ID:

mml-let-7a-2

 Coordinate:

chr14:123110827-123110898 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.3
mature

  1. mml-let-7a-3  chr10:90936989-90937010 +
  2. mml-let-7a-2  chr14:123110873-123110894 -
  3. mml-let-7a-1  chr15:107888301-107888322 +
star

Sense Strand Reads

TCCTTGCTTAAGAAATGGTAGTTTTCCAGCCATTGTGACTGCATGCTCCCAGGCTGAGGTAGTAGGTTGTATAGTTTAGAATTACATCAAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGTCTTGCACTAAACAACATGGTGAGAACGATCATGATCCCTCCAGGC

***********************************....((((....((((((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).)))..))))))...))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116840

epididymis		 SRR116845

epididymis		 SRR116844

epididymis		 SRR116839

testes
......................................................TGAGGTAGTAGGTTGTATAGTT................................................................................................ 22 0 3 327200.67 981602 394286 284666 136417 156505 12 1 9715
......................................................TGAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 0 3 50016.67 150050 38702 33335 57615 19042 10 1 1345
......................................................TGAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 1 3 46643.67 139931 41974 50147 23584 22582 159 31 1454
......................................................TGAGGTAGTAGGTTGTATAGT................................................................................................. 21 0 3 44062.33 132187 47086 42031 16226 25723 6 4 1111
......................................................TGAGGTAGTAGGTTGTATAGTTAATC............................................................................................ 26 3 1 31939.00 31939 0 0 0 0 28429 3510 0
......................................................TGAGGTAGTAGGTTGTATAGTTTATC............................................................................................ 26 2 1 22249.00 22249 0 0 0 0 19674 2575 0
......................................................TGAGGTAGTAGTTTGTATAGTT................................................................................................ 22 1 6 18370.83 110225 74786 7077 12009 16238 0 0 115
......................................................TGAGGTAGTAGGTTGTATAGTATC.............................................................................................. 24 2 3 15279.00 45837 0 1 0 0 38117 7719 0
......................................................TGAGGTAGTAGGTTGTATATTT................................................................................................ 22 1 3 11396.00 34188 15401 255 9694 8460 0 0 378
......................................................TGAGGTAGTAGGTTGTATAGTTAA.............................................................................................. 24 1 1 9507.00 9507 2647 3424 1613 1561 44 6 212
......................................................TGAGGTAGTAGGTTGTATTGTT................................................................................................ 22 1 5 8166.60 40833 20271 186 11397 8499 0 0 480
......................................................TGAGGTAGTAGGTTGTATAG.................................................................................................. 20 0 3 7929.00 23787 6234 7872 2705 6772 3 2 199
......................................................TGAGGTAGTAGATTGTATAGTTAA.............................................................................................. 24 2 3 7318.67 21956 6315 7009 3652 4609 37 6 328
......................................................TGAGGTAGTAGGTTGTATAGATC............................................................................................... 23 2 3 5453.33 16360 0 0 0 0 12869 3491 0
......................................................TGAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 3 5158.67 15476 3421 6363 2186 3326 51 12 117
......................................................TGAGGTAGGAGGTTGTATAGTTT............................................................................................... 23 1 4 5116.00 20464 11573 2601 3062 2980 0 0 248
......................................................TGAGGTAGTAGGTTGTATAGTAA............................................................................................... 23 2 3 2969.67 8909 2160 3561 1404 1677 9 2 96
......................................................TGAGGTAGTAGATTGTATAGTTTATC............................................................................................ 26 3 2 2649.00 5298 0 0 0 0 4728 570 0
......................................................TGAGGTAGTAGCTTGTATAGTT................................................................................................ 22 1 5 2438.80 12194 10861 715 215 385 0 0 18
......................................................TGAGGTAGTAGGTTGTATATT................................................................................................. 21 1 3 2101.33 6304 2769 44 1479 1935 0 4 73
......................................................TGAGGTAGTAGGTTGTATATTTT............................................................................................... 23 1 3 1796.33 5389 1184 18 3325 819 0 0 43
......................................................TGAGGTAGTAGGTTGTATATTTA............................................................................................... 23 2 3 1760.33 5281 2133 46 1652 1395 1 0 54
......................................................TGAGGTAGTAGGTTGTATAGTTTA.............................................................................................. 24 0 1 1611.00 1611 292 455 646 191 4 1 22
......................................................TGAGGTAGTAGGTTTTATAGTT................................................................................................ 22 1 4 1534.75 6139 2651 175 1167 2019 0 0 127
......................................................TGAGGTAGTAGGTTGTATAGAATC.............................................................................................. 24 3 3 1316.00 3948 0 0 0 0 3352 596 0
......................................................TGAGGTAGTAGGTTGTATA................................................................................................... 19 0 3 1294.33 3883 1178 1106 582 993 0 0 24
......................................................TGAGGTAGTAGGTTGTATAGTTG............................................................................................... 23 1 5 1195.00 5975 1764 2662 790 701 0 0 58
......................................................TGAGGTAGTAGGTTGTATAGTATATC............................................................................................ 26 3 1 1028.00 1028 0 0 0 0 923 105 0
......................................................TGAGGTAGTAGGTTGTATAGTTGATC............................................................................................ 26 3 2 967.00 1934 0 1 0 0 1733 200 0
......................................................TGAGGTAGTAGGTTGTATTGTTT............................................................................................... 23 1 4 952.25 3809 1610 15 1258 888 0 1 37
......................................................TGAGGTAGTAGGTTGTAT.................................................................................................... 18 0 4 951.00 3804 1203 950 730 869 1 1 50
......................................................TGAGGTAGTAGGTTGTACAGTT................................................................................................ 22 1 4 943.75 3775 1613 1682 227 243 0 0 10
......................................................TGAGGTAGTAGGTTGTATAGTAT............................................................................................... 23 1 3 914.33 2743 625 887 616 558 35 4 18
......................................................TGAGGTAGTAGGTTGTATAGA................................................................................................. 21 1 3 851.33 2554 573 890 311 752 6 2 20
......................................................TGAGGTAGTAGGTTGTATTGT................................................................................................. 21 1 5 762.80 3814 1545 20 1061 1140 0 0 48
......................................................TGAGGTAGTAGGTTGTATTGTATC.............................................................................................. 24 3 6 633.50 3801 0 0 0 0 161 3640 0
.....................................................CTGAGGTAGTAGATTGTATAGTT................................................................................................ 23 1 3 596.67 1790 455 810 213 304 0 0 8
......................................................TGAGGTAGTAGGTTGTATTGTTA............................................................................................... 23 2 5 559.20 2796 1128 15 971 631 0 1 50
......................................................TGAGGTAGTAGGTTGTATAT.................................................................................................. 20 1 3 551.67 1655 496 115 354 675 0 0 15
......................................................TGAGGTAGTAGGTTGTATAA.................................................................................................. 20 1 4 534.75 2139 483 690 360 585 0 1 20
......................................................AGAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 4 523.00 2092 1398 169 232 287 0 0 6
......................................................TGAGGTAGTAGATTGTATAGTTTA.............................................................................................. 24 1 2 479.00 958 231 261 287 161 8 0 10
......................................................TGAGGTAGTAGTTTGTATAGTTT............................................................................................... 23 1 5 463.20 2316 1266 115 617 312 0 0 6
......................................................TGAGGTAGTAGTTTGTATAGT................................................................................................. 21 1 6 427.17 2563 1648 233 207 474 1 0 0
......................................................TGAGGTAGTAGGTTGTATATC................................................................................................. 21 2 3 384.67 1154 0 0 0 0 423 731 0
......................................................TGAGGTAGTAGGTTGTATTTTT................................................................................................ 22 2 7 376.29 2634 840 8 1255 501 0 0 30
.....................................................CTGAGGTAGTAGGTTGTATAGTT................................................................................................ 23 0 1 362.00 362 76 184 61 37 0 0 4
......................................................TGAGGTGGTAGGTTGTATAGTT................................................................................................ 22 1 3 354.67 1064 442 340 139 134 0 0 9
......................................................CGAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 325.00 975 398 243 168 161 0 0 5
......................................................TGAGGTAGTAGGTTGTATATTTAA.............................................................................................. 24 2 1 306.00 306 128 1 83 84 0 0 10
......................................................TGAGGTAGTAGGTTGTGTAGTT................................................................................................ 22 1 4 299.00 1196 532 368 148 137 0 0 11
......................................................TGAGGTAGTAGGTTGTATAGTTTC.............................................................................................. 24 1 3 287.00 861 8 9 29 4 680 131 0
......................................................TGAGGTAGTAGGTTTTATAGT................................................................................................. 21 1 4 282.75 1131 439 43 189 450 0 0 10
......................................................TGAGGTAGTAGGTTTTATAGTTT............................................................................................... 23 1 4 269.50 1078 252 26 528 261 0 0 11
......................................................TGAGGTAGGAGGTTGTATAGTTTA.............................................................................................. 24 1 2 264.00 528 279 90 89 63 0 0 7
......................................................TGAGGTAGTAGGTTGTATAGTTC............................................................................................... 23 1 3 250.00 750 169 141 185 61 150 37 7
......................................................TGAGGTAGTAGGTTGTATAGTTCATC............................................................................................ 26 3 1 250.00 250 0 0 0 0 222 28 0
......................................................TGAGGTAGTAGCTTGTATAGT................................................................................................. 21 1 5 246.60 1233 1095 73 18 44 0 0 3
......................................................TGAGGTAGTAGGTTGTATTGTA................................................................................................ 22 2 5 246.40 1232 334 6 433 437 0 6 16
......................................................TGAGGTAGTAGGTTTTATATTT................................................................................................ 22 2 6 244.67 1468 789 2 231 426 0 0 20
......................................................TGAGGTAGTAGTTTGTATATTT................................................................................................ 22 2 9 242.44 2182 1113 5 617 445 0 0 2
......................................................TGAGGTAGTAGGTTGTA..................................................................................................... 17 0 4 240.00 960 137 249 133 213 73 149 6
......................................................TGCGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 229.67 689 211 359 27 82 0 0 10
......................................................TGAGGTAGGAGGTTGTATAGTAT............................................................................................... 23 2 4 222.25 889 418 192 120 150 1 0 8
......................................................TGGGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 222.00 666 274 225 94 64 0 0 9
......................................................TGAGGTAGTAGTTTGTATAGTTA............................................................................................... 23 2 7 220.57 1544 951 138 224 220 0 0 11
......................................................TGAGGTAGTAGGTTGTATCGTT................................................................................................ 22 1 4 217.75 871 419 246 74 119 1 0 12
......................................................TGAGGTAGTAGCTTGTATAGTTA............................................................................................... 23 2 5 214.80 1074 935 86 20 30 0 0 3
......................................................TGAGGCAGTAGGTTGTATAGTT................................................................................................ 22 1 3 210.00 630 200 185 57 66 0 0 122
......................................................TGAGGTAGTAGGTTGTATATTA................................................................................................ 22 2 3 203.67 611 185 11 195 216 1 0 3
......................................................TAAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 187.33 562 226 142 112 80 0 0 2
......................................................TGAGGTAGTAGGTTGTATATTTTATC............................................................................................ 26 3 1 186.00 186 0 0 0 0 154 32 0
......................................................TGAGGTAGTAGGTTGTATAGAA................................................................................................ 22 2 4 184.00 736 157 305 86 175 7 2 4
......................................................TGAGGTAGTAGGTTGTATAGTTAAC............................................................................................. 25 2 1 180.00 180 1 1 0 1 155 22 0
......................................................TGAGGTAGTAGGTTGTTTAGTT................................................................................................ 22 1 3 169.00 507 181 117 95 105 0 0 9
......................................................TGAGGTAGTAGGTTGTCTAGTT................................................................................................ 22 1 3 168.67 506 188 130 87 94 0 0 7
......................................................TGAGGTAGTAGGTTTTATAGTTA............................................................................................... 23 2 5 165.40 827 301 30 216 263 0 0 17
......................................................TGAGGTAGTGGGTTGTATAGTT................................................................................................ 22 1 3 160.00 480 236 157 40 44 0 0 3
......................................................TGAGGTAGTAGGTTGTATAATC................................................................................................ 22 2 4 157.00 628 0 0 0 0 448 180 0
......................................................TGAGGTAGTAGGTTGTATAGTTGA.............................................................................................. 24 1 2 156.00 312 70 146 51 38 2 0 5
......................................................TGAGGTAGTAGGTTGTATAGTTAC.............................................................................................. 24 2 3 152.00 456 8 9 5 1 349 84 0
......................................................TGAGGTAGTAGGTTGCATAGTT................................................................................................ 22 1 4 145.00 580 241 219 51 66 0 0 3
......................................................TGAGGTAGTAGCTTGTATAGTTT............................................................................................... 23 1 4 144.50 578 515 24 21 17 0 0 1
......................................................TGAGGTAGTAGGTTGTATAGTAAA.............................................................................................. 24 2 1 144.00 144 37 59 19 19 7 2 1
......................................................TGAGGTAGTCGGTTGTATAGTT................................................................................................ 22 1 3 143.67 431 168 148 59 51 0 0 5
......................................................TGAGGTAGTAGGTTGTATTGTTTATC............................................................................................ 26 3 2 141.50 283 0 0 0 0 41 242 0
......................................................TGAGGTAGTAGGTTGTATAGTTTAT............................................................................................. 25 1 1 141.00 141 3 13 107 9 9 0 0
......................................................TGAGGTAGTAGGTTGTATAGTTAAA............................................................................................. 25 2 2 137.50 275 68 105 39 41 5 4 13
......................................................TGAGGTAGGAGGTTGTATAGTTTATC............................................................................................ 26 3 2 136.50 273 0 0 0 0 212 61 0
......................................................TGAGGTAGGAGGTTGTATAGTATC.............................................................................................. 24 3 5 135.20 676 0 0 0 0 457 219 0
......................................................TTAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 134.00 402 169 75 106 49 0 0 3
......................................................TGAGTTAGTAGGTTGTATAGTATC.............................................................................................. 24 3 3 125.00 375 0 0 0 0 290 85 0
......................................................TGAGGTATTAGGTTGTATAGTATC.............................................................................................. 24 3 4 123.50 494 0 0 0 0 393 101 0
......................................................TGAGGTAGTAGGTTTTATTGTT................................................................................................ 22 2 10 121.60 1216 480 0 366 341 0 0 29
......................................................TGAGGTAGTAGTTTGTATTGTT................................................................................................ 22 2 11 120.64 1327 926 1 243 156 0 0 1
......................................................TGAGGGAGTAGGTTGTATAGTT................................................................................................ 22 1 3 115.67 347 50 161 62 45 0 0 29
......................................................TGAGGTAGTAGGCTGTATAGTT................................................................................................ 22 1 3 113.67 341 138 117 29 55 0 0 2
......................................................TGAGGTAGTAGTTTTTATAGTT................................................................................................ 22 2 10 113.50 1135 655 7 151 317 0 0 5
......................................................TGAGGTAGCAGGTTGTATAGTT................................................................................................ 22 1 4 111.00 444 170 167 42 61 0 0 4
......................................................TGAGGTAGTAGGTTGTATTGTTAA.............................................................................................. 24 2 2 110.50 221 67 0 89 60 1 0 4
......................................................TGAGGTAGTATGTTGTATAGTT................................................................................................ 22 1 4 108.25 433 177 102 51 57 0 0 46
......................................................TGAGGTAGTAGGTTGTATAGTC................................................................................................ 22 1 3 105.33 316 111 106 32 49 12 5 1
......................................................TGAGGTAGTAGGTTGTATAGTTTAA............................................................................................. 25 1 2 104.50 209 42 63 73 28 0 0 3
......................................................TGAGGTAGTAGGTCGTATAGTT................................................................................................ 22 1 3 103.33 310 121 117 25 45 0 0 2
......................................................TGAGGTAGTAGCTTGTATATTT................................................................................................ 22 2 5 101.80 509 488 1 9 11 0 0 0
......................................................TGAGGTAGGAGGTTGTATATTTT............................................................................................... 23 2 4 101.75 407 189 0 133 84 0 0 1
......................................................TGAGGTAGTAGGTTGTATTG.................................................................................................. 20 1 5 99.40 497 198 2 116 177 0 0 4
......................................................TGAGGTAGTAGATTGTATAGTAAA.............................................................................................. 24 3 3 98.33 295 89 87 45 74 0 0 0
......................................................TGCGGTAGTAGGTTGTATAGTTTATC............................................................................................ 26 3 1 98.00 98 0 0 0 0 89 9 0
......................................................TGAGGTAGTAGGTTGTATAGCT................................................................................................ 22 1 3 96.00 288 119 114 24 30 0 0 1
......................................................TGAGGTAGTAGGTTGGATAGTTTATC............................................................................................ 26 3 1 92.00 92 0 0 0 0 77 15 0
......................................................TCAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 89.33 268 110 57 82 17 0 0 2
......................................................TGAGGTACTAGGTTGTATAGTT................................................................................................ 22 1 3 88.67 266 123 68 30 42 1 0 2
......................................................TGAGGTCGTAGGTTGTATAGTT................................................................................................ 22 1 3 87.00 261 112 99 10 32 0 0 8
......................................................TGAGGTAGTACGTTGTATAGTT................................................................................................ 22 1 3 84.00 252 97 54 25 17 0 0 59
......................................................TGAGGTAGTAGGGTGTATAGTT................................................................................................ 22 1 3 84.00 252 79 123 22 26 0 0 2
......................................................TGAGGTAGTAGGTTGTATAGTG................................................................................................ 22 1 3 83.33 250 54 122 35 36 0 0 3
......................................................TGAGGAAGTAGGTTGTATAGTT................................................................................................ 22 1 3 83.33 250 48 89 26 25 0 0 62
......................................................TGAGGTAGTAGATTGTATATTTAA.............................................................................................. 24 3 11 82.27 905 308 8 291 285 1 0 12
.......................................................GAGGTAGTAGGTTGTATAGTT................................................................................................ 21 0 3 80.33 241 99 61 35 46 0 0 0
......................................................TGAGGTATTAGGTTGTATAGTTTATC............................................................................................ 26 3 1 78.00 78 0 0 0 0 67 11 0
......................................................TGATGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 76.67 230 88 62 24 35 0 0 21
......................................................TGAGGTAGTAGGTTGTATACTT................................................................................................ 22 1 3 75.67 227 119 46 36 26 0 0 0
.....................................................CTGAGGTAGTAGGTTGTATGGTT................................................................................................ 23 1 2 75.00 150 41 50 30 27 0 0 2
......................................................TGAGGTAGTAGGTTGTATAGTTTAATC........................................................................................... 27 3 2 74.00 148 0 0 0 0 130 18 0
......................................................TTAGGTAGTAGGTTGTATAGTATC.............................................................................................. 24 3 4 72.00 288 0 0 0 0 245 43 0
......................................................TGAGGTAGTAGGTTGTATATTAA............................................................................................... 23 3 5 71.80 359 135 2 111 100 3 0 8
......................................................TGAGGTAGTAGGTTCTATAGTT................................................................................................ 22 1 3 71.33 214 106 60 25 21 0 0 2
......................................................TGAGGTAGTAGGTTGTTTTGTT................................................................................................ 22 2 8 71.25 570 395 1 85 76 0 0 13
......................................................TGAGGTAGTAGGTTGTATT................................................................................................... 19 1 5 68.20 341 94 73 86 86 0 0 2
......................................................TGAGGTATTAGGTTGTATAGTT................................................................................................ 22 1 3 66.67 200 84 48 37 30 0 0 1
.....................................................CTGAGGTAGTAGGTTGTATAGTTT............................................................................................... 24 0 1 66.00 66 6 37 20 3 0 0 0
......................................................TGAGGTAGTAGGTTGTATATTATC.............................................................................................. 24 3 5 65.20 326 0 0 0 0 279 47 0
......................................................TGAGGTAGTAGGTTGTATTGTAA............................................................................................... 23 3 8 64.00 512 163 0 172 170 0 0 7
.....................................................CTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 0 1 63.00 63 12 37 6 7 0 0 1
......................................................CGAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 63.00 189 55 30 90 14 0 0 0
......................................................TGAGGTAGTAGGTTGTATAGTTTATT............................................................................................ 26 2 1 61.00 61 1 2 3 1 42 12 0
......................................................TGAGGTAGTAGGTTGGATAGTT................................................................................................ 22 1 3 60.67 182 30 125 12 14 0 0 1
......................................................TGAGGTAGTAGGTTGTATTGTAT............................................................................................... 23 2 4 59.75 239 50 0 80 106 0 1 2
......................................................TGAGGTAGTAGGTTGTATTTTTT............................................................................................... 23 2 4 59.75 239 61 0 133 44 0 0 1
......................................................TGAGGTAGTAGGTTGTATAGTTACC............................................................................................. 25 3 3 59.67 179 1 0 1 0 141 36 0
.....................................................CTGAGGTAGTAGATTGTATAGTTA............................................................................................... 24 2 3 58.67 176 29 102 22 23 0 0 0
......................................................TGAGGTAGTAGGTTGTACAGT................................................................................................. 21 1 4 57.50 230 107 91 6 24 0 0 2
......................................................TGAGGTAGTAGGTTGTGTAGTTTATC............................................................................................ 26 3 1 57.00 57 0 0 0 0 54 3 0
......................................................AGAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 4 56.75 227 124 19 47 35 0 0 2
......................................................TGAGGTAGAAGGTTGTATAGTT................................................................................................ 22 1 4 55.25 221 61 100 28 29 0 0 3
.....................................................CTGAGGTAGTAGATTGTATAGT................................................................................................. 22 1 3 54.67 164 34 78 19 33 0 0 0
......................................................TGAGGTAGTAGGTTGTATAGGATC.............................................................................................. 24 3 3 53.67 161 0 0 0 1 105 55 0
......................................................TGCGGTAGTAGGTTGTATAGTATC.............................................................................................. 24 3 3 53.33 160 0 0 0 0 139 21 0
......................................................TGAGTTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 53.33 160 68 47 16 28 0 0 1
......................................................TGAGGTAGTAGGTTGTATAAA................................................................................................. 21 2 7 53.14 372 95 134 66 76 0 0 1
......................................................TGAGGTAGTTGGTTGTATAGTT................................................................................................ 22 1 3 53.00 159 55 70 18 15 0 0 1
......................................................TGAGGTAGTAGGTTATATAGTT................................................................................................ 22 1 3 53.00 159 47 70 19 22 0 0 1
......................................................CGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 3 52.33 157 48 55 26 27 0 0 1
......................................................TGATGTAGTAGGTTGTATAGTATC.............................................................................................. 24 3 4 52.25 209 0 0 0 0 172 37 0
......................................................TGAGGTGGTAGGTTGTATAGT................................................................................................. 21 1 3 51.00 153 54 57 19 23 0 0 0
......................................................TGAGGTAGTAGCTTGTATAGTTAA.............................................................................................. 24 2 1 51.00 51 45 3 1 2 0 0 0
......................................................CGAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 3 50.00 150 53 44 30 23 0 0 0
......................................................TGAGGTGGTAGGTTGTATAGTTT............................................................................................... 23 1 3 49.67 149 51 50 41 7 0 0 0
....................................................TCTGAGGTAGTAGATTGTATAGTT................................................................................................ 24 2 3 49.33 148 62 36 19 31 0 0 0
......................................................TGTGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 48.67 146 38 71 16 19 0 0 2
......................................................TGAGGTAGTAGGTTGT...................................................................................................... 16 0 5 48.60 243 11 107 57 67 0 1 0
......................................................TGAGGTAGTAGGTTGTATAGTAC............................................................................................... 23 2 3 47.67 143 3 3 2 1 105 28 1
......................................................TGAGGTAGTAGTTTGTATAGTTTATC............................................................................................ 26 3 1 47.00 47 0 0 0 0 36 11 0
......................................................TGAGGTAGTAGGTTGTATAGGT................................................................................................ 22 1 3 46.33 139 32 75 11 19 0 0 2
......................................................TGAGGTGGTAGGTTGTATAGTTA............................................................................................... 23 2 3 45.33 136 41 65 16 11 0 0 3
......................................................TGAGGTAGTAGGTTGTATAAATC............................................................................................... 23 3 8 45.13 361 0 0 0 0 273 88 0
......................................................TGAGGTAGTAGGTTTTATAGTTTATC............................................................................................ 26 3 1 45.00 45 0 0 0 0 41 4 0
......................................................TGAGGTAGTAGGTTGTGTAGTTT............................................................................................... 23 1 4 45.00 180 56 49 55 18 0 0 2
......................................................TGAGGTAGTAGGTTGTATAGAT................................................................................................ 22 1 3 44.67 134 29 57 14 19 12 2 1
.....................................................CTGAGGTAGTAGGTTGTATAGTTATC............................................................................................. 26 3 2 44.50 89 0 0 0 0 78 11 0
......................................................TGAGGTAGTAGGTTGTATAGTAG............................................................................................... 23 2 5 44.40 222 44 118 29 28 0 0 3
......................................................TGAGGTAGTAGGTTGTATATTAT............................................................................................... 23 2 3 44.00 132 35 1 62 33 0 0 1
......................................................TGAGGTAGTAGGTTGTGTAGT................................................................................................. 21 1 4 44.00 176 64 63 17 32 0 0 0
......................................................TGAGGTACTAGGTTGTATAGTATC.............................................................................................. 24 3 5 43.40 217 0 0 0 0 176 41 0
......................................................TGAGGTAGTAGGTTGTATATTTTA.............................................................................................. 24 1 1 43.00 43 11 0 26 6 0 0 0
......................................................AGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 4 42.50 170 90 20 28 32 0 0 0
.....................................................CTGAGGTAGTAGATTGTATAGTTT............................................................................................... 24 1 2 41.50 83 5 39 24 15 0 0 0
......................................................TGAGGTAGTAGCTTGTATAG.................................................................................................. 20 1 5 41.40 207 175 14 3 14 0 0 1
......................................................TGAGGTAGTAGGTTGTAAAGTT................................................................................................ 22 1 3 41.33 124 33 72 9 9 0 0 1
......................................................TGAGGTAGTAGGTTTTATATTTT............................................................................................... 23 2 5 41.20 206 75 0 79 48 0 0 4
......................................................TGAGGTAGTAGGTTGTATATATC............................................................................................... 23 3 5 41.00 205 0 0 0 0 164 41 0
......................................................TGAGGTAGTAGGTTTTATAG.................................................................................................. 20 1 6 40.83 245 54 9 29 149 0 0 4
........................................................AGGTAGTAGGTTGTATAGTT................................................................................................ 20 0 3 40.33 121 51 34 16 20 0 0 0
......................................................TGAGGTAGTAGATTGTATAGTTAAAA............................................................................................ 26 3 2 40.00 80 23 33 8 15 0 0 1
......................................................TGAGGTAGTAGGTTGTATAGTGTATC............................................................................................ 26 3 1 40.00 40 0 0 0 0 37 3 0
......................................................TGAGGTAGTAGGTTGTGTAA.................................................................................................. 20 2 15 39.73 596 215 200 96 81 0 0 4
......................................................TGAGGTAGTAGGTTGGATAGTATC.............................................................................................. 24 3 4 39.25 157 0 0 0 0 104 53 0
......................................................TGAGGTAGTAGGTTGTGTAGTTA............................................................................................... 23 2 4 39.25 157 44 77 19 15 0 0 2
.....................................................CTGAGGTAGTAGGTTGTATAGTTA............................................................................................... 24 1 1 39.00 39 1 31 4 3 0 0 0
......................................................TGAGGTAGTAGGTTGTTTTGTTT............................................................................................... 23 2 5 39.00 195 122 1 35 31 0 0 6
......................................................TGAGGTAGTAGGTTGTATTTT................................................................................................. 21 2 10 38.60 386 110 9 156 107 0 1 3
......................................................TGAGGTAGTAGTTTGTATAGTA................................................................................................ 22 2 6 38.33 230 103 31 32 64 0 0 0
......................................................TGAAGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 37.67 113 31 45 10 17 0 0 10
......................................................TGGGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 37.00 111 29 29 39 14 0 0 0
........................................................AGGTAGTAGGTTGTATAGTATC.............................................................................................. 22 2 4 37.00 148 0 0 0 0 110 38 0
......................................................TGAGCTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 37.00 111 48 40 5 17 0 0 1
......................................................TGGGGTAGTAGGTTGTATAGT................................................................................................. 21 1 3 37.00 111 43 36 18 14 0 0 0
......................................................TGAGGTAGTAGGTTGTATAGTTAAT............................................................................................. 25 2 1 36.00 36 8 9 8 2 9 0 0
......................................................TGAGGTAGTAGGTTGTATCGTTT............................................................................................... 23 1 4 35.75 143 52 34 41 13 0 0 3
......................................................TGAGGTAGTAGGTTGTATAGTGA............................................................................................... 23 2 4 35.75 143 45 59 19 19 0 0 1
......................................................TGAGGTAGTAGGTTGTATAGTGT............................................................................................... 23 1 3 35.67 107 27 44 14 21 0 0 1
......................................................TGCGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 3 35.67 107 27 67 5 7 0 0 1
......................................................TGAGGTAGTAGGTTGTAA.................................................................................................... 18 1 8 35.63 285 40 88 69 86 0 0 2
......................................................TAAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 35.33 106 28 20 46 10 0 0 2
......................................................TGACGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 35.00 105 30 22 8 12 0 0 33
......................................................TGAGGTAGTAGGTTGTATTGATC............................................................................................... 23 3 8 34.88 279 0 0 0 0 8 271 0
......................................................TGCGGTAGTAGGTTGTATAGT................................................................................................. 21 1 3 34.67 104 19 69 4 11 0 0 1
......................................................TGAGGTAGTAGGTTGTATAGTTAATT............................................................................................ 26 3 2 34.50 69 0 0 1 1 40 27 0
.......................................................TAGGTAGTAGGTTGTATAGTT................................................................................................ 21 1 3 34.33 103 59 23 12 9 0 0 0
......................................................TGAGGTAGTAGGTTGTATAGTTCA.............................................................................................. 24 1 1 34.00 34 9 7 13 3 0 1 1
......................................................TGAGGTAGTAGGTTGTATACTTTATC............................................................................................ 26 3 1 34.00 34 0 0 0 0 33 1 0
......................................................TGAGGCAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 33.67 101 20 19 35 8 0 0 19
......................................................TGCGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 33.33 100 15 57 14 10 0 0 4
......................................................GGAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 3 33.33 100 38 30 9 23 0 0 0
......................................................TGAGGTTGTAGGTTGTATAGTT................................................................................................ 22 1 3 33.00 99 33 40 13 12 0 0 1
......................................................TGAGGTAGTAGGTTGTATAGGTTATC............................................................................................ 26 3 1 33.00 33 0 0 0 0 24 9 0
......................................................TGAGGTAGTAGTTTGTATAG.................................................................................................. 20 1 6 32.50 195 93 19 24 56 0 0 3
......................................................TGAGGTAGTAGGTTGTACAGTTTATC............................................................................................ 26 3 1 32.00 32 0 0 0 0 27 5 0
......................................................TGAGGTAGTAGGTTGTATCGTTTATC............................................................................................ 26 3 2 32.00 64 0 0 0 0 55 9 0
......................................................TGAGGTACTAGGTTGTATAGTTTATC............................................................................................ 26 3 1 32.00 32 0 0 0 0 28 4 0
......................................................TGAGGTAATAGGTTGTATAGTT................................................................................................ 22 1 4 31.75 127 35 48 21 21 0 0 2
......................................................TGAGGTATTAGGTTGTATAGATC............................................................................................... 23 3 3 31.67 95 0 0 0 0 62 33 0
......................................................TGAGGTAGTAGGTTGTCTAGTTT............................................................................................... 23 1 3 31.67 95 18 14 51 12 0 0 0
......................................................TGAGGTAGTAGGTTGTTTAGTTA............................................................................................... 23 2 3 31.33 94 26 25 22 19 0 0 2
......................................................TGAGGTAGTAGGTTGTACAGTTA............................................................................................... 23 2 5 31.00 155 65 64 12 12 0 0 2
......................................................TGAGGTAGTAGGTTGTTTAGTTT............................................................................................... 23 1 3 31.00 93 24 12 40 15 0 0 2
......................................................TGAGGTAGTAGGTTGTGTTGTTAA.............................................................................................. 24 3 6 30.67 184 84 4 46 43 0 0 7
......................................................TGAGGTAGTCGGTTGTATAGTTT............................................................................................... 23 1 3 30.33 91 26 22 36 7 0 0 0
......................................................TGAGGTAGTAGGTTGTGTA................................................................................................... 19 1 4 30.25 121 47 40 13 21 0 0 0
......................................................TGAGGTAGTAAGTTGTATAGTT................................................................................................ 22 1 5 29.80 149 50 50 18 26 0 0 5
......................................................AGAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 4 29.50 118 56 29 20 12 0 0 1
......................................................TGAGATAGTAGGTTGTATAGTT................................................................................................ 22 1 3 29.33 88 26 40 10 10 0 0 2
......................................................TGAGGTAGTAGTTTGTATAGTTAA.............................................................................................. 24 2 1 29.00 29 17 4 4 4 0 0 0
......................................................TGAGGTAGTAGGTTGAATAGTT................................................................................................ 22 1 3 29.00 87 15 54 7 11 0 0 0
......................................................TGAGGTAGTAGGTTTTATATT................................................................................................. 21 2 12 28.67 344 158 0 44 135 0 0 7
......................................................TTAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 28.67 86 15 7 52 11 0 0 1
.......................................................GAGGTAGTAGGTTGTATAGTTAATC............................................................................................ 25 3 1 28.00 28 0 0 0 0 26 2 0
......................................................TGAGGTAGTAGGTTGTCTAGTTA............................................................................................... 23 2 3 28.00 84 26 23 21 14 0 0 0
......................................................TGAGGTAGTAGGTTGTACAGTTT............................................................................................... 23 1 4 28.00 112 39 46 21 5 0 0 1
......................................................TGAGGTAGTAGGATGTATAGTT................................................................................................ 22 1 4 27.25 109 28 61 7 12 0 0 1
......................................................TGAGGTAGTATGTTGTATAGTTTATC............................................................................................ 26 3 1 27.00 27 0 0 0 0 19 8 0
......................................................TGAGGTAGTAGGTTGTCTAGTTTATC............................................................................................ 26 3 1 27.00 27 0 0 0 0 26 1 0
......................................................TGAGGTAGTAGGTAGTATAGTT................................................................................................ 22 1 3 26.67 80 23 45 3 7 0 0 2
......................................................TGAGGTAGTAGATTGTATAGTTCA.............................................................................................. 24 2 3 26.33 79 24 24 12 18 0 0 1
......................................................TGAGGTAGTGGGTTGTATAGTTA............................................................................................... 23 2 3 26.00 78 24 30 9 15 0 0 0
......................................................TGAGGTAGTAGGTTGTCTAGT................................................................................................. 21 1 3 26.00 78 30 19 11 17 0 0 1
......................................................TGAGGTAGTGGGTTGTATAGTTT............................................................................................... 23 1 3 26.00 78 25 26 21 6 0 0 0
......................................................TGAGGTAGTCGGTTGTATAGTTTATC............................................................................................ 26 3 1 26.00 26 0 0 0 0 18 8 0
......................................................TAAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 3 26.00 78 37 17 11 13 0 0 0
......................................................TGAGGTAGTAGATTTTATAGTTAA.............................................................................................. 24 3 8 25.00 200 65 6 45 81 0 0 3
......................................................TGAGGTAGTAGGTTGTATAATT................................................................................................ 22 1 3 25.00 75 24 28 8 8 5 1 1
.......................................................TAGGTAGTAGGTTGTATAGTATC.............................................................................................. 23 3 5 24.60 123 0 0 0 0 111 12 0
......................................................TGAGGTAGCAGGTTGTATAGTTT............................................................................................... 23 1 3 24.33 73 17 32 15 9 0 0 0
......................................................TGAGGCAGTAGGTTGTATAGT................................................................................................. 21 1 3 24.33 73 23 26 5 7 0 0 12
......................................................TGAGGTAGTAGGTTGTATATTTG............................................................................................... 23 2 6 23.00 138 75 1 33 28 0 0 1
......................................................TGAGGGAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 23.00 69 4 13 39 9 0 0 4
......................................................TGAGGTAGTAGGTTGTAAA................................................................................................... 19 1 7 23.00 161 19 35 38 69 0 0 0
......................................................TGAGGCAGTAGGTTGTATAGTTA............................................................................................... 23 2 4 23.00 92 22 35 9 9 0 0 17
......................................................TGAGGTAGTAGGTTGTATAGTTAAAA............................................................................................ 26 2 1 23.00 23 7 8 2 3 0 0 3
......................................................TGAGGTAGTAGGTTGTATCGT................................................................................................. 21 1 4 23.00 92 41 26 10 14 0 0 1
......................................................TGCGGTAGTAGGTTGTATAGATC............................................................................................... 23 3 3 22.33 67 0 0 0 0 56 11 0
......................................................TGAGGTAGTCGGTTGTATAGT................................................................................................. 21 1 3 22.33 67 26 23 10 8 0 0 0
......................................................TGAGGTAGTAGGTTTTATAGTTAA.............................................................................................. 24 2 2 22.00 44 14 2 13 13 0 0 2
......................................................TGAGGTAGTAGGGTGTATAGTTTATC............................................................................................ 26 3 1 22.00 22 0 0 0 0 20 2 0
......................................................TGAGGTAGTAGGTTGCATAGTTA............................................................................................... 23 2 4 22.00 88 30 38 11 6 0 0 3
......................................................TGAGGTAGTAGGTTGTATAGATT............................................................................................... 23 1 3 21.67 65 0 6 3 2 38 16 0
......................................................TGGGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 4 21.50 86 30 24 18 14 0 0 0
........................................................AGGTAGTAGGTTGTATAGTTAATC............................................................................................ 24 3 1 21.00 21 0 0 0 0 16 5 0
......................................................TGAGGTAGGAGGTTGTATAGTTTAT............................................................................................. 25 2 2 21.00 42 19 5 16 1 0 1 0
......................................................TGAGGTAGTACGTTGTATAGTTTATC............................................................................................ 26 3 1 21.00 21 0 0 0 0 21 0 0
......................................................TGAGGTAGTGGGTTGTATAGT................................................................................................. 21 1 3 20.67 62 27 16 11 8 0 0 0
......................................................TCAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 1 3 20.33 61 11 9 35 6 0 0 0
......................................................TGAGGTAGTAGGTTGTATAGTTTAC............................................................................................. 25 1 1 20.00 20 1 0 0 0 15 4 0
......................................................TGAGGTAGTAGGCTGTATAGT................................................................................................. 21 1 3 20.00 60 22 24 7 5 0 0 2
......................................................TGAGGTAGCAGGTTGTATAGTTTATC............................................................................................ 26 3 1 20.00 20 0 0 0 0 19 1 0
......................................................TTAGGTAGTAGGTTGTATAGTTTATC............................................................................................ 26 3 1 20.00 20 0 0 0 0 18 2 0
......................................................TGAGGTAGTAGGTTGCATAGT................................................................................................. 21 1 4 19.75 79 27 27 11 14 0 0 0
......................................................TGACGTAGTAGGTTGTATAGTATC.............................................................................................. 24 3 3 19.67 59 0 0 0 0 50 9 0
.......................................................GAGGTAGTAGGTTGTATAGTTT............................................................................................... 22 0 3 19.67 59 12 21 19 7 0 0 0
......................................................AGAGGTAGTAGTTTGTATAGTT................................................................................................ 22 2 8 19.63 157 129 2 12 14 0 0 0
......................................................TGAGGTAGTAGGTTGTGTTGTTTA.............................................................................................. 24 2 3 19.33 58 38 1 11 8 0 0 0
......................................................TGAGGTAGTAGGTTGTATAGTCA............................................................................................... 23 2 3 19.00 57 18 27 5 5 0 0 2
......................................................TGAGGTAGTAGCTTGTATAGTA................................................................................................ 22 2 5 19.00 95 80 7 1 6 0 0 1
......................................................TTAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 3 18.67 56 28 12 11 4 0 0 1
......................................................TGAGGTACTAGGTTGTATAGATC............................................................................................... 23 3 3 18.67 56 0 0 0 0 43 13 0
......................................................TGAGGTAGTAGGTTTTATTGTTT............................................................................................... 23 2 6 18.67 112 33 0 48 27 0 0 4
......................................................TGAGGTACTAGGTTGTATAGTTT............................................................................................... 23 1 3 18.33 55 18 16 12 8 0 0 1
......................................................TGAGGTAGTAGGTTCTATAGT................................................................................................. 21 1 3 18.00 54 21 21 9 3 0 0 0
......................................................TTAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 3 18.00 54 20 10 14 7 2 0 1
......................................................TAAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 5 18.00 90 36 25 17 11 0 0 1
......................................................TGAGGTAGCAGGTTGTATAGTATC.............................................................................................. 24 3 3 18.00 54 0 0 0 0 46 8 0
......................................................TGATGTAGTAGGTTGTATAGTTTATC............................................................................................ 26 3 1 18.00 18 0 0 0 0 18 0 0
......................................................TGAGGTAGTAGATTGTATAGTTAAAAA........................................................................................... 27 3 1 18.00 18 7 7 2 2 0 0 0
......................................................TGAGGTAGTATGTTGTATAGTTT............................................................................................... 23 1 4 17.75 71 19 14 24 10 0 0 4
......................................................TGAGGTAGTATGTTGTATAGT................................................................................................. 21 1 4 17.75 71 31 12 15 11 0 0 2
......................................................TGAGGTAGTAGGTTGTTTAGT................................................................................................. 21 1 3 17.67 53 16 10 12 12 0 0 3
......................................................TGAGGTAGTAGGTTGTATATA................................................................................................. 21 2 4 17.50 70 21 3 20 26 0 0 0
......................................................TGAGGGAGTAGGTTGTATAGT................................................................................................. 21 1 3 17.33 52 3 21 15 10 0 0 3
......................................................TGAGGTAGTATGTTGTATATTT................................................................................................ 22 2 4 17.25 69 30 0 17 20 0 0 2
......................................................TGAGGTAGTAGGTTGCATAGTTT............................................................................................... 23 1 4 17.25 69 27 15 21 6 0 0 0

Anti-sense strand reads

AGGAACGAATTCTTTACCATCAAAAGGTCGGTAACACTGACGTACGAGGGTCCGACTCCATCATCCAACATATCAAATCTTAATGTAGTTCCCTCTATTGACATGTCGGAGGATCGAAAGGAACCCAGAACGTGATTTGTTGTACCACTCTTGCTAGTACTAGGGAGGTCCG

***********************************....((((....((((((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).)))..))))))...))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:10 PM