ID:

ocu_3

 Coordinate:

chrUn0002:10711575-10711656 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.7
mature
  1. chrUn0002:10687809-10687828 -
  2. chrUn0002:10711625-10711644 -
star

Sense Strand Reads

AATGTATATGAGTTTGTGTTTAGGCAGGACTGCCATCCACAGACATGCTGCGTGCAGTGCCCTACTCAAGACAGTGGCAATCATGTCTAATTAAATGTGATTGACACGTCTGTGAGTAGAGTAATGCATGAAATGTACAACATATGTGATGTGACAGTGGGGGCACTGGGTGGGGGTTAGTT
***********************************************...((((((.(((.(((((((((((.(((.(((((((((........))))))))).))))))).))))))).))).)))))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP		 GSM1528820
Adult_testes
..............................................................TACTCAAGACAGTGGCAATC.................................................................................................... 20 0 2 874.00 1748 1691 57
..............................................................TACTCAAGACAGTGGCAATCAT.................................................................................................. 22 0 2 333.50 667 312 355
..............................................................TACTCAAGACAGTGGCAATCA................................................................................................... 21 0 2 313.50 627 529 98
..............................................................TACTCAAGACAGTGGCAAT..................................................................................................... 19 0 2 198.50 397 356 41
..................................................................................................GATTGACACGTCTGTGAGTAGA.............................................................. 22 0 1 197.00 197 1 196
...................................................................................................ATTGACACGTCTGTGAGTAGA.............................................................. 21 0 1 120.00 120 2 118
..................................................................................................GATTGACACGTCTGTGAGTA................................................................ 20 0 1 66.00 66 64 2
..................................................................................................GATTGACACGTCTGTGAGTAG............................................................... 21 0 1 43.00 43 16 27
...............................................................ACTCAAGACAGTGGCAATC.................................................................................................... 19 0 2 40.50 81 77 4
.............................................................ATACTCAAGACAGTGGCAATC.................................................................................................... 21 1 3 37.00 111 110 1
..................................................................CAAGACAGTGGCAATCAT.................................................................................................. 18 0 2 33.50 67 0 67
...................................................................................................ATTGACACGTCTGTGAGTA................................................................ 19 0 1 31.00 31 31 0
...................................................................................................ATTGACACGTCTGTGAGTAGAT............................................................. 22 1 1 27.00 27 0 27
.................................................................................................TGATTGACACGTCTGTGAGTAGA.............................................................. 23 0 1 27.00 27 0 27
..................................................................................................GATTGACACGTCTGTGAGTAGAA............................................................. 23 1 1 26.00 26 0 26
..............................................................TACTCAAGACAGTGGCAA...................................................................................................... 18 0 2 22.50 45 45 0
..................................................................................................GATTGACACGTCTGTGAGT................................................................. 19 0 1 21.00 21 17 4
.................................................................................................TGATTGACACGTCTGTGAGTA................................................................ 21 0 1 18.00 18 18 0
..................................................................CAAGACAGTGGCAATCA................................................................................................... 17 0 2 16.00 32 2 30
...............................................................ACTCAAGACAGTGGCAAT..................................................................................................... 18 0 2 16.00 32 17 15
.................................................................................................TGATTGACACGTCTGTGAGT................................................................. 20 0 1 16.00 16 10 6
...................................................................................................ATTGACACGTCTGTGAGTAGAA............................................................. 22 1 1 13.00 13 0 13
.............................................................ATACTCAAGACAGTGGCAATCA................................................................................................... 22 1 2 13.00 26 21 5
..............................................................TACTCAAGACAGTGGCAATCATG................................................................................................. 23 0 2 13.00 26 7 19
.............................................................ATACTCAAGACAGTGGCAATCAT.................................................................................................. 23 1 2 11.50 23 16 7
...............................................................ACTCAAGACAGTGGCAATCA................................................................................................... 20 0 2 11.00 22 18 4
...............................................................ACTCAAGACAGTGGCAATCAT.................................................................................................. 21 0 2 10.50 21 14 7
.................................................................TCAAGACAGTGGCAATCAT.................................................................................................. 19 0 2 10.00 20 0 20
.............................................................ATACTCAAGACAGTGGCAAT..................................................................................................... 20 1 3 10.00 30 30 0
...................................................................................................ATTGACACGTCTGTGAGTAG............................................................... 20 0 1 10.00 10 2 8
..............................................................TACTCAAGACAGTGGCA....................................................................................................... 17 0 2 9.50 19 16 3
.................................................................................................TGATTGACACGTCTGTGAGTAG............................................................... 22 0 1 9.00 9 3 6
..................................................................................................GATTGACACGTCTGTGAGTAGT.............................................................. 22 1 1 9.00 9 0 9
..................................................................CAAGACAGTGGCAATC.................................................................................................... 16 0 2 7.00 14 6 8
..............................................................TACTCAAGACAGTGGCAATCATA................................................................................................. 23 1 2 6.50 13 7 6
.....................................................................................................TGACACGTCTGTGAGTAGA.............................................................. 19 0 1 6.00 6 0 6
...................................................................................................ATTGACACGTCTGTGAGT................................................................. 18 0 1 5.00 5 5 0
................................................................CTCAAGACAGTGGCAATCAT.................................................................................................. 20 0 2 4.50 9 0 9
................................................................CTCAAGACAGTGGCAATC.................................................................................................... 18 0 2 4.00 8 6 2
....................................................................................................TTGACACGTCTGTGAGTAGA.............................................................. 20 0 1 4.00 4 0 4
..................................................................................................GATTGACACGTCTGTGAGTAGAT............................................................. 23 1 1 4.00 4 0 4
..................................................................CAAGACAGTGGCAATCATG................................................................................................. 19 0 2 4.00 8 0 8
..............................................................TACTCAAGACAGTGGCAATCATT................................................................................................. 23 1 2 3.50 7 2 5
................................................................CTCAAGACAGTGGCAATCA................................................................................................... 19 0 2 3.50 7 2 5
....................................................................AGACAGTGGCAATCAT.................................................................................................. 16 0 2 3.50 7 0 7
..........................................................GGAATACTCAAGACAGTGGCAATC.................................................................................................... 24 3 3 3.33 10 10 0
..............................................................TACTCAAGACAGTGGCAATCAA.................................................................................................. 22 1 2 3.00 6 6 0
..............................................................TACTCAAGACAGTGGCAATT.................................................................................................... 20 1 2 3.00 6 6 0
...............................................................ACTCAAGACAGTGGCAATCATT................................................................................................. 22 1 2 3.00 6 0 6
............................................................AATACTCAAGACAGTGGCAATCA................................................................................................... 23 2 3 2.33 7 7 0
..................................................................................................GATTGACACGTCTGTGAGTAGC.............................................................. 22 1 1 2.00 2 0 2
..............................................................TACTCAAGACAGTGGCAATCATTGCC.............................................................................................. 26 3 1 2.00 2 2 0
..............................................................TACTCAAGACAGTGGCAATCT................................................................................................... 21 1 3 2.00 6 0 6
..................................................................................................GATTGACACGACTGTGAGTA................................................................ 20 1 1 2.00 2 2 0
.................................................................................................TGATTGACACGTCTGTGAGTAGAA............................................................. 24 1 1 2.00 2 0 2
..................................................................................................GATTGACACGTCTGTGAG.................................................................. 18 0 1 2.00 2 1 1
...............................................................ACTCAAGACAGTGGCAATCATTCGTA............................................................................................. 26 3 2 2.00 4 4 0
..........................................................GGAATACTCAAGACAGTGGCAATCA................................................................................................... 25 3 2 2.00 4 4 0
...............................................................ACTCAAGACAGTGGCAATCATTTCTA............................................................................................. 26 1 1 2.00 2 2 0
.........................................................CACCATACTCAAGACAGTGGCAAT..................................................................................................... 24 3 1 2.00 2 2 0
....................................................................................................TTGACACGTCTGTGAGTAGAA............................................................. 21 1 1 2.00 2 0 2
..............................................................CACTCAAGACAGTGGCAATC.................................................................................................... 20 1 3 1.67 5 5 0
..............................................................TACTCAAGACAGCGGCAAT..................................................................................................... 19 1 2 1.50 3 3 0
..............................................................TACTCAAGACAGTGGCAATCCT.................................................................................................. 22 1 2 1.50 3 1 2
..............................................................TACTCAAGACAGTGGCAATAA................................................................................................... 21 1 2 1.50 3 1 2
..............................................................TACTCAAGACAGGGGCAATCAT.................................................................................................. 22 1 2 1.50 3 1 2
..............................................................TACTCAAGACAGGGGCAATC.................................................................................................... 20 1 2 1.50 3 3 0
..............................................................TACTCAAGACAGTGGCAATCATGT................................................................................................ 24 0 2 1.50 3 3 0
..............................................................TACTCAAGACAGTGGCAATA.................................................................................................... 20 1 2 1.50 3 3 0
..............................................................TAATCAAGACAGTGGCAATC.................................................................................................... 20 1 2 1.50 3 3 0
..............................................................TACTCAAGACAGCGGCAATC.................................................................................................... 20 1 2 1.50 3 3 0
...................................................................AAGACAGTGGCAATCATG................................................................................................. 18 0 2 1.50 3 0 3
................................................................CTCAAGACAGTGGCAATCATG................................................................................................. 21 0 2 1.50 3 0 3
.................................................................TCAAGACAGTGGCAATC.................................................................................................... 17 0 2 1.50 3 1 2
..............................................................TACTCGAGACAGTGGCAATC.................................................................................................... 20 1 2 1.00 2 2 0
................................................................................................ATGATTGACACGTCTGTGAGT................................................................. 21 1 2 1.00 2 0 2
..............................................................AACTCAAGACAGTGGCAATC.................................................................................................... 20 1 2 1.00 2 2 0
.................................................................................................TGATTGAAACGTCTGTGAGTAGA.............................................................. 23 1 1 1.00 1 0 1
..............................................................TACCCAAGACAGTGGCAATCAT.................................................................................................. 22 1 2 1.00 2 2 0
............................................................AATACTCAAGACAGTGGCAATCAT.................................................................................................. 24 2 2 1.00 2 1 1
.........................................................TGTCATACTCAAGACAGTGGCAATC.................................................................................................... 25 2 1 1.00 1 1 0
...................................................................................................ATTGACCCGTCTGTGAGTAGAT............................................................. 22 2 1 1.00 1 0 1
..............................................................TACTAAAGACAGTGGCAATC.................................................................................................... 20 1 2 1.00 2 2 0
..............................................................TACACAAGACAGTGGCAATC.................................................................................................... 20 1 2 1.00 2 2 0
................................................................................................ATGATTGACACGTCTGTGAGTA................................................................ 22 1 1 1.00 1 1 0
..............................................................TACTCAAGACAGTGGCAATCATTGC............................................................................................... 25 2 1 1.00 1 1 0
.........................................................TGCCCTACTCAAGACAGTGGCAAT..................................................................................................... 24 0 1 1.00 1 1 0
............................................................GTTACTCAAGACAGTGGCAATCA................................................................................................... 23 2 2 1.00 2 2 0
..............................................................TACTCGAGACAGTGGCAATCAT.................................................................................................. 22 1 2 1.00 2 1 1
.................................................................................................TGATTGACACGTCTGTGAGTAGT.............................................................. 23 1 1 1.00 1 0 1
..................................................................................................AATTGACACGTCTGTGAGTAGA.............................................................. 22 1 1 1.00 1 0 1
..............................................................TACTCAAGCCAGTGGCAATCAT.................................................................................................. 22 1 2 1.00 2 1 1
..........................................................GGAATACTCAAGACAGTGGCAAT..................................................................................................... 23 3 4 1.00 4 4 0
..................................................................................................GAATGACACGTCTGTGAGTAGAA............................................................. 23 2 1 1.00 1 0 1
..................................................................................................GATTGACACGTCTGTTAGTA................................................................ 20 1 1 1.00 1 1 0
..............................................................TACTCAAGACCGTGGCAATCA................................................................................................... 21 1 2 1.00 2 2 0
.................................................................................................AGATTGACACGTCTGTGAGTA................................................................ 21 1 1 1.00 1 1 0
.............................................................ATACTCAAGACAGTGGCAATCATGTCGTA............................................................................................ 29 3 1 1.00 1 1 0
...................................................................................................ATTGACACGTTTGTGAGTAGA.............................................................. 21 1 1 1.00 1 0 1
............................................................CTTACTCAAGACAGTGGCAATCATTC................................................................................................ 26 3 1 1.00 1 1 0
..................................................................................................GATTGACAAGTCTGTGAGTAGAA............................................................. 23 2 1 1.00 1 0 1
..................................................................................................GATTGACCCGTCTGTGAGTAGA.............................................................. 22 1 1 1.00 1 0 1
.........................................................CGCCATACTCAAGACAGTGGCAAT..................................................................................................... 24 2 1 1.00 1 1 0
...............................................................ACTCAAGACAGTGGCAATCATTGC............................................................................................... 24 2 1 1.00 1 1 0
................................................................CTCAAGACAGTGGCAAT..................................................................................................... 17 0 2 1.00 2 1 1
..................................................................................................GATTGACACGCCTGTGAGTA................................................................ 20 1 1 1.00 1 1 0
..............................................................TACTCAAGACAGTGGC........................................................................................................ 16 0 3 1.00 3 3 0
..............................................................TAATCAAGACAGTGGCAATCAT.................................................................................................. 22 1 2 1.00 2 1 1
..................................................................................................GCTTGACACGTCTGTGAGTAGA.............................................................. 22 1 1 1.00 1 0 1
.................................................................................................AGATTGACACGTCTGTGAGT................................................................. 20 1 1 1.00 1 1 0
.............................................................ATACTCAAGACAGTGGCAATCATTAC............................................................................................... 26 3 1 1.00 1 1 0
.......................................................AGGAGCCTACTCAAGACAGTGGCAATC.................................................................................................... 27 3 1 1.00 1 1 0
...................................................................AAGACAGTGGCAATCAT.................................................................................................. 17 0 2 1.00 2 0 2
..............................................................TACTCAAGATAGTGGCAAT..................................................................................................... 19 1 2 1.00 2 0 2
.....................................................................................................TGACACGTCTGTGAGTAG............................................................... 18 0 1 1.00 1 0 1
..................................................................................................GATTGGCACGTCTGTGAGTA................................................................ 20 1 1 1.00 1 1 0
..............................................................TGCTCAAGACAGTGGCAATC.................................................................................................... 20 1 2 1.00 2 2 0
....................................................................................................TTGACACGTCTGTGAGTAGAT............................................................. 21 1 1 1.00 1 0 1
...............................................................ACTCAAGACAGGGGCAATCATTTCTA............................................................................................. 26 2 1 1.00 1 1 0
...................................................................................................ATTGACACGGCTGTGAGTAGA.............................................................. 21 1 1 1.00 1 0 1
..................................................................................................GATTGACCCGTCTGTGAGTA................................................................ 20 1 1 1.00 1 1 0
................................................................................................ATGATTGACACGTCTGTGAGCA................................................................ 22 2 1 1.00 1 1 0
..................................................................................................GATTGACACGTCTGTGAGTATT.............................................................. 22 2 1 1.00 1 0 1
..............................................................GACTCAAGACAGTGGCAATC.................................................................................................... 20 1 2 1.00 2 2 0
.........................................................TCTCCTACTCAAGACAGTGGCAATCA................................................................................................... 26 2 1 1.00 1 1 0
..................................................................................................GATTGACACGTTTGTGAGTA................................................................ 20 1 1 1.00 1 1 0
...................................................................................................ATTGACACGTCTGTGAGTCGAC............................................................. 22 2 1 1.00 1 0 1
.........................................................TTGCGTACTCAAGACAGTGGCAATC.................................................................................................... 25 3 1 1.00 1 1 0
..............................................................TACTCAAGACAGTGGCAATCATC................................................................................................. 23 1 2 1.00 2 0 2
.................................................................TCAAGACAGTGGCAATCA................................................................................................... 18 0 2 1.00 2 0 2
..............................................................TACTCAAGACAGTGGCAATCATCGC............................................................................................... 25 2 1 1.00 1 1 0
.........................................................TGGCGTACTCAAGACAGTGGCAATC.................................................................................................... 25 2 1 1.00 1 1 0
.................................................................................................AGATTGACACGTCTGTGAGTAG............................................................... 22 1 1 1.00 1 1 0
..................................................................................................GATTGACACGTCTGGGAGTA................................................................ 20 1 1 1.00 1 1 0
...................................................................................................ATTGACACGTCTGTGAGTAGAC............................................................. 22 1 1 1.00 1 0 1
..................................................................................................GATTGACACGTCTGTGAGGAGA.............................................................. 22 1 1 1.00 1 0 1
...........................................................TCCTACTCAAGACAGTGGCAATC.................................................................................................... 23 1 1 1.00 1 1 0
............................................................CTTACTCAAGACAGTGGCAATCA................................................................................................... 23 1 1 1.00 1 1 0
..................................................................CAAGACAGTGGCAAT..................................................................................................... 15 0 9 0.78 7 2 5
..........................................................GAAGTACTCAAGACAGTGGCAATC.................................................................................................... 24 3 3 0.67 2 2 0
..............................................................TACTCAAGACAGTGGAAATC.................................................................................................... 20 1 2 0.50 1 1 0
...........................................................GGTTACTCAAGACAGTGGCAATC.................................................................................................... 23 3 2 0.50 1 1 0
.............................................................ATACTCAAGACAGTGGCAATCATGT................................................................................................ 25 1 2 0.50 1 1 0
..........................................................GGAATACTCAAGACAGTGGCAATCAT.................................................................................................. 26 3 2 0.50 1 1 0
............................................................ACTACTCAAGACAGTGGCAATC.................................................................................................... 22 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAATCATTT................................................................................................ 24 1 2 0.50 1 1 0
...............................................................ACTCAAGACAGTGGCAATCAA.................................................................................................. 21 1 2 0.50 1 1 0
..............................................................TACTGAAGACAGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGGGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................CACTCAAGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTAGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACCGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAACC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGATAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
............................................................AGTACTCAAGACAGTGGCAATC.................................................................................................... 22 2 4 0.50 2 2 0
..........................................................GAACTACTCAAGACAGTGGCAAT..................................................................................................... 23 2 2 0.50 1 1 0
..................................................................................................GATTGACACGTCTGTG.................................................................... 16 0 2 0.50 1 0 1
........................................................GGGCACTACTCAAGACAGTGGCAATC.................................................................................................... 26 2 2 0.50 1 1 0
..............................................................TACTCAAGACTGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................TAGTCAAGACAGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
...............................................................ATTCAAGACAGTGGCAATC.................................................................................................... 19 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCACTC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAATCAC.................................................................................................. 22 1 2 0.50 1 0 1
.............................................................ATACTCAAGACAGCGGCAATCA................................................................................................... 22 2 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGGAATC.................................................................................................... 20 1 2 0.50 1 1 0
.............................................................ATACTCAAGCCAGTGGCAATCAT.................................................................................................. 23 2 2 0.50 1 0 1
..............................................................CACTCAAGACAGTGGCAATCAT.................................................................................................. 22 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGCGGCAATCAT.................................................................................................. 22 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAATCATGTT............................................................................................... 25 1 2 0.50 1 1 0
...........................................................ACATACTCAAGACAGTGGCAAT..................................................................................................... 22 2 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAACCATG................................................................................................. 23 1 2 0.50 1 1 0
..................................................................CACGACAGTGGCAATCAT.................................................................................................. 18 1 2 0.50 1 0 1
..............................................................TACTCAAGACAGAGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGAAATCA................................................................................................... 21 1 2 0.50 1 1 0
........................................................ATGCAATACTCAAGACAGTGGCAATC.................................................................................................... 26 3 2 0.50 1 1 0
..............................................................TACTCAAAACAGTGGCAATCAT.................................................................................................. 22 1 2 0.50 1 1 0
..............................................................TACTTAAGACAGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACGGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAATACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................TAGTCAAGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................TACTCGAGACAGTGGCAAT..................................................................................................... 19 1 2 0.50 1 1 0
..............................................................TACTAAAGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
...........................................................CGGTACTCAAGACAGTGGCAATCA................................................................................................... 24 2 2 0.50 1 1 0
..............................................................TACTCACGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................TACTCAAGGCAGTGGCAATCAT.................................................................................................. 22 1 2 0.50 1 0 1
.............................................................CTACTCAAGACAGTGGCAATCAT.................................................................................................. 23 0 2 0.50 1 0 1
..................................................................CAAGACAGTGGCAATCATGT................................................................................................ 20 0 2 0.50 1 0 1
..............................................................TATTCAAGACAGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAATCTCGT................................................................................................ 24 2 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGCAATCTT.................................................................................................. 22 1 2 0.50 1 1 0
..............................................................TACGCAAGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 0 1
..............................................................TCCTCAAGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGGTAATCA................................................................................................... 21 1 2 0.50 1 0 1
..............................................................TACTCAAGACAGTGGCAATCATGCTT.............................................................................................. 26 2 2 0.50 1 1 0
.............................................................ATACTTAAGACAGTGGCAATCATG................................................................................................. 24 2 2 0.50 1 1 0
..........................................................GTAATACTCAAGACAGTGGCAATCA................................................................................................... 25 3 2 0.50 1 1 0
.................................................................TCAAGACAGTGGCAAT..................................................................................................... 16 0 2 0.50 1 1 0
..............................................................TACTCAAGACAGCGGCAATCA................................................................................................... 21 1 2 0.50 1 0 1
..............................................................TACTCAAGACAGTTGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACCCAAGACAGTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
...............................................................ACTCAAGACAGTGGCAATCTT.................................................................................................. 21 1 2 0.50 1 1 0
..............................................................GACTCAAGACAGTGGCAATCAT.................................................................................................. 22 1 2 0.50 1 1 0
..............................................................TCCTCAAGACAGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
..............................................................TACTCAATCCAGTGGCAATCAT.................................................................................................. 22 2 2 0.50 1 1 0
..............................................................TACTCAAGACAGTGTCAATCAT.................................................................................................. 22 1 2 0.50 1 0 1
..............................................................TACTCAAGACATTGGCAATCA................................................................................................... 21 1 2 0.50 1 1 0
...............................................................ACTCAAGACAGTGGCAATCATGT................................................................................................ 23 0 2 0.50 1 1 0
..............................................................TACTCAACACAGTGGCAATC.................................................................................................... 20 1 2 0.50 1 1 0
.................................................................TCAAGACAGTGGCAATCATT................................................................................................. 20 1 2 0.50 1 0 1
...........................................................GACTACTCAAGACAGTGGCAATCA................................................................................................... 24 2 2 0.50 1 1 0
.....................................................................GACAGTGGCAATCAT.................................................................................................. 15 0 5 0.40 2 2 0
.............................................................ATACTCAAGTCAGTGGCAATC.................................................................................................... 21 2 3 0.33 1 1 0
..............................................................TACTCAAGACAGTGGCCATCA................................................................................................... 21 1 3 0.33 1 1 0
...........................................................GAATACTCAAGACAGTGGCAATCA................................................................................................... 24 3 3 0.33 1 1 0
.............................................................ATACTCAAGACAGCGGCAAT..................................................................................................... 20 2 3 0.33 1 1 0
..............................................................TACTCAAGACAGTGACAATCA................................................................................................... 21 1 3 0.33 1 1 0
.............................................................TTACTCAAGACAGTGGCAAT..................................................................................................... 20 1 3 0.33 1 1 0
..............................................................TACTCAAGCCAGTGGCAATC.................................................................................................... 20 1 3 0.33 1 0 1
..............................................................TACTCAAGAGAGTGGCAAT..................................................................................................... 19 1 3 0.33 1 1 0
.............................................................TAACTCAAGACAGTGGCAATC.................................................................................................... 21 2 3 0.33 1 1 0
..................................................................CAAGACAGTGGCAATCAC.................................................................................................. 18 1 3 0.33 1 0 1
..............................................................TACCCAAGACAGTGGCAATC.................................................................................................... 20 1 3 0.33 1 1 0
...........................................................CAATACTCAAGACAGTGGCAATC.................................................................................................... 23 2 3 0.33 1 1 0
...............................................................ACTCAAGACAGTGGCAA...................................................................................................... 17 0 3 0.33 1 1 0
..............................................................TACTCAAGGCAGTGGCAATC.................................................................................................... 20 1 3 0.33 1 1 0
..............................................................TACCCAAGACAGTGGCAAT..................................................................................................... 19 1 4 0.25 1 1 0
..............................................................TACTCAAGACAGTGACAATC.................................................................................................... 20 1 4 0.25 1 1 0
.............................................................ATACTCAAGACAGTGGCAA...................................................................................................... 19 1 4 0.25 1 1 0
.............................................................ATACTCAAGACAGTGGCACTC.................................................................................................... 21 2 4 0.25 1 1 0
...........................................................TGTTACTCAAGACAGTGGCAATCA................................................................................................... 24 3 4 0.25 1 1 0
...............................................................ACTCAAGACAGTGGCAATCAAA................................................................................................. 22 2 5 0.20 1 1 0
..........................................................CAACTACTCAAGACAGTGGCAAT..................................................................................................... 23 3 5 0.20 1 1 0
...............................................................ACTCAAGACAGTGGC........................................................................................................ 15 0 11 0.18 2 0 2
...........................................................TGTTACTCAAGACAGTGGCAATC.................................................................................................... 23 3 6 0.17 1 1 0
..............................................................TACTCAAGACAGCGGCA....................................................................................................... 17 1 6 0.17 1 1 0
.............................................................ATACTAAAGACAGTGGCAATC.................................................................................................... 21 2 6 0.17 1 1 0
...................................................................AAGACAGTGGCAATC.................................................................................................... 15 0 7 0.14 1 1 0
....................................................................AGACAGTGGCAATCA................................................................................................... 15 0 8 0.13 1 0 1
.............................................................ATACTCAAGACAGTGGCAATA.................................................................................................... 21 2 8 0.13 1 1 0
..............................................................TACTCAAGACAGTGGCAATTT................................................................................................... 21 2 8 0.13 1 0 1
..............................................................TACACAAGACAGTGGCAA...................................................................................................... 18 1 10 0.10 1 1 0
..................................................................CAAGACAGTTGCAATCAT.................................................................................................. 18 1 11 0.09 1 0 1
...................................................................AAGACAGTGGCAATCATA................................................................................................. 18 1 11 0.09 1 0 1
.................................................................ACAAGACAGTGGCAATC.................................................................................................... 17 1 17 0.06 1 1 0
...............................................................ACTCAATACAGTGGCAA...................................................................................................... 17 1 18 0.06 1 1 0

Anti-sense strand reads

TTACATATACTCAAACACAAATCCGTCCTGACGGTAGGTGTCTGTACGACGCACGTCACGGGATGAGTTCTGTCACCGTTAGTACAGATTAATTTACACTAACTGTGCAGACACTCATCTCATTACGTACTTTACATGTTGTATACACTACACTGTCACCCCCGTGACCCACCCCCAATCAA
***********************************************...((((((.(((.(((((((((((.(((.(((((((((........))))))))).))))))).))))))).))).)))))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:26 AM