........................................................AAAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 24.00 24 12 2 5 5 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTATATC....................................................................................................... 27 3 1 24.00 24 0 0 0 0 19 5 0
.........................................................AGAGGTAGTAGGTTGCATATTTATC......................................................................................................... 25 3 1 24.00 24 0 0 0 0 18 6 0
..........................................................GAGGTAGTAGGTTGCATAGTTA........................................................................................................... 22 1 1 23.00 23 13 5 4 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTAG.......................................................................................................... 24 2 1 23.00 23 12 3 3 4 0 0 1
.........................................................TGAGGTAGTAGGTTGCATAGTTA........................................................................................................... 23 2 4 22.00 88 30 6 38 11 0 0 3
.........................................................AGAGGTAGTAGATTGCATAGTTA........................................................................................................... 23 2 1 22.00 22 17 3 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTTC......................................................................................................... 25 1 1 22.00 22 0 0 0 0 11 11 0
.........................................................AGAGGTAGAAGGTTGCATAGTT............................................................................................................ 22 1 1 22.00 22 8 3 6 4 0 0 1
.........................................................CGAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 22.00 22 4 1 17 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCCTAGTTT........................................................................................................... 23 1 2 21.50 43 12 5 12 14 0 0 0
.........................................................AGAGGTAGTAGGTTGCATATTTAA.......................................................................................................... 24 3 1 21.00 21 4 11 0 6 0 0 0
.........................................................AGAGGTAGTAGGTTGAATAGTT............................................................................................................ 22 1 1 21.00 21 9 6 1 4 0 0 1
.........................................................AGAGGTAGTAGGGTGCATAGTTT........................................................................................................... 23 1 1 21.00 21 6 6 5 3 0 0 1
.........................................................AGAGGTAGTAGGTTGCATAGTG............................................................................................................ 22 1 2 20.50 41 13 10 14 4 0 0 0
.........................................................AGAGGTACTAGGTTGCATAGTT............................................................................................................ 22 1 1 20.00 20 14 4 1 0 0 0 1
.........................................................TGAGGTAGTAGGTTGCATAGT............................................................................................................. 21 1 4 19.75 79 27 14 27 11 0 0 0
.........................................................AGAGGTAGTAGTTTGTATAGTT............................................................................................................ 22 2 8 19.63 157 129 14 2 12 0 0 0
.........................................................AGAAGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 19.00 19 7 7 2 2 0 0 1
.........................................................AGAGGTAATAGGTTGCATAGTT............................................................................................................ 22 1 1 19.00 19 7 4 4 3 0 0 1
.........................................................AGAGGTAGTAAGTTGCATAGTT............................................................................................................ 22 1 1 19.00 19 6 0 9 2 0 0 2
.........................................................AGAGGTAGTAGGTTGCATAGTTTTATC....................................................................................................... 27 2 1 18.00 18 0 0 0 0 12 6 0
.........................................................AGAGGTGGTAGGTTGCATAGT............................................................................................................. 21 1 1 18.00 18 9 3 4 2 0 0 0
...........................................................AGGTAGTAGGTTGCATAGTT............................................................................................................ 20 0 1 18.00 18 11 3 1 2 0 0 1
.........................................................TGAGGTAGTAGGTTGCATAGTTT........................................................................................................... 23 1 4 17.25 69 27 6 15 21 0 0 0
.........................................................AGAGGTGGTAGGTTGCATAGTTA........................................................................................................... 23 2 1 17.00 17 7 3 3 4 0 0 0
................................................................................................................TATACGACCTGCTGCCTTTCTATC................................................... 24 3 1 17.00 17 0 0 0 0 12 5 0
.........................................................AGAGGTAGTAGGTTGCATGGT............................................................................................................. 21 1 1 17.00 17 9 5 1 2 0 0 0
.........................................................AGAGGTAGTTGGTTGCATAGTT............................................................................................................ 22 1 1 16.00 16 11 1 2 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTAAA.......................................................................................................... 24 3 1 16.00 16 7 2 4 3 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGGTATC......................................................................................................... 25 3 1 15.00 15 0 0 0 0 8 7 0
.........................................................AGAGCTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 15.00 15 9 3 2 1 0 0 0
.........................................................AGAGGTAGTAGGTTTCATAGTTATC......................................................................................................... 25 3 1 15.00 15 0 0 0 0 11 4 0
.........................................................AGAGGTAGTAGGTTGTATATTT............................................................................................................ 22 2 5 14.60 73 24 18 1 30 0 0 0
.........................................................AGAGATAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 14.00 14 5 0 5 4 0 0 0
.........................................................AGAGGTGGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 14.00 14 7 1 2 4 0 0 0
.........................................................AGAGGGAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 14.00 14 2 2 4 5 0 0 1
.........................................................AGAGGTAGTAGGTTGCATGGTTT........................................................................................................... 23 1 1 14.00 14 7 3 3 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTAA......................................................................................................... 25 1 1 14.00 14 5 3 2 4 0 0 0
.........................................................ACAGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 2 14.00 28 14 4 2 8 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTCT.......................................................................................................... 24 1 1 14.00 14 6 1 3 4 0 0 0
.........................................................AGAGGTAGTAGGTTGC.................................................................................................................. 16 0 2 13.50 27 2 9 10 6 0 0 0
.........................................................AGAGGTAGTAGGTTGCAAAGTT............................................................................................................ 22 1 1 13.00 13 7 0 5 1 0 0 0
.........................................................AGAGGTTGTAGGTTGCATAGTT............................................................................................................ 22 1 1 13.00 13 4 3 5 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCCTCGTT............................................................................................................ 22 2 2 12.00 24 20 3 0 1 0 0 0
.......................................................AAAGAGGTAGTAGGTTGCATAGTTT........................................................................................................... 25 1 1 12.00 12 3 4 2 1 0 0 2
.........................................................AGAGGTAGTATGTTGCATAGT............................................................................................................. 21 1 1 12.00 12 5 2 2 2 0 0 1
.........................................................AGAGGTAGTAGGTTGCGTAGTTT........................................................................................................... 23 1 1 12.00 12 5 2 3 1 0 0 1
.........................................................AGAGGTAGTAGGTTGCATATTTTT.......................................................................................................... 24 1 1 12.00 12 2 4 0 6 0 0 0
.........................................................AGAGGTAGTAGGTTGCGTAGTTA........................................................................................................... 23 2 1 12.00 12 4 2 1 5 0 0 0
.........................................................AGAGGTAGTAGGGTGCATAGT............................................................................................................. 21 1 2 11.50 23 10 1 11 1 0 0 0
.........................................................AGAGGTAGTAGATTGCATAGTTT........................................................................................................... 23 1 1 11.00 11 10 0 1 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCACAGT............................................................................................................. 21 1 1 11.00 11 8 0 2 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATATTTAT.......................................................................................................... 24 2 1 11.00 11 5 4 0 2 0 0 0
.........................................................AGAGGTAGTATGTTGCATAGTTT........................................................................................................... 23 1 1 11.00 11 5 3 1 1 0 0 1
.........................................................AGAGGTAGTAGTTTGCATAG.............................................................................................................. 20 1 1 11.00 11 8 2 0 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAAA............................................................................................................. 21 2 5 10.80 54 7 25 9 12 0 0 1
.........................................................AGAGGTAGTAGGTTGTATAG.............................................................................................................. 20 1 4 10.25 41 18 9 9 5 0 0 0
.........................................................AGAGGCAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 10.00 10 3 0 1 1 0 0 5
.........................................................AGAGGTAGGAGGTTGCATAGT............................................................................................................. 21 1 1 10.00 10 4 3 3 0 0 0 0
.........................................................AGAGGTAGTAGGATGCATAGTT............................................................................................................ 22 1 2 10.00 20 7 2 6 4 0 0 1
.........................................................AGAGGTAGTAGGTTGCATGGTTA........................................................................................................... 23 2 1 10.00 10 4 2 4 0 0 0 0
.........................................................AGAGGAAGTAGGTTGCATAGT............................................................................................................. 21 1 1 10.00 10 2 1 2 3 0 0 2
.........................................................AGAGGTAGTAGGTTCCATAGTTA........................................................................................................... 23 2 1 10.00 10 7 1 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTTTT........................................................................................................ 26 2 1 10.00 10 0 1 1 7 1 0 0
.........................................................AGAGGTAGTAGGGTGCATAGTTATC......................................................................................................... 25 3 2 9.50 19 0 0 0 0 11 8 0
.........................................................AGAGGTAGTAGGTTGCATCGTTA........................................................................................................... 23 2 1 9.00 9 3 2 2 2 0 0 0
.........................................................AGAGGTAGTAGGTTCCATAGTTT........................................................................................................... 23 1 1 9.00 9 5 1 1 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAAT............................................................................................................. 21 1 1 9.00 9 2 6 0 1 0 0 0
.........................................................AGCGGTAGTAGGTTGCATAGTTA........................................................................................................... 23 2 1 9.00 9 5 0 3 0 0 0 1
.........................................................AGAGGTAGTAGGTTTCATAGTA............................................................................................................ 22 2 2 9.00 18 3 8 1 4 0 0 2
..........................................................GAGGTAGTAGGTTGCATAGTTATC......................................................................................................... 24 2 1 9.00 9 0 0 0 0 8 1 0
.........................................................AGAGGTAGTAGGTTGCGTAGT............................................................................................................. 21 1 1 9.00 9 2 3 1 3 0 0 0
.........................................................AGACGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 9.00 9 5 1 0 0 0 0 3
.........................................................AGAGGTAGTAGGTTGCATAGTATT.......................................................................................................... 24 1 1 9.00 9 1 1 1 1 3 2 0
.........................................................AGAGGTAGTAGGTAGCATAGTT............................................................................................................ 22 1 1 9.00 9 4 2 3 0 0 0 0
...............................................................................................................CTATACGACCTGCTGCCTTTC....................................................... 21 0 1 9.00 9 2 3 4 0 0 0 0
.........................................................TGAGGTAGTAGGTTGCATAGTATC.......................................................................................................... 24 3 4 8.75 35 0 0 0 0 27 8 0
.........................................................AGAGGTAGTAGGTTGCATAGTGA........................................................................................................... 23 2 2 8.50 17 5 4 2 5 0 0 1
.........................................................AGAGGTAGTAGGTTGCCTAG.............................................................................................................. 20 1 2 8.50 17 6 5 2 4 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGGATC.......................................................................................................... 24 3 1 8.00 8 0 0 0 0 3 5 0
.........................................................AGCGGTAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 8.00 8 3 5 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTGT........................................................................................................... 23 1 1 8.00 8 0 2 5 1 0 0 0
.........................................................AGAGGTAGTAGGTCGCATAGTTA........................................................................................................... 23 2 1 8.00 8 0 1 5 1 0 0 1
.........................................................AGAGGTAGTAGGTTGCATATTAT........................................................................................................... 23 2 1 8.00 8 0 6 0 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTTA......................................................................................................... 25 0 1 8.00 8 0 2 1 4 1 0 0
.......................................................AAAGAGGTAGTAGGTTGCATAGT............................................................................................................. 23 1 1 8.00 8 5 1 0 2 0 0 0
.........................................................AGAGGTAGTAGGCTGCATAGTTA........................................................................................................... 23 2 1 8.00 8 2 0 4 2 0 0 0
.........................................................AGCGGTAGTAGGTTGCATAG.............................................................................................................. 20 1 1 8.00 8 3 3 1 0 0 0 1
.........................................................AGAGGTAGTAGGTTGCTTAGT............................................................................................................. 21 1 1 8.00 8 4 2 2 0 0 0 0
.........................................................AGAGGTAGTAGTTTGCACAGTT............................................................................................................ 22 2 4 7.50 30 24 1 2 3 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGAAA........................................................................................................... 23 3 9 7.22 65 12 22 16 14 0 0 1
.........................................................AGAGGTAGTAGGTTGCATCGT............................................................................................................. 21 1 1 7.00 7 4 3 0 0 0 0 0
.........................................................AGAGGTAGCAGGTTGCATAGTTT........................................................................................................... 23 1 1 7.00 7 4 3 0 0 0 0 0
...............................................................................................................CTATACGACCTGCTGCCTTTCA...................................................... 22 1 1 7.00 7 2 1 2 2 0 0 0
...........................................................AGGTAGTAGGTTGCATAGTTA........................................................................................................... 21 1 1 7.00 7 5 1 0 1 0 0 0
.........................................................ATAGGTAGTAGGTTGCATAGT............................................................................................................. 21 1 1 7.00 7 3 2 0 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGATA........................................................................................................... 23 2 1 7.00 7 4 2 1 0 0 0 0
.........................................................AGCGGTAGTAGGTTGCATAGT............................................................................................................. 21 1 1 7.00 7 1 2 1 3 0 0 0
........................................................TAGAGGTAGTAGGTTGCATAGT............................................................................................................. 22 1 1 7.00 7 4 0 1 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAATT............................................................................................................ 22 1 1 7.00 7 3 0 1 3 0 0 0
.........................................................GGAGGTAGTAGGTTGCATAGTTA........................................................................................................... 23 2 1 7.00 7 3 1 1 2 0 0 0
.........................................................AGAGGGAGTAGGTTGCATAGT............................................................................................................. 21 1 1 7.00 7 2 1 0 1 0 0 3
.........................................................AGAGGTAGTAGGTTGCATAGTTTC.......................................................................................................... 24 1 1 7.00 7 1 1 0 1 4 0 0
........................................................TAGAGGTAGTAGGTTGCATAG.............................................................................................................. 21 1 1 7.00 7 1 2 3 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATTGT............................................................................................................. 21 1 1 7.00 7 5 1 1 0 0 0 0
.........................................................AGAGGTACTAGGTTGCATAGTTA........................................................................................................... 23 2 1 7.00 7 2 2 3 0 0 0 0
.........................................................AGAGGTAGTATGTTGCATATTT............................................................................................................ 22 2 2 6.50 13 7 3 0 3 0 0 0
.........................................................AGAGGTAGTAGTTTGCATAGTTATC......................................................................................................... 25 3 2 6.50 13 0 0 0 0 8 5 0
...............................................................................................................CTATACGACCTGCTGCCTTT........................................................ 20 0 1 6.00 6 0 4 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATTTTT............................................................................................................ 22 2 1 6.00 6 4 1 0 1 0 0 0
.........................................................AGAGGTAGTAGGGTGCATAGTATC.......................................................................................................... 24 3 1 6.00 6 0 0 0 0 2 4 0
.........................................................AGGGGTAGTAGGTTGCATAGTTA........................................................................................................... 23 2 1 6.00 6 2 2 1 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAATC............................................................................................................ 22 2 1 6.00 6 0 0 0 0 2 4 0
...............................................................................................................CTATACGACCTGCTGCCTTTATC..................................................... 23 2 1 6.00 6 0 0 0 0 5 1 0
.........................................................AGAGGTAGTCGGTTGCATAGTTT........................................................................................................... 23 1 1 6.00 6 1 3 0 2 0 0 0
.........................................................AGAGGTATTAGGTTGCATAGTTATC......................................................................................................... 25 3 1 6.00 6 0 0 0 0 6 0 0
.........................................................AGAGGTAGTAGGTTGCACAGTTT........................................................................................................... 23 1 1 6.00 6 2 1 1 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGAATT.......................................................................................................... 24 2 1 6.00 6 1 3 0 1 1 0 0
.........................................................AGAGGTAGTAGGCTGCATAGTTT........................................................................................................... 23 1 1 6.00 6 5 0 1 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGC............................................................................................................. 21 1 1 6.00 6 4 0 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATTGTTT........................................................................................................... 23 1 1 6.00 6 4 0 1 1 0 0 0
.........................................................AGAGGAAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 6.00 6 3 0 0 2 0 0 1
.........................................................AGAGGTAGTAGGTTACATAGTTT........................................................................................................... 23 1 1 6.00 6 1 4 1 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGATT........................................................................................................... 23 1 1 6.00 6 0 2 1 1 2 0 0
.........................................................CGAGGTAGTAGGTTGCATAGTTATC......................................................................................................... 25 3 1 6.00 6 0 0 0 0 6 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTTAATC....................................................................................................... 27 3 1 6.00 6 0 0 0 0 4 2 0
.........................................................AGTGGTAGTAGGTTGCATAGTT............................................................................................................ 22 1 1 6.00 6 4 1 1 0 0 0 0
.........................................................AGAGGTAGTACGTTGCATAGT............................................................................................................. 21 1 1 6.00 6 2 1 0 2 0 0 1
.........................................................AGAGGTAGTAGGTTGCATATTTG........................................................................................................... 23 2 1 6.00 6 2 2 0 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTCA.......................................................................................................... 24 2 1 6.00 6 3 2 1 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTCT........................................................................................................... 23 1 1 6.00 6 2 2 0 2 0 0 0
.........................................................AGAGGTAGTAGGTTGGATAGT............................................................................................................. 21 1 1 6.00 6 3 1 2 0 0 0 0
.........................................................AGAGGTAGTAGGTCGCATAGTTT........................................................................................................... 23 1 1 6.00 6 3 1 1 1 0 0 0
........................................................AAGAGGTAGTAGGTTGCATAG.............................................................................................................. 21 0 1 6.00 6 2 2 0 2 0 0 0
.........................................................AGAGGTAGTAGGTTTCATAGTTG........................................................................................................... 23 2 1 6.00 6 4 0 0 2 0 0 0
........................................................AAGAGGTAGTAGGTTGCATAGTTA........................................................................................................... 24 1 1 6.00 6 0 3 2 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTAAT.......................................................................................................... 24 2 1 6.00 6 1 2 1 2 0 0 0
.........................................................AGAGGTAGTAGGTCGCATAGT............................................................................................................. 21 1 1 6.00 6 2 0 3 0 0 0 1
.........................................................AGAGGTAGTAGGTTGCAAA............................................................................................................... 19 1 3 5.67 17 1 9 1 6 0 0 0
.........................................................AGAGGTAGTATGTTGCATAGTTA........................................................................................................... 23 2 2 5.50 11 8 2 1 0 0 0 0
.........................................................AGAGGTAGTAGGTTGTATTGTT............................................................................................................ 22 2 6 5.33 32 14 6 0 12 0 0 0
.........................................................AGAGGTAGTAGGTTGCGTGGTT............................................................................................................ 22 2 3 5.33 16 12 1 0 3 0 0 0
.........................................................AGAGGTAGTAGGTTGCCTAGTATC.......................................................................................................... 24 3 3 5.33 16 0 0 0 0 13 3 0
.........................................................AGAGGTAGTAGGTTGGATAGTTA........................................................................................................... 23 2 1 5.00 5 2 2 0 1 0 0 0
..........................................................GAGGTAGTAGGTTGCATAGTTT........................................................................................................... 22 0 1 5.00 5 3 0 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGAG............................................................................................................ 22 2 2 5.00 10 3 3 2 1 0 0 1
.........................................................AGAGGTAGTAGGTTGCCTAGTTTT.......................................................................................................... 24 1 1 5.00 5 4 1 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGGTT........................................................................................................... 23 1 1 5.00 5 1 1 1 2 0 0 0
.........................................................AGAGGTAGTAGGTTGGATAGTTT........................................................................................................... 23 1 1 5.00 5 2 1 0 1 0 0 1
.........................................................ATAGGTAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 5.00 5 0 1 0 4 0 0 0
.........................................................AGAGGTAGTACGTTGCATAGTTT........................................................................................................... 23 1 1 5.00 5 2 1 0 0 0 0 2
.........................................................AGAGGTAGTAGGTTGCATAGTTTG.......................................................................................................... 24 1 1 5.00 5 2 1 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTTAC.......................................................................................................... 24 2 1 5.00 5 0 1 1 0 2 1 0
.........................................................AGAGGTAGTAGGTTGCATAGCTT........................................................................................................... 23 1 1 5.00 5 3 1 1 0 0 0 0
.........................................................AGAGGTAGTAGATTGCATAG.............................................................................................................. 20 1 1 5.00 5 5 0 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGCTA........................................................................................................... 23 2 1 5.00 5 3 0 1 1 0 0 0
.........................................................AGAGGTAGTAGGTTGTATAGTA............................................................................................................ 22 2 4 5.00 20 8 6 1 5 0 0 0
.........................................................AGAGGTAGTAGGGTGCATAG.............................................................................................................. 20 1 2 5.00 10 5 3 2 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGTATA.......................................................................................................... 24 2 1 5.00 5 1 3 0 1 0 0 0
.......................................................AAAGAGGTAGTAGGTTGCATAGTTA........................................................................................................... 25 2 1 5.00 5 3 2 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCGTAGTA............................................................................................................ 22 2 1 5.00 5 2 1 0 2 0 0 0
.........................................................AGAGGTAGTAGGTTGCATATC............................................................................................................. 21 2 1 5.00 5 0 0 0 0 1 4 0
.........................................................AGAGGTAGTAGGTTGCATGGTTATC......................................................................................................... 25 3 1 5.00 5 0 0 0 0 5 0 0
.........................................................CGAGGTAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 5.00 5 2 0 3 0 0 0 0
........................................................AAGAGGTAGTAGGTTGCATAGTTT........................................................................................................... 24 0 1 5.00 5 3 0 0 1 0 0 1
.........................................................TGAGGTAGTAGGTTGCATAG.............................................................................................................. 20 1 4 5.00 20 8 4 7 1 0 0 0
.........................................................AGAGGTAGTAGGTTGCATAGATATC......................................................................................................... 25 3 1 5.00 5 0 0 0 0 4 1 0
.........................................................AGAGGTTGTAGGTTGCATAGTTA........................................................................................................... 23 2 1 5.00 5 2 2 1 0 0 0 0
.........................................................AGAGGTAGTAGGTTTCATATTTT........................................................................................................... 23 2 4 4.75 19 11 6 0 2 0 0 0
.........................................................AGAGGCAGTAGGTTGCATAGTTA........................................................................................................... 23 2 2 4.50 9 3 0 1 2 0 0 3
.........................................................AGAGGTAGGAGGTTGCATAGTATC.......................................................................................................... 24 3 2 4.50 9 0 0 0 0 4 5 0
.........................................................AGAGGCAGTAGGTTGCATAGT............................................................................................................. 21 1 2 4.50 9 4 0 1 2 0 0 2
.........................................................AGAGGTAGCAGGTTGCATAGT............................................................................................................. 21 1 2 4.50 9 3 3 1 2 0 0 0
.........................................................AGAGGTATTAGGTTGCATAGTTA........................................................................................................... 23 2 1 4.00 4 3 1 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCATATTTTTT......................................................................................................... 25 2 1 4.00 4 0 0 0 4 0 0 0
.........................................................AGAGGTAGTCGGTTGCATAGTTA........................................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0 0
.........................................................AGGGGTAGTAGGTTGCATAGTTT........................................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0 0
.........................................................AGAGGTAGTAGGTTGCTTAGTTT........................................................................................................... 23 1 1 4.00 4 1 1 1 1 0 0 0
.........................................................AGAGGTAGGAGGTTGCATAGTTT........................................................................................................... 23 1 1 4.00 4 0 1 2 1 0 0 0
.........................................................AGAGGTAGTTGGTTGCATAGTTT........................................................................................................... 23 1 1 4.00 4 1 0 1 2 0 0 0
.........................................................AGAGGTAGTAGGCTGCATAGT............................................................................................................. 21 1 2 4.00 8 0 2 4 2 0 0 0
.........................................................AGAGGAAGTAGGTTGCATAG.............................................................................................................. 20 1 1 4.00 4 1 1 0 1 0 0 1
.........................................................AAAGGTAGTAGGTTGCATAGTTA........................................................................................................... 23 2 1 4.00 4 0 3 0 1 0 0 0
.........................................................AGAGGTAGTAGGTCGCATAGTTATC......................................................................................................... 25 3 1 4.00 4 0 0 0 0 2 2 0
.........................................................AGCGGTAGTAGGTTGCATAGTTATC......................................................................................................... 25 3 1 4.00 4 0 0 0 0 2 2 0
...........................................................AGGTAGTAGGTTGCATAGTTATC......................................................................................................... 23 2 2 4.00 8 0 0 0 0 5 3 0
.........................................................AGAGGTAGTAGGTTGCGTTGTT............................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0 0

Anti-sense strand reads

AACTTCACGTAGACGGTTCATCTTCTGGTCGTTCTTTTTTTTTTACCCAAGGATCCTTCTCCATCATCCAACGTATCAAAATCCCGTCCCTAAAACGGGTGTTCCTCCATTGATATGCTGGACGACGGAAAGAATCCCGGAATAATAAGTTGCCATTGGACAAAGGAACGATGAAACGAAACCACAT

***************************************((((((.((((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))).))))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:11 PM