ID:ocu_4 |
Coordinate:chrUn0002:10705707-10705793 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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TTCTGTGTTGGGTGGAAACTGCACGGGTGCAGATGCGCAGGGTCACCACCTCCACTTGAATGTAGTGCCCTACTCCAGAGGGTGTCACTCACATTGCCTAAAGCATGATTGTCACCTTTTTGAGTAGAGCAATACATAGCATTTACGTTCTGTGTGATGGCCACGAATATAAAGTTGTATAACCTGG
*******************************************************....(((((.(((.((((((.((((((((.((.(((...(((.....)))))).)).)))))))).)))))).))).)))))....********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528820 Adult_testes |
GSM1528821 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|
| ...........................................................................................................ATTGTCACCTTTTTGAGTA............................................................. | 19 | 0 | 1 | 94.00 | 94 | 0 | 94 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGA........................................................... | 21 | 0 | 1 | 85.00 | 85 | 84 | 1 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAG............................................................ | 20 | 0 | 1 | 40.00 | 40 | 36 | 4 |
| ...........................................................................................................ATTGTCACCTTTTTGAGT.............................................................. | 18 | 0 | 1 | 18.00 | 18 | 3 | 15 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGT........................................................... | 21 | 1 | 1 | 16.00 | 16 | 16 | 0 |
| .........................................................................................................AGATTGTCACCTTTTTGAGT.............................................................. | 20 | 1 | 2 | 14.50 | 29 | 29 | 0 |
| ......................................................................TACTCCAGAGGGTGTCACTC................................................................................................. | 20 | 0 | 1 | 10.00 | 10 | 10 | 0 |
| ..............................................................................................................GTCACCTTTTTGAGTAGA........................................................... | 18 | 0 | 1 | 6.00 | 6 | 6 | 0 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGAA.......................................................... | 22 | 1 | 1 | 5.00 | 5 | 5 | 0 |
| ......................................................................TACTCCAGAGGGTGTCACT.................................................................................................. | 19 | 0 | 1 | 3.00 | 3 | 3 | 0 |
| ..........................................................................................................AATTGTCACCTTTTTGAGTA............................................................. | 20 | 1 | 2 | 3.00 | 6 | 0 | 6 |
| ........................................................................................................ATGATTGTCACCTTTTTGAGTA............................................................. | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 |
| .............................................................................................................TGTCACCTTTTTGAGTAG............................................................ | 18 | 0 | 1 | 2.00 | 2 | 2 | 0 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGAT.......................................................... | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 |
| ...........................................................................................................ATTGGCACCTTTTTGAGTAGA........................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 |
| ...........................................................................................................ATTGGCACCTTTTTGAGTAG............................................................ | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...........................................................................................................ATTGCCACCTTTTTGAGTAG............................................................ | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| .............................................................................................................TGTCACCTTTTTGAGTAGA........................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| .............................................................................................................TGTCACCTTTTTGAGTAGAT.......................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGG........................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| .....................................................................................................AGCATGATTGTCACCTTTTTGAGT.............................................................. | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................GCAATCATGATTGTCACCTTTTTGAGTA............................................................. | 28 | 3 | 1 | 1.00 | 1 | 0 | 1 |
| .....................................................................................................AGCATGATTGTCACCTTTTTGAGTAGA........................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ......................................................................TACTCCAGAGGGTGTCACTCAA............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGAC.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...........................................................................................................ATTGTCAACTTTTTGAGTAGA........................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...........................................................................................................ATTGTCACCTTTTTGAGTAGACTC........................................................ | 24 | 3 | 1 | 1.00 | 1 | 0 | 1 |
| ........................................................................................................AGAATTGTCACCTTTTTGAGT.............................................................. | 21 | 2 | 9 | 0.78 | 7 | 7 | 0 |
| .....................................................................................................AAAAAGATTGTCACCTTTTTGAGTA............................................................. | 25 | 3 | 2 | 0.50 | 1 | 0 | 1 |
| .............................................................................................................TGTCACCTTTTTGAGTAGAAT......................................................... | 21 | 2 | 2 | 0.50 | 1 | 1 | 0 |
| ...........................................................................................................ATTGTCACCTTTTTGAG............................................................... | 17 | 0 | 2 | 0.50 | 1 | 0 | 1 |
| .....................................................................................................ACCTGGATTGTCACCTTTTTGAGTA............................................................. | 25 | 3 | 2 | 0.50 | 1 | 0 | 1 |
| ..............................................................................................................GTCACCTTTTTGAGTAGT........................................................... | 18 | 1 | 6 | 0.33 | 2 | 2 | 0 |
| ...........................................................................................................ATTGTCACCTTTTTAAGTA............................................................. | 19 | 1 | 4 | 0.25 | 1 | 0 | 1 |
| ................................................................................................................CACCTTTTTGAGTAG............................................................ | 15 | 0 | 6 | 0.17 | 1 | 1 | 0 |
| .......................................................................................................GTTAATTGTCACCTTTTTGAGTA............................................................. | 23 | 3 | 6 | 0.17 | 1 | 0 | 1 |
| ...........................................................................................................ATTGTCACCTTTTTGAGGA............................................................. | 19 | 1 | 8 | 0.13 | 1 | 0 | 1 |
| .................................................................................................................ACCTTTTTGAGTAGAT.......................................................... | 16 | 1 | 20 | 0.05 | 1 | 1 | 0 |
| ........................................................................................................CATATTGTCACCTTTTTGAGTA............................................................. | 22 | 3 | 20 | 0.05 | 1 | 0 | 1 |
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AAGACACAACCCACCTTTGACGTGCCCACGTCTACGCGTCCCAGTGGTGGAGGTGAACTTACATCACGGGATGAGGTCTCCCACAGTGAGTGTAACGGATTTCGTACTAACAGTGGAAAAACTCATCTCGTTATGTATCGTAAATGCAAGACACACTACCGGTGCTTATATTTCAACATATTGGACC
**********************************************....(((((.(((.((((((.((((((((.((.(((...(((.....)))))).)).)))))))).)))))).))).)))))....******************************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
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Generated: 05/16/2015 at 12:26 AM