ID:

mml-let-7c

Coordinate:

chr3:30457097-30457180 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.5 -43.5 -43.5

Sense Strand Reads

AGCTGACTGAAGATATGATAAGGAGTTTGAAGCAACTTTGGAAGCTGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCCTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACTTGAGCCATCGAGGAATTCTTCATCACTTTAACCTGATCGAGCCAC

***********************************...(((.....((((((.((((((..(((.(((.(((((((((((((..((.((.((...)).)).))))))))))))))).))).)))..)))))))))))).....)))...***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex
SRR116841

prostate
SRR116840

epididymis
SRR116842

seminal vesicle
SRR116845

epididymis
SRR116844

epididymis
SRR116839

testes
............................................................TGAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 0 1 755553.00 755553 321344 174491 136868 113887 5 6 8952
............................................................TGAGGTAGTAGGTTGTATGGTTT..................................................................................................... 23 0 1 76073.00 76073 28490 19793 15465 11364 1 3 957
............................................................TGAGGTAGTAGGTTGTATGGT....................................................................................................... 21 0 1 75904.00 75904 25397 16023 19932 13677 1 2 872
............................................................TGAGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 1 1 71443.00 71443 24660 19208 14035 12511 34 5 990
............................................................TGAGGTAGTAGGTTGTATGGTTATC................................................................................................... 25 3 2 42572.00 85144 2 0 1 1 61758 23381 1
............................................................TGAGGTAGTAGGTTGTGTGGTTTATC.................................................................................................. 26 3 2 33418.00 66836 0 0 0 0 60117 6719 0
............................................................TGAGGTAGTAGGTTGTATGTTT...................................................................................................... 22 1 1 30130.00 30130 13081 10160 6499 85 0 0 305
............................................................TGAGGTAGTAGGTTGTATGGTA...................................................................................................... 22 1 1 24121.00 24121 5878 6258 7360 4325 14 6 280
............................................................TGAGGTAGTAGGTTGTATGGTATC.................................................................................................... 24 2 2 14304.50 28609 0 0 0 0 18765 9844 0
............................................................TGAGGTAGTAGGTTGTATGGTAA..................................................................................................... 23 2 1 13324.00 13324 3751 3506 3599 2251 7 2 208
............................................................TGAGGTAGTAGGTTGTATGGTTTATC.................................................................................................. 26 2 1 12546.00 12546 0 0 0 0 8063 4483 0
............................................................TGAGGTAGTAGGTTGTATGG........................................................................................................ 20 0 1 8393.00 8393 2491 1744 2486 1564 0 2 106
............................................................TGAGGTAGTAGGTTGTATTGTT...................................................................................................... 22 1 5 8166.60 40833 20271 11397 8499 186 0 0 480
............................................................TGAGGTAGTAGGTTGTGTGGTTAA.................................................................................................... 24 2 2 7492.00 14984 3299 1630 1602 8068 121 13 251
............................................................TGAGGTAGTAGGTTGTATGGTTAATC.................................................................................................. 26 3 1 7438.00 7438 0 0 0 0 4926 2512 0
............................................................TGAGGTAGTAGGTTGTATGGTTAA.................................................................................................... 24 1 1 6023.00 6023 1751 1742 1325 1104 6 7 88
............................................................TGAGGTAGTAGGTTGTATGGTAT..................................................................................................... 23 1 1 5794.00 5794 1262 1393 2034 982 33 4 86
............................................................TGAGGTAGTAGTTTGTATGGTT...................................................................................................... 22 1 1 4950.00 4950 3480 816 549 85 0 0 20
............................................................TGAGGTAGTAGGTTTTATGGTT...................................................................................................... 22 1 1 4394.00 4394 1713 1051 1424 99 0 0 107
............................................................TGAGGTAGTAGGTTGTATGTT....................................................................................................... 21 1 1 3997.00 3997 1573 1098 1238 46 0 0 42
............................................................TGAGGTAGTAGGTTGTGTGGTTTA.................................................................................................... 24 1 2 2925.00 5850 1681 653 543 2855 32 5 81
............................................................TGAGGTAGTAGGTTGTATGTTTA..................................................................................................... 23 2 1 2745.00 2745 1164 899 642 2 0 0 38
............................................................TGAGGTAGTAGGTTGTATGGATC..................................................................................................... 23 2 1 2518.00 2518 0 1 0 0 1639 878 0
............................................................TGAGGTAGTAGGTTGTATGGTTTT.................................................................................................... 24 1 2 2438.50 4877 1279 2313 650 603 2 0 30
............................................................TGAGGTAGTAGGTTGTATGTTTT..................................................................................................... 23 1 1 2435.00 2435 944 841 610 9 0 0 31
............................................................TGAGGTAGTAGGTTGTATGGTTAT.................................................................................................... 24 2 2 2390.50 4781 1556 1280 1035 719 87 38 66
............................................................TGAGGTAGTAGGTTGTTTGGTT...................................................................................................... 22 1 2 2062.50 4125 2797 581 504 143 0 0 100
............................................................TGAGGTAGTAGGTTGTATGGAA...................................................................................................... 22 2 1 1745.00 1745 264 531 588 333 1 0 28
............................................................TGAGGTAGTAGGTTGTATGGA....................................................................................................... 21 1 1 1628.00 1628 286 423 585 318 2 2 12
............................................................TGAGGTAGTAGCTTGTATGGTT...................................................................................................... 22 1 1 1404.00 1404 1354 21 15 13 0 0 1
............................................................TGAGGTAGTAGATTGTATGGTT...................................................................................................... 22 1 3 1277.67 3833 2066 468 523 760 0 0 16
............................................................TGAGGTAGTAGGTTGTATGGTATATC.................................................................................................. 26 3 1 1247.00 1247 0 0 0 0 847 400 0
............................................................TGAGGTAGTAGGTTGTATGTTA...................................................................................................... 22 2 1 1226.00 1226 340 447 428 2 0 0 9
...........................................................TTGAGGTAGTAGGTTGTATGGTT...................................................................................................... 23 0 1 1223.00 1223 495 256 232 221 0 0 19
............................................................TGAGGTAGTAGGTTGTATGGTTTA.................................................................................................... 24 0 1 1219.00 1219 359 381 239 228 2 0 10
............................................................TGAGGTAGTAGGTTGTTTGGTTTATC.................................................................................................. 26 3 1 1215.00 1215 0 0 0 0 1107 108 0
............................................................TGAGGTAGTAGGTTGTATGGTTG..................................................................................................... 23 1 1 1124.00 1124 404 275 171 259 0 0 15
............................................................TGAGGTAGTAGGTTGTATTGTTT..................................................................................................... 23 1 4 952.25 3809 1610 1258 888 15 0 1 37
............................................................TGAGGTAGTAGGTTGTAT.......................................................................................................... 18 0 4 951.00 3804 1203 730 869 950 1 1 50
............................................................TGAGGTAGTAGGTTGTTTGGTTT..................................................................................................... 23 1 2 865.50 1731 1131 269 250 45 0 0 36
...........................................................TTGAGGTAGTAGGTTGTATGGT....................................................................................................... 22 0 1 780.00 780 282 144 182 160 0 0 12
............................................................CGAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 779.00 779 347 181 133 115 0 0 3
............................................................TGAGGTAGTAGGTTGTATTGT....................................................................................................... 21 1 5 762.80 3814 1545 1061 1140 20 0 0 48
............................................................TGAGGTAGTAGGTTGTGTGGTTTAT................................................................................................... 25 2 2 684.00 1368 364 315 106 544 28 3 8
............................................................TGAGGTAGTAGGTTTTATGGT....................................................................................................... 21 1 1 656.00 656 211 147 271 19 0 0 8
............................................................TGAGGTAGTAGGTTGTATGT........................................................................................................ 20 1 1 642.00 642 208 168 235 23 0 0 8
............................................................TGAGGTAGTAGGTTGTATTGTATC.................................................................................................... 24 3 6 633.50 3801 0 0 0 0 161 3640 0
............................................................TGAGGTGGTAGGTTGTATGGTT...................................................................................................... 22 1 1 630.00 630 234 133 124 135 0 0 4
............................................................TGAGGTAGTAGGTTGTACGGTT...................................................................................................... 22 1 1 618.00 618 308 66 45 197 0 0 2
............................................................TGCGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 585.00 585 222 58 98 199 0 0 8
............................................................TGAGGTAGTAGGTTGTATTGTTA..................................................................................................... 23 2 5 559.20 2796 1128 971 631 15 0 1 50
............................................................TGAGGTAGTAGGTTGTATGGAATC.................................................................................................... 24 3 2 534.00 1068 0 0 0 0 684 384 0
............................................................TGAGGTAGTAGGTTGTATG......................................................................................................... 19 0 1 531.00 531 174 71 173 112 0 0 1
............................................................TGAGGCAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 493.00 493 174 75 66 93 0 0 85
............................................................TGAGGTAGTAGGTTGTATGGGT...................................................................................................... 22 1 1 485.00 485 147 96 71 169 0 0 2
............................................................TAAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 454.00 454 191 142 65 54 0 0 2
............................................................TGGGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 445.00 445 136 157 74 73 0 0 5
............................................................TGAGGTAGTAGGTTTTATGGTTT..................................................................................................... 23 1 1 444.00 444 158 121 148 12 0 0 5
............................................................TGAGGTAGTAGGTTGTATGGTTTTT................................................................................................... 25 2 2 432.50 865 54 656 42 91 5 14 3
............................................................TGAGGTAGTCGGTTGTATGGTT...................................................................................................... 22 1 1 390.00 390 176 101 53 54 0 0 6
............................................................TGAGGTAGTGGGTTGTATGGTT...................................................................................................... 22 1 1 382.00 382 205 57 49 70 0 0 1
............................................................TGAGGTAGTAGGTTTTATGGTTA..................................................................................................... 23 2 1 377.00 377 116 114 135 6 0 0 6
............................................................TGAGGTAGTAGGTTGTATTTTT...................................................................................................... 22 2 7 376.29 2634 840 1255 501 8 0 0 30
............................................................TGAGGTAGTAGGTTGTCTGGTT...................................................................................................... 22 1 2 369.50 739 340 164 151 76 1 0 7
............................................................TGAGGTAGTAGGTTGTATGGTG...................................................................................................... 22 1 1 360.00 360 125 60 91 82 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTAAA................................................................................................... 25 2 1 328.00 328 72 101 90 59 0 2 4
............................................................TGAGGTAGTAGGTTGTATGGTTC..................................................................................................... 23 1 1 324.00 324 96 81 58 57 18 11 3
............................................................AGAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 310.00 310 150 67 51 38 0 0 4
.............................................................GAGGTAGTAGGTTGTATGGTT...................................................................................................... 21 0 1 309.00 309 110 90 52 53 0 0 4
............................................................TGAGGTAGTAGGTTGTATGGTAAA.................................................................................................... 24 2 1 292.00 292 61 75 100 45 5 3 3
............................................................TGAGGTAGCAGGTTGTATGGTT...................................................................................................... 22 1 1 291.00 291 139 64 48 36 0 0 4
............................................................TGAGGTAGGAGGTTGTATGGTT...................................................................................................... 22 1 2 290.00 580 370 87 49 71 0 0 3
............................................................TGAGGTAGTAGGTTGTATGGTTATT................................................................................................... 25 3 3 285.00 855 16 30 15 8 373 413 0
............................................................TGAGGTAGTAGGTTGTTTGGTTA..................................................................................................... 23 2 2 283.50 567 339 99 94 18 0 0 17
............................................................TTAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 283.00 283 93 115 42 33 0 0 0
............................................................TGAGGTAGTAGGTTGTATGTTAT..................................................................................................... 23 2 1 282.00 282 77 94 103 2 0 0 6
............................................................TGAGGTAGTAGGTTGTCTGGTTTATC.................................................................................................. 26 3 1 280.00 280 0 0 0 0 257 23 0
............................................................TGAGGTAGTAGGTTGCATGGTT...................................................................................................... 22 1 1 279.00 279 116 60 33 66 0 0 4
............................................................TGAGGTAGTAGGTTGTATGA........................................................................................................ 20 1 1 274.00 274 47 78 103 46 0 0 0
............................................................TGAGGTAGTAGGTCGTATGGTT...................................................................................................... 22 1 1 271.00 271 111 50 50 57 0 0 3
............................................................TGAGGTAGTAGGTTTTATGTTT...................................................................................................... 22 2 3 267.67 803 432 126 227 2 0 0 16
............................................................TCAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 260.00 260 103 115 28 14 0 0 0
............................................................TGAGGTAGTAGGCTGTATGGTT...................................................................................................... 22 1 1 258.00 258 123 36 40 52 0 0 7
............................................................TGAGGTAGTAGGTTGTTTGGT....................................................................................................... 21 1 2 250.50 501 316 56 105 18 0 0 6
............................................................TGAGGTAGTAGGTTGTATTGTA...................................................................................................... 22 2 5 246.40 1232 334 433 437 6 0 6 16
............................................................TGAGGTAGTAGGTTCTATGGTT...................................................................................................... 22 1 1 246.00 246 122 48 43 31 0 0 2
............................................................TGAGGTAGTAGGTTGTGTGGTTAAT................................................................................................... 25 3 2 241.00 482 114 59 37 235 30 2 5
............................................................TGAGGTAGTAGGTTGTA........................................................................................................... 17 0 4 240.00 960 137 133 213 249 73 149 6
............................................................TGATGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 238.00 238 117 40 34 31 0 0 16
............................................................TGAGGTAGTAGGTTGTATGTTTAA.................................................................................................... 24 2 1 229.00 229 93 75 58 1 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTGATC.................................................................................................. 26 3 1 229.00 229 0 0 0 0 157 72 0
............................................................TGAGGTAGTAGGTTGTATGGTTTAA................................................................................................... 25 1 1 227.00 227 60 68 60 33 0 0 6
............................................................TGAGGTAGTAGGTTGTATGGAT...................................................................................................... 22 1 1 224.00 224 25 53 94 48 2 1 1
............................................................TGAGGTCGTAGGTTGTATGGTT...................................................................................................... 22 1 1 223.00 223 109 24 35 52 0 0 3
............................................................TGAGGTAGTAGGTTGTGTGGTTGA.................................................................................................... 24 2 2 222.00 444 92 31 34 280 2 0 5
............................................................TGAGGTAGTAGGTTGTATGGCT...................................................................................................... 22 1 1 221.00 221 97 37 27 58 0 0 2
............................................................TGAGGTAGTAGGTTGTATCGTT...................................................................................................... 22 1 4 217.75 871 419 74 119 246 1 0 12
............................................................TGAGGTAGTAGGTTGTGTGGTATA.................................................................................................... 24 2 2 209.50 419 109 34 37 207 19 4 9
............................................................TGAGGTAGTAGGGTGTATGGTT...................................................................................................... 22 1 1 208.00 208 87 26 25 67 1 0 2
...........................................................TTGAGGTAGTAGGTTGTATGGTATC.................................................................................................... 25 2 1 199.00 199 0 0 0 0 157 42 0
............................................................TGAGGTAGTAGGTTGTATGGTC...................................................................................................... 22 1 1 194.00 194 83 35 22 40 8 1 5
............................................................TGAGGTAGTAGGTTGTATGATC...................................................................................................... 22 2 2 191.50 383 0 0 0 1 205 177 0
............................................................TGAGGTAGTAGGTTGTATGGTAG..................................................................................................... 23 2 1 186.00 186 52 44 45 41 0 0 4
............................................................TGAGGTATTAGGTTGTATGGTT...................................................................................................... 22 1 1 181.00 181 87 36 21 33 0 0 4
............................................................TGAGGTAGTACGTTGTATGGTT...................................................................................................... 22 1 1 179.00 179 64 21 23 22 0 0 49
............................................................TGAGGTAGTAGTTTGTATGGTTT..................................................................................................... 23 1 1 173.00 173 96 40 25 10 0 0 2
............................................................TGAGTTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 172.00 172 78 34 29 25 0 0 6
............................................................TGAGGTAGTAGGTTGTATGGGATC.................................................................................................... 24 3 3 171.33 514 0 0 0 0 230 284 0
............................................................TGAGGAAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 170.00 170 36 34 25 22 0 0 53
............................................................TGAGGTACTAGGTTGTATGGTT...................................................................................................... 22 1 1 158.00 158 84 25 20 25 0 0 4
............................................................TGAGGTAGTAGGTTGTGTGGTAAA.................................................................................................... 24 3 4 157.25 629 130 53 95 317 23 3 8
............................................................TGAGGTAGTAGGTTGTGTGTTTAA.................................................................................................... 24 3 2 150.50 301 168 54 61 5 0 0 13
............................................................TGAGGTAGTAGGTTGTTTGGTAT..................................................................................................... 23 2 2 144.50 289 168 41 56 14 1 0 9
............................................................TGAGGTAGTAGGTTGTATTGTTTATC.................................................................................................. 26 3 2 141.50 283 0 0 0 0 41 242 0
............................................................TGAGGTAGTAGTTTGTATGGTTA..................................................................................................... 23 2 1 138.00 138 73 36 23 6 0 0 0
............................................................TGAGGTAGTAGGTGGTATGGTT...................................................................................................... 22 1 1 135.00 135 55 34 23 23 0 0 0
............................................................TGAGGTAGTAGGTTGTTTGGTTAA.................................................................................................... 24 2 1 134.00 134 70 23 30 6 0 0 5
............................................................TGAGGTAGTAGGTTGTATGTTATC.................................................................................................... 24 3 3 133.33 400 0 0 0 0 282 118 0
..........................................................AATGAGGTAGTAGGTTGTATGGTT...................................................................................................... 24 2 2 133.00 266 103 69 45 46 0 0 3
...........................................................TTGAGGTAGTAGGTTGTATTGTT...................................................................................................... 23 1 1 129.00 129 65 30 31 1 0 0 2
............................................................TGAGGTAGAAGGTTGTATGGTT...................................................................................................... 22 1 1 129.00 129 39 33 21 34 0 0 2
............................................................TGAGGTAGTAGTTTGTATGGT....................................................................................................... 21 1 1 129.00 129 85 26 15 3 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGGTTATC.................................................................................................. 26 3 1 128.00 128 0 0 0 0 41 87 0
............................................................TGAGGTAGTAGGTTGTATGTTAA..................................................................................................... 23 3 5 126.20 631 183 230 210 2 0 0 6
............................................................TGAGGTAGTATGTTGTATGGTT...................................................................................................... 22 1 2 123.00 246 104 51 41 21 0 0 29
...........................................................TTGAGGTAGTAGGTTGTATGGTA...................................................................................................... 23 1 1 122.00 122 34 27 29 32 0 0 0
............................................................TGAGGTAGTAGCTTGTATGGTTT..................................................................................................... 23 1 1 122.00 122 118 3 0 1 0 0 0
............................................................TGAGGTAGTAGGTTTTATTGTT...................................................................................................... 22 2 10 121.60 1216 480 366 341 0 0 0 29
............................................................TGAGGTAGTAGTTTGTATTGTT...................................................................................................... 22 2 11 120.64 1327 926 243 156 1 0 0 1
............................................................TGAGGGAGTAGGTTGTATGGTT...................................................................................................... 22 1 2 119.00 238 28 63 57 65 0 0 25
............................................................TGAGGTAGTAGGTTGTATGGTTTTC................................................................................................... 25 2 2 114.50 229 0 1 0 0 108 120 0
............................................................TGAGGTAGTAGGTTGTATGGTTGA.................................................................................................... 24 1 1 114.00 114 28 38 16 24 1 0 7
............................................................TGAGGTAGTAGCTTGTATGGT....................................................................................................... 21 1 1 113.00 113 105 2 2 4 0 0 0
............................................................TGAGGTAGTAGGTTATATGGTT...................................................................................................... 22 1 1 112.00 112 44 22 19 25 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTTC.................................................................................................... 24 1 2 111.00 222 7 13 7 5 98 92 0
............................................................TGAGGTAGTAGGTTGTATTGTTAA.................................................................................................... 24 2 2 110.50 221 67 89 60 0 1 0 4
............................................................TGAGGTAGTAGGTTGTATGGTATT.................................................................................................... 24 2 2 110.00 220 12 21 22 11 88 66 0
............................................................TGAGGTAGTAGGTTGTATGGTTCTC................................................................................................... 25 3 2 109.50 219 0 0 0 0 153 66 0
............................................................TGAGGTAGTAGGTTGTATGTTTTATC.................................................................................................. 26 3 1 109.00 109 0 0 0 0 86 23 0
............................................................TGAGGTAGTTGGTTGTATGGTT...................................................................................................... 22 1 1 108.00 108 34 26 15 31 0 0 2
............................................................TGAGGTAGTAGGTTGGATGGTT...................................................................................................... 22 1 1 108.00 108 27 11 15 52 0 0 3
............................................................TGAGGTAGTAGCTTGTATGGTTA..................................................................................................... 23 2 1 105.00 105 103 1 0 1 0 0 0
............................................................TGAGGTAGTAGATTGTATGGTTT..................................................................................................... 23 1 2 104.00 208 103 41 25 39 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTGA..................................................................................................... 23 2 1 103.00 103 28 26 21 25 0 0 3
............................................................TGAGGTAGTAGGTTGTGTGGTTTATT.................................................................................................. 26 3 2 103.00 206 9 8 11 36 112 30 0
............................................................TGTGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 101.00 101 33 23 17 28 0 0 0
..............................................................AGGTAGTAGGTTGTATGGTT...................................................................................................... 20 0 1 101.00 101 41 28 20 12 0 0 0
............................................................TGAGGTAGTAGGTTGTATGCTT...................................................................................................... 22 1 1 101.00 101 63 15 9 14 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTTTAT................................................................................................... 25 1 1 100.00 100 24 48 11 14 2 1 0
............................................................TGAGGTAGTAGGTTGTATTG........................................................................................................ 20 1 5 99.40 497 198 116 177 2 0 0 4
............................................................TGAGGTAGTAGGTTGTTTGGTTTT.................................................................................................... 24 2 3 99.00 297 172 69 39 11 0 0 6
............................................................TGAAGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 97.00 97 32 20 18 20 0 0 7
...........................................................TTGAGGTAGTAGGTTGTATGGTTATC................................................................................................... 26 3 1 96.00 96 0 0 0 0 82 14 0
............................................................CGAGGTAGTAGGTTGTATGGT....................................................................................................... 21 1 1 95.00 95 33 18 27 14 0 0 3
............................................................CGAGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 94.00 94 34 28 23 9 0 0 0
............................................................TGAGGTAGTAGGTTTTATGGTTTATC.................................................................................................. 26 3 1 91.00 91 0 0 0 0 57 34 0
............................................................TGAGGTAGTAGGTTTTATGGTA...................................................................................................... 22 2 2 90.50 181 39 45 87 5 0 0 5
............................................................TGAGGTAGTAGGTTGTATGGTGT..................................................................................................... 23 1 1 90.00 90 28 13 24 23 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGAAA..................................................................................................... 23 3 4 90.00 360 84 114 93 64 0 0 5
............................................................TGAGGTAATAGGTTGTATGGTT...................................................................................................... 22 1 1 89.00 89 39 23 9 16 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTTAATC................................................................................................. 27 3 1 89.00 89 0 0 0 0 57 32 0
............................................................TGAGCTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 89.00 89 48 9 18 13 0 0 1
............................................................TGAGGTAGTAGATTGTATGGT....................................................................................................... 21 1 3 86.67 260 119 28 42 71 0 0 0
............................................................CGAGGTAGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 86.00 86 33 26 18 9 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGGTT..................................................................................................... 23 1 1 82.00 82 25 12 19 24 0 0 2
............................................................TGAGGTATTAGGTTGTATGGTTTATC.................................................................................................. 26 3 1 82.00 82 0 0 0 0 53 29 0
.............................................................TAGGTAGTAGGTTGTATGGTT...................................................................................................... 21 1 1 81.00 81 43 19 11 7 0 0 1
............................................................TGACGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 80.00 80 19 11 12 12 0 0 26
............................................................TGAGGTAGTAGATTGTATGGTTA..................................................................................................... 23 2 3 77.67 233 106 37 27 62 0 0 1
............................................................TGAGGTGGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 76.00 76 31 11 12 22 0 0 0
............................................................TGAGGTATTAGGTTGTATGGTATC.................................................................................................... 24 3 2 76.00 152 0 0 0 0 95 57 0
............................................................TGAGGTAGTAGTTTGTATGGTTTATC.................................................................................................. 26 3 1 76.00 76 0 0 0 0 50 26 0
............................................................TGAGGTTGTAGGTTGTATGGTT...................................................................................................... 22 1 1 75.00 75 23 12 11 28 0 0 1
...........................................................CTGAGGTAGTAGGTTGTATGGTT...................................................................................................... 23 1 2 75.00 150 41 30 27 50 0 0 2
............................................................TGAGGTAGGAGGTTGTATGGTTT..................................................................................................... 23 1 1 74.00 74 47 6 12 8 0 0 1
............................................................TGAGGTAGTAGGTTGTATGGAAT..................................................................................................... 23 2 1 74.00 74 13 17 36 7 0 1 0
............................................................TGAGGTAGTAGGTTGTTTGTTT...................................................................................................... 22 2 6 72.17 433 295 88 45 0 0 0 5
............................................................TGAGGTAGTAGGTTGTAAGGTT...................................................................................................... 22 1 1 72.00 72 26 8 14 24 0 0 0
............................................................TGAGGTAGTAGGTTGTTTTGTT...................................................................................................... 22 2 8 71.25 570 395 85 76 1 0 0 13
...........................................................TTGAGGTAGTAGGTTGTATGGTTT..................................................................................................... 24 0 1 71.00 71 26 17 13 13 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTCATC.................................................................................................. 26 3 1 71.00 71 0 0 0 0 56 15 0
............................................................TGAGGTAGTAGCTTGTATGTTT...................................................................................................... 22 2 1 71.00 71 70 1 0 0 0 0 0
............................................................GGAGGTAGTAGGTTGTATGGTT...................................................................................................... 22 1 1 70.00 70 27 14 20 7 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGG....................................................................................................... 21 1 1 70.00 70 23 9 18 18 0 0 2
............................................................TGAGGTAGTAAGTTGTATGGTT...................................................................................................... 22 1 2 70.00 140 67 32 24 13 0 0 4
............................................................TGAGGTAGTAGGTTGTATT......................................................................................................... 19 1 5 68.20 341 94 86 86 73 0 0 2
............................................................TGAGGTGGTAGGTTGTATGGT....................................................................................................... 21 1 1 68.00 68 25 11 13 19 0 0 0
............................................................TGAGGTAGTAGGTTTTATGGTATC.................................................................................................... 24 3 2 67.50 135 0 0 0 0 87 48 0
............................................................TGAGGTAGTAGGTTGGATGGTTTATC.................................................................................................. 26 3 1 67.00 67 0 0 0 0 34 33 0
............................................................TGAGGTAGTAGGTTTTATGTTTT..................................................................................................... 23 2 1 66.00 66 28 12 24 1 0 0 1
...........................................................TTGAGGTAGTAGGTTGTATTGT....................................................................................................... 22 1 1 66.00 66 29 18 19 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATTGTAA..................................................................................................... 23 3 8 64.00 512 163 172 170 0 0 0 7
............................................................TGAGGTAGTAGGTTGTATGATT...................................................................................................... 22 1 1 62.00 62 19 10 17 12 1 3 0
............................................................TGAGGTAGTAGGTTGTATGGTTTTTT.................................................................................................. 26 3 2 60.50 121 2 103 8 8 0 0 0
............................................................TGAGGTAGTAGGTTGTATGTTTTT.................................................................................................... 24 2 2 60.00 120 34 67 17 1 0 0 1
............................................................TGAGGTAGTAGGTTGTATTTTTT..................................................................................................... 23 2 4 59.75 239 61 133 44 0 0 0 1
............................................................TGAGGTAGTAGGTTGTATTGTAT..................................................................................................... 23 2 4 59.75 239 50 80 106 0 0 1 2
............................................................TGAGGTAGTAGTTTGTATGTTT...................................................................................................... 22 2 3 58.67 176 83 47 46 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTTAAC................................................................................................... 25 2 1 58.00 58 2 1 1 2 35 17 0
............................................................TGCGGTAGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 57.00 57 16 3 14 24 0 0 0
............................................................TGAGGTAGTAGGTTGTTTGGTA...................................................................................................... 22 2 2 56.50 113 66 12 27 6 0 0 2
............................................................TGAGGTGGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 56.00 56 23 8 8 17 0 0 0
............................................................TGGGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 56.00 56 13 18 13 12 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTTAG.................................................................................................... 24 2 2 55.00 110 25 41 22 21 0 0 1
............................................................TGAGGTAGTAGGTTGTATGAATC..................................................................................................... 23 3 6 53.17 319 0 0 0 0 207 112 0
............................................................TGGGGTAGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 53.00 53 11 20 9 13 0 0 0
............................................................TGCGGTAGTAGGTTGTATGGT....................................................................................................... 21 1 1 53.00 53 17 4 15 16 0 0 1
............................................................TGAGGTAGTAGGTTGTATGGTTAC.................................................................................................... 24 2 2 53.00 106 4 8 4 5 50 35 0
............................................................TGAGGTAGTAGTTTGTATGGTATC.................................................................................................... 24 3 3 52.67 158 0 0 0 0 102 56 0
............................................................TGCGGTAGTAGGTTGTATGGTATC.................................................................................................... 24 3 2 51.50 103 0 0 0 0 85 18 0
............................................................TGAGGTAGTAGGTTGTGTGGTTAAC................................................................................................... 25 3 2 51.00 102 0 2 0 8 82 10 0
............................................................TGAGGTAGTAGGTTGTCTGGTTT..................................................................................................... 23 1 2 51.00 102 39 27 19 16 0 0 1
............................................................TGAGGTAGTAGGTAGTATGGTT...................................................................................................... 22 1 1 51.00 51 14 11 8 18 0 0 0
............................................................TAAGGTAGTAGGTTGTATGGT....................................................................................................... 21 1 1 51.00 51 21 15 10 5 0 0 0
............................................................TGAGGTAGTCGGTTGTATGGT....................................................................................................... 21 1 1 51.00 51 18 13 9 11 0 0 0
............................................................TGAGGTAGTAGGTTGTATGTTTAT.................................................................................................... 24 3 3 50.67 152 58 45 44 2 0 0 3
............................................................TGCGGTAGTAGGTTGTATGGTTTATC.................................................................................................. 26 3 1 50.00 50 0 0 0 0 32 18 0
............................................................TGAGGCAGTAGGTTGTATGGT....................................................................................................... 21 1 1 50.00 50 18 6 6 14 0 0 6
............................................................TGAGGTAGTAGGTTGTTTGGTTTA.................................................................................................... 24 1 1 49.00 49 30 6 7 4 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTAAAA................................................................................................... 25 3 1 49.00 49 19 12 9 9 0 0 0
............................................................TGAGGTAGTCGGTTGTATGGTTT..................................................................................................... 23 1 1 49.00 49 24 9 12 4 0 0 0
............................................................TGAGGTAGTAGGTTGT............................................................................................................ 16 0 5 48.60 243 11 57 67 107 0 1 0
............................................................TGAGGTAGTAGGTTTTATGG........................................................................................................ 20 1 2 48.50 97 22 22 46 3 0 0 4
............................................................TGAGGTAGTAGGTTGTGTGGTTTAGATC................................................................................................ 28 3 1 48.00 48 0 0 0 0 48 0 0
............................................................TGAGGTAGTAGGTTGTGTGTTTTA.................................................................................................... 24 2 2 46.50 93 67 13 13 0 0 0 0
............................................................TAAGGTAGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 46.00 46 15 23 4 4 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTTAATT.................................................................................................. 26 3 1 46.00 46 1 0 0 0 15 30 0
............................................................TGAGGTAGTAGGTTGTGTGGTTAAAA.................................................................................................. 26 3 2 45.50 91 14 7 13 46 11 0 0
............................................................TGAGGTGGTAGGTTGTATGTTT...................................................................................................... 22 2 1 45.00 45 13 20 12 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTAAT.................................................................................................... 24 3 2 45.00 90 12 26 22 12 7 10 1
............................................................TGAGGTAGTAGATTGTATGTTT...................................................................................................... 22 2 3 44.67 134 85 29 16 3 0 0 1
............................................................TGAGGCAGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 44.00 44 14 8 5 8 0 0 9
............................................................TGAGGTAGTAGGTTGTTTGGTAA..................................................................................................... 23 3 4 44.00 176 97 34 41 3 0 0 1
............................................................TGAGGTAGTAGGTTGTATGGTATA.................................................................................................... 24 1 1 43.00 43 8 9 14 7 3 2 0
............................................................TGAGGTAGTAGGTTGGATGGTATC.................................................................................................... 24 3 2 42.50 85 0 0 0 0 46 39 0
............................................................TGGGGTAGTAGGTTGTATGGT....................................................................................................... 21 1 1 42.00 42 11 13 9 7 0 0 2
............................................................TGAGATAGTAGGTTGTATGGTT...................................................................................................... 22 1 2 41.00 82 30 21 16 15 0 0 0
............................................................TGAGGTAGTAGGATGTATGGTT...................................................................................................... 22 1 2 41.00 82 27 11 21 22 0 0 1
............................................................TGAGGTAGTAGGTTGTATGCTTTATC.................................................................................................. 26 3 1 41.00 41 0 0 0 0 35 6 0
............................................................TGAGGTAGTAGGTTGTTTGGTTAT.................................................................................................... 24 3 5 40.20 201 113 40 28 11 0 0 9
............................................................TGAGGTAGTAGGTTGTATGGTTTATT.................................................................................................. 26 2 1 40.00 40 0 1 0 1 15 23 0
...........................................................TTGAGGTAGTAGGTTGTATGG........................................................................................................ 21 0 1 40.00 40 10 11 12 7 0 0 0
.............................................................GAGGTAGTAGGTTGTATGGTTA..................................................................................................... 22 1 1 40.00 40 8 16 8 7 0 0 1
............................................................TGAGGTAGTAGGTTGTTTGTTTT..................................................................................................... 23 2 4 39.25 157 94 40 17 0 0 0 6
............................................................TGAGGTAGTATGTTGTATGGTATC.................................................................................................... 24 3 2 39.00 78 0 0 0 0 45 33 0
............................................................TGAGGTAGTAGGTTGTGTGGTTTAAA.................................................................................................. 26 2 2 39.00 78 12 6 7 47 4 0 2
............................................................TAAGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 39.00 39 15 14 5 4 0 0 1
............................................................TGAGGTAGTAGGTTGTATGGTTAAT................................................................................................... 25 2 1 39.00 39 7 7 15 2 5 3 0
............................................................TGAGGTAGTAGGTTGTTTTGTTT..................................................................................................... 23 2 5 39.00 195 122 35 31 1 0 0 6
............................................................TGAGGTAGTAGGTTGTATTTT....................................................................................................... 21 2 10 38.60 386 110 156 107 9 0 1 3
............................................................TGAGGTAGTAGGTTGTCTGGT....................................................................................................... 21 1 2 38.50 77 28 19 21 8 0 0 1
............................................................TGAGGTAGTATGTTGTATGGTTTATC.................................................................................................. 26 3 1 38.00 38 0 0 0 0 26 12 0
............................................................TGAGGTAGTAGGTTTTATGGTAT..................................................................................................... 23 2 1 38.00 38 4 11 22 0 0 0 1
.............................................................GAGGTAGTAGGTTGTATGGTTT..................................................................................................... 22 0 1 37.00 37 14 9 8 4 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTTTTC.................................................................................................. 26 3 2 37.00 74 0 0 0 0 40 34 0
............................................................TGAGGTAGTGGGTTGTATGGTTT..................................................................................................... 23 1 1 37.00 37 20 5 7 4 0 0 1
............................................................TGAGGTAGTAGGTTTTATGGTTAA.................................................................................................... 24 2 1 36.00 36 11 7 16 1 0 0 1
............................................................TGAGGTAGTAGGTTGTATGGTAC..................................................................................................... 23 2 1 36.00 36 7 5 8 3 7 6 0
............................................................TGAGGTAGTAGGTTTTTTGGTT...................................................................................................... 22 2 2 36.00 72 42 10 15 3 0 0 2
...........................................................TTGAGGTAGTAGGTTGTATGTTT...................................................................................................... 23 1 1 36.00 36 18 11 7 0 0 0 0
............................................................TGAGGTAGTAGGTTGTACGGT....................................................................................................... 21 1 1 36.00 36 14 6 10 6 0 0 0
............................................................TGAGGTAGTAGGTTGTGTGGTTAAG................................................................................................... 25 2 1 36.00 36 7 2 2 25 0 0 0
............................................................TGCGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 36.00 36 13 5 5 12 0 0 1
............................................................TGAGGTAGCAGGTTGTATGGTTT..................................................................................................... 23 1 1 36.00 36 13 6 9 7 0 0 1
............................................................TGAGGTAGTAGGTTGTATCGTTT..................................................................................................... 23 1 4 35.75 143 52 41 13 34 0 0 3
............................................................TGAGGTAGTAGGTTGTAA.......................................................................................................... 18 1 8 35.63 285 40 69 86 88 0 0 2
............................................................TGAGGTAGTAGGTTGTGTGGTTCA.................................................................................................... 24 2 2 35.50 71 24 3 5 38 1 0 0
............................................................TGAGGTAGTCGGTTGTATGGTTA..................................................................................................... 23 2 1 35.00 35 11 12 6 6 0 0 0
............................................................TGAGGTAGTAGGTTGAATGGTT...................................................................................................... 22 1 1 35.00 35 12 4 2 17 0 0 0
............................................................TGAGGTAGTAGGTTGTACGGTTT..................................................................................................... 23 1 1 35.00 35 19 7 4 5 0 0 0
............................................................TGAGGTAGTGGGTTGTATGGTTA..................................................................................................... 23 2 1 35.00 35 18 10 2 5 0 0 0
............................................................TGAGGTAGTAGGTTGTATTGATC..................................................................................................... 23 3 8 34.88 279 0 0 0 0 8 271 0
............................................................TGAGGTAGTAGGTTGCATGGTTT..................................................................................................... 23 1 1 34.00 34 16 8 6 4 0 0 0
............................................................AGAGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 33.00 33 11 12 4 6 0 0 0
............................................................TTAGGTAGTAGGTTGTATGGT....................................................................................................... 21 1 1 33.00 33 7 10 7 9 0 0 0
............................................................TGAGGTCGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 33.00 33 12 4 6 8 0 0 3
............................................................CGAGGTAGTAGGTTGTATGGTA...................................................................................................... 22 2 1 33.00 33 9 10 8 6 0 0 0
............................................................TGAGGTAGCAGGTTGTATGGTTA..................................................................................................... 23 2 1 33.00 33 12 12 3 5 0 0 1
............................................................TGAGGTAGTAGGTTGTATGTATC..................................................................................................... 23 3 5 32.80 164 0 0 0 0 118 46 0
............................................................TGAGGTAGTAGGTTGTTTGG........................................................................................................ 20 1 3 32.67 98 53 13 20 6 0 2 4
............................................................TGAGGTAGTCGGTTGTCTGGTT...................................................................................................... 22 2 2 32.50 65 34 18 13 0 0 0 0
............................................................TTAGGTAGTAGGTTGTATGGTTA..................................................................................................... 23 2 1 32.00 32 11 13 2 6 0 0 0
............................................................TGAGGTAGTAGGTTGTCTGGTTA..................................................................................................... 23 2 2 32.00 64 25 19 12 8 0 0 0
............................................................TGAGGTAGTAGGTTGTATCGTTTATC.................................................................................................. 26 3 2 32.00 64 0 0 0 0 55 9 0
............................................................TGAGGTAGTAGGCTGTATGGT....................................................................................................... 21 1 1 32.00 32 15 8 2 5 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTAAAA.................................................................................................. 26 2 1 32.00 32 5 11 6 10 0 0 0
............................................................TGAGTTAGTAGGTTGTATGGTATC.................................................................................................... 24 3 2 31.00 62 0 0 0 0 35 27 0
............................................................TGAGGTAGTAGGTTCTATGGTTTATC.................................................................................................. 26 3 1 31.00 31 0 0 0 0 14 17 0
..........................................................GTTGAGGTAGTAGGTTGTATGGTT...................................................................................................... 24 0 1 31.00 31 15 2 11 3 0 0 0
............................................................AGAGGTAGTAGGTTGTATGGTTT..................................................................................................... 23 1 1 31.00 31 12 8 3 8 0 0 0
............................................................TGAGGTAGTAGGTTGTATGTTTG..................................................................................................... 23 2 1 31.00 31 21 7 3 0 0 0 0
............................................................AGAGGTAGTAGGTTGTATGGT....................................................................................................... 21 1 1 31.00 31 17 4 7 2 0 0 1
............................................................TGAGGTAGTAGGTTGTGTTGTTAA.................................................................................................... 24 3 6 30.67 184 84 46 43 4 0 0 7
...........................................................TTGAGGTAGTAGGTTGTATGGTTA..................................................................................................... 24 1 1 30.00 30 14 2 3 11 0 0 0
...........................................................TTGAGGTAGTAGGTTGTATGTT....................................................................................................... 22 1 1 30.00 30 15 4 11 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATGGTGTATC.................................................................................................. 26 3 1 30.00 30 0 0 0 0 21 9 0
............................................................TGAGGTAGTAGGTTGTATGGTCA..................................................................................................... 23 2 1 30.00 30 13 7 3 5 0 0 2
............................................................TGAGGTAGTAGGTTGTATGGTTACC................................................................................................... 25 3 2 30.00 60 0 0 0 0 32 28 0
............................................................TGAGGTAGTAGGTTCTATGGT....................................................................................................... 21 1 1 30.00 30 10 6 5 9 0 0 0
............................................................TGAGGTGGTAGGTTGTATGGTA...................................................................................................... 22 2 1 29.00 29 8 9 4 8 0 0 0
............................................................TGAGGTAGTAGGTCGTATGGT....................................................................................................... 21 1 1 29.00 29 14 4 6 5 0 0 0

Anti-sense strand reads

TCGACTGACTTCTATACTATTCCTCAAACTTCGTTGAAACCTTCGACACACGTAGGCCCAACTCCATCATCCAACATACCAAATCTCAATGTGGGACCCTCAATTGACATGTTGGAAGATCGAAAGGAACCTCGTGTGAACTCGGTAGCTCCTTAAGAAGTAGTGAAATTGGACTAGCTCGGTG

***********************************...(((.....((((((.((((((..(((.(((.(((((((((((((..((.((.((...)).)).))))))))))))))).))).)))..)))))))))))).....)))...***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
................CTATTGCTGTAACTTCGTTGAAAC................................................................................................................................................ 24 3 1 2.00 2 2

Generated: 09/01/2015 at 12:21 PM