ID:

ocu_26

Coordinate:

chrUn0002:9277869-9277953 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature
star
  1. chrUn0002:9274577-9274596 -
  2. chrUn0002:9277887-9277906 -
  3. chrUn0002:9285649-9285668 -

Sense Strand Reads

TGTAGGGGGAACATAAATTCTTAAGGGAGAGCACCTTCAAATTAATGCAGTGTGCATTGCTCTACCTAGAAGGGCACTAGAATGTGGATCAATGAGCTTCCTGTACCCTTCTGGGTATAGTACGGCTCGCCTATCAAAAGTCTATGTGCCCTCCAGTTAGGAAGTCAATGTGGAGCCTCTAACGC
***********************************************..(((.((..((((.((((((((((((.((..(((.((..........)))))..)).)))))))))))).))))..)).)))..*****************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP
GSM1528820
Adult_testes
..............................................................TACCTAGAAGGGCACTAGAAT...................................................................................................... 21 0 1 4.00 4 4 0
..............................................................TACCTAGAAGGGCACTAGAATGT.................................................................................................... 23 0 1 3.00 3 0 3
...............................................................ACCTAGAAGGGCACTAGAAT...................................................................................................... 20 0 1 2.00 2 1 1
..............................................................TACCTAGAAGGACACTAGAAT...................................................................................................... 21 1 1 2.00 2 0 2
.................................................................................................TTCCTGTACCCTTCTGGGTA.................................................................... 20 0 3 1.33 4 3 1
..............................................................TACCTAGCAGGGCACTAGAAT...................................................................................................... 21 1 1 1.00 1 1 0
................................................................................................ATTCCTGTACCCTTCTGGGTA.................................................................... 21 1 3 0.67 2 2 0
.................................................................................................TTCCTGTACCCTTCTGGGT..................................................................... 19 0 3 0.67 2 2 0
.....................................................................................................TGTACCCTTCTGGGTA.................................................................... 16 0 3 0.33 1 0 1

Anti-sense strand reads

ACATCCCCCTTGTATTTAAGAATTCCCTCTCGTGGAAGTTTAATTACGTCACACGTAACGAGATGGATCTTCCCGTGATCTTACACCTAGTTACTCGAAGGACATGGGAAGACCCATATCATGCCGAGCGGATAGTTTTCAGATACACGGGAGGTCAATCCTTCAGTTACACCTCGGAGATTGCG
*****************************************************..(((.((..((((.((((((((((((.((..(((.((..........)))))..)).)))))))))))).))))..)).)))..***********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:27 AM