ID:

ocu_10

 Coordinate:

chrUn0002:9301737-9301809 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.5
mature
  1. chrUn0002:9297779-9297799 -
  2. chrUn0002:9301746-9301766 -
star
  1. chrUn0002:9297814-9297834 -
  2. chrUn0002:9301781-9301801 -

Sense Strand Reads

AGGGGATGGTGGAGCCTGATGGGCCAGCAGCTTGACATTCGTGATGTGTGCAGTGCCCTACTCAGAGCGGGACTGGAATGTGAACCTCTGAGCATCCAGGACCTCTCTGGGTAGAGCAAGGCTCACCAAGTACATCATCACTGGTGACCTCTGTACTGGTGGTGGGAGTGCAA
*******************************************..(((.((..(((.((((((((((.((..(((((.(((..........))))))))..)).)))))))))).)))..)).)))...******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
.............................................................................................ATCCAGGACCTCTCTGGGTAG........................................................... 21 0 2 1350.50 2701 2697 4
.............................................................................................ATCCAGGACCTCTCTGGGTAGT.......................................................... 22 1 2 1080.00 2160 2159 1
.............................................................................................ATCCAGGACCTCTCTGGGTAGAT......................................................... 23 1 2 882.50 1765 1765 0
.............................................................................................ATCCAGGACCTCTCTGGGT............................................................. 19 0 2 326.50 653 595 58
.............................................................................................ATCCAGGACCTCTCTGGGTA............................................................ 20 0 2 247.00 494 315 179
.............................................................................................ATCCAGGACCTCTCTGGGTAT........................................................... 21 1 2 199.50 399 399 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGA.......................................................... 22 0 2 111.50 223 218 5
..........................................................TACTCAGAGCGGGACTGGAAT.............................................................................................. 21 0 2 110.00 220 3 217
.............................................................................................ATCCAGGACCTCTCTGGGTAGAC......................................................... 23 1 2 83.50 167 167 0
.............................................................................................ATCCAGGACCTCTCTGGGTAA........................................................... 21 1 2 45.00 90 90 0
..............................................................................................TCCAGGACCTCTCTGGGTAGT.......................................................... 21 1 2 24.00 48 48 0
..............................................................................................TCCAGGACCTCTCTGGGTAG........................................................... 20 0 2 23.00 46 46 0
..............................................................................................TCCAGGACCTCTCTGGGTAGAT......................................................... 22 1 2 23.00 46 46 0
..........................................................TACTCAGAGCGGGACTGGAATGT............................................................................................ 23 0 2 14.00 28 8 20
..........................................................TACTCAGAGCGGGACTGGAATG............................................................................................. 22 0 2 14.00 28 0 28
.............................................................................................ATCCAGGACCTCTCTGGGTAGAA......................................................... 23 1 2 14.00 28 28 0
.............................................................................................ATCCAGGACCTCTCTGGG.............................................................. 18 0 2 13.50 27 27 0
.............................................................................................ATCCAGGACCTCTCTGGGTAAT.......................................................... 22 2 3 13.00 39 39 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGC.......................................................... 22 1 2 11.50 23 23 0
.............................................................................................ATCCAGGACCTCTCTGGGCAG........................................................... 21 1 2 11.00 22 22 0
...........................................................ACTCAGAGCGGGACTGGAAT.............................................................................................. 20 0 2 8.00 16 0 16
.............................................................................................ATCCAGGACCTCTCTGGGTT............................................................ 20 1 3 8.00 24 23 1
...............................................................................................CCAGGACCTCTCTGGGTAGT.......................................................... 20 1 3 6.67 20 20 0
..............................................................................................TCCAGGACCTCTCTGGGTAGA.......................................................... 21 0 2 6.50 13 13 0
...............................................................................................CCAGGACCTCTCTGGGTAGAT......................................................... 21 1 2 5.50 11 11 0
............................................................................................AATCCAGGACCTCTCTGGGTAG........................................................... 22 1 2 5.50 11 11 0
..............................................................................................TCCAGGACCTCTCTGGGTAGAC......................................................... 22 1 2 5.00 10 10 0
............................................................................................AATCCAGGACCTCTCTGGGTA............................................................ 21 1 2 5.00 10 1 9
.........................................................ATACTCAGAGCGGGACTGGAAT.............................................................................................. 22 1 2 5.00 10 0 10
.............................................................................................ATCCAGGACCTTTCTGGGTAG........................................................... 21 1 3 4.00 12 12 0
..........................................................TACTCAGAGCGGGACTGGA................................................................................................ 19 0 2 4.00 8 0 8
.............................................................................................ATCCAGGACCTCTCTGGGTAGTT......................................................... 23 2 3 3.67 11 11 0
...............................................................................................CCAGGACCTCTCTGGGTAG........................................................... 19 0 2 3.50 7 7 0
..............................................................................................TCCAGGACCTCTCTGGGTA............................................................ 19 0 2 3.50 7 6 1
...............................................................................................CCAGGACCTCTCTGGGTAGA.......................................................... 20 0 2 3.50 7 7 0
.............................................................................................ATCCAGGACCTCTCTGGGTAAA.......................................................... 22 1 2 3.50 7 7 0
.............................................................................................ATCCAGGACCCCTCTGGGTAGT.......................................................... 22 2 2 3.50 7 7 0
............................................................................................AATCCAGGACCTCTCTGGGTAGAT......................................................... 24 2 2 3.50 7 7 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGAG......................................................... 23 0 2 3.00 6 6 0
.............................................................................................ATCCAGGACCTCTCTGGGGAG........................................................... 21 1 3 2.67 8 8 0
..........................................................TACTCAGAGCGGGACTGGAA............................................................................................... 20 0 2 2.50 5 1 4
.............................................................................................ATCCAGGACCTCTCTGGGTAC........................................................... 21 1 2 2.50 5 5 0
.............................................................................................ATCCCGGACCTCTCTGGGTAG........................................................... 21 1 2 2.50 5 5 0
.............................................................................................ATCCAGGACTTCTCTGGGTAG........................................................... 21 1 2 2.50 5 5 0
.............................................................................................ATCCAGGACCTCTCCGGGTAGT.......................................................... 22 2 2 2.50 5 5 0
.............................................................................................ATCCAGGCCCTCTCTGGGTAGAT......................................................... 23 2 3 2.33 7 7 0
.............................................................................................ATCCAGGACCTCTCTGGGCAGT.......................................................... 22 2 3 2.33 7 7 0
..........................................................TACTCAGAGTGGGACTGGAAT.............................................................................................. 21 1 2 2.00 4 1 3
..............................................................................................TCCAGGACCTCTCTGGGT............................................................. 18 0 2 2.00 4 2 2
.............................................................................................ATCCAGGACCTTTCTGGGTAGT.......................................................... 22 2 3 2.00 6 6 0
.................................................................................................AGGACCTCTCTGGGTAG........................................................... 17 0 2 2.00 4 4 0
.............................................................................................ATCCAGGACCTCTCTGG............................................................... 17 0 2 2.00 4 4 0
.........................................................ATACTCAGAGCGGGACTGGAATGT............................................................................................ 24 1 2 2.00 4 0 4
.............................................................................................ATCCAGGGCCTCTCTGGGTAGAT......................................................... 23 2 2 2.00 4 4 0
.............................................................................................ATCCAGGACCTCTCTGGGAAG........................................................... 21 1 2 2.00 4 4 0
.............................................................................................ATCCAGGACCTCTCTGGGTATT.......................................................... 22 2 2 2.00 4 4 0
.............................................................................................ATCTAGGACCTCTCTGGGTAGAT......................................................... 23 2 2 2.00 4 4 0
.............................................................................................ATCCAGGACCTTTCTGGGTAGAT......................................................... 23 2 4 1.75 7 7 0
.............................................................................................ATCCAGGACCTCTCTGGGCAGAT......................................................... 23 2 2 1.50 3 3 0
........................................................AATACTCAGAGCGGGACTGGAAT.............................................................................................. 23 2 2 1.50 3 0 3
.............................................................................................ATCAAGGACCTCTCTGGGTAGT.......................................................... 22 2 2 1.50 3 3 0
..........................................................TACTCAGAGCGGGACTGGAATGTT........................................................................................... 24 1 2 1.50 3 0 3
.............................................................................................ATCCGGGACCTCTCTGGGTAGT.......................................................... 22 2 2 1.50 3 3 0
.............................................................................................ATCAAGGACCTCTCTGGGTAG........................................................... 21 1 2 1.50 3 3 0
.............................................................................................ATCCAGGACCCCTCTGGGTAG........................................................... 21 1 2 1.50 3 3 0
.............................................................................................ATCCAGGAACTCTCTGGGTAG........................................................... 21 1 2 1.50 3 3 0
..............................................................CAGAGCGGGACTGGAATGT............................................................................................ 19 0 2 1.50 3 3 0
..............................................................................................TCCAGGACCTCTCTGGGTAA........................................................... 20 1 2 1.50 3 3 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGTA......................................................... 23 2 2 1.50 3 3 0
.............................................................................................ATCCAGGACCTCTCTGGGGA............................................................ 20 1 3 1.33 4 3 1
.............................................................................................ATCCAGGACCTTTCTGGGTA............................................................ 20 1 3 1.33 4 3 1
.............................................................................................ATCCAGGCCCTCTCTGGGTAGT.......................................................... 22 2 3 1.33 4 4 0
.............................................................................................ATCCAGGACCTCTCTGGGAAGT.......................................................... 22 2 3 1.33 4 4 0
.............................................................................................ATCCAGGACTTCTCTGGGTAGT.......................................................... 22 2 4 1.25 5 5 0
.............................................................................................ATCCAGGACCTCTCTGGGGAGT.......................................................... 22 2 4 1.25 5 5 0
.............................................................................................ATCCAGGACCTCTCTGGA.............................................................. 18 1 9 1.22 11 11 0
.............................................................................................ATCCAGGACCTCTCTG................................................................ 16 0 4 1.00 4 4 0
.............................................................................................ATCCAGGACCTCTATGGGTAGAT......................................................... 23 2 2 1.00 2 2 0
.............................................................................................ATCTAGGACCTCTCTGGGTAG........................................................... 21 1 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGTG......................................................... 23 1 2 1.00 2 2 0
................................................................................................CAGGACCTCTCTGGGTAG........................................................... 18 0 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGAAGAT......................................................... 23 2 2 1.00 2 2 0
...............................................................................................CCAGGACCTCTCTGGGTA............................................................ 18 0 2 1.00 2 1 1
.............................................................................................ATCCAGGACCTCTCCGGGTAGAT......................................................... 23 2 2 1.00 2 2 0
.............................................................................................ATCCGGGACCTCTCTGGGTAGA.......................................................... 22 1 2 1.00 2 2 0
.............................................................................................ATCCATGACCTCTCTGGGTAG........................................................... 21 1 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGAGAT....................................................... 25 2 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGCA............................................................ 20 1 2 1.00 2 2 0
.............................................................................................ATCCCGGACCTCTCTGGGTAGAT......................................................... 23 2 2 1.00 2 2 0
.............................................................................................ATCCAGGGCCTCTCTGGGTAG........................................................... 21 1 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGATC........................................................ 24 1 1 1.00 1 1 0
.............................................................................................ATCCCGGACCTCTCTGGGTAGT.......................................................... 22 2 2 1.00 2 2 0
.............................................................................................ATCGAGGACCTCTCTGGGTAG........................................................... 21 1 2 1.00 2 2 0
.............................................................................................ATACAGGACCTCTCTGGGTAGAT......................................................... 23 2 2 1.00 2 2 0
............................................................................................TATCCAGGACCTCTCTGGGTAGAT......................................................... 24 2 2 1.00 2 2 0
.............................................................................................ATCCAAGACCTCTCTGGGTAG........................................................... 21 1 2 1.00 2 2 0
..........................................................TACTCAGAGCGGGACTGGAATGTA........................................................................................... 24 1 2 1.00 2 0 2
.............................................................................................ATCCAGGACCCCTCTGGGTAGA.......................................................... 22 1 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGAAC........................................................ 24 1 1 1.00 1 1 0
.............................................................................................ATCCAGGACTTCTCTGGGTAGAT......................................................... 23 2 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGGAGAT......................................................... 23 2 5 1.00 5 5 0
.............................................................................................ATCCCGGACCTCTCTGGGTA............................................................ 20 1 2 1.00 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGCAGAC......................................................... 23 2 2 1.00 2 2 0
............................................................................................AATCCAGGACCTCTCTGGGT............................................................. 20 1 2 1.00 2 2 0
.............................................................................................ATCCGGGACCTCTCTGGGTAGAT......................................................... 23 2 2 1.00 2 2 0
.............................................................................................ATCCAGGCCCTCTCTGGGTAG........................................................... 21 1 3 1.00 3 3 0
.............................................................................................ATCCAGGACCTCTCTGGGC............................................................. 19 1 4 1.00 4 4 0
.............................................................................................ATCCAGGACCTCTCTGGGCAT........................................................... 21 2 4 1.00 4 4 0
.............................................................................................ATCCAGGACCTCTCTGGGA............................................................. 19 1 4 0.75 3 3 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGCT......................................................... 23 2 3 0.67 2 2 0
..................................................................................................GGACCTCTCTGGGTAGAT......................................................... 18 1 3 0.67 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGAAAC....................................................... 25 3 3 0.67 2 2 0
.............................................................................................ATCCAGGGCCTCTCTGGGTAGT.......................................................... 22 2 3 0.67 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGAAA........................................................ 24 2 3 0.67 2 2 0
.............................................................................................ATCCAGCACCTCTCTGGGTAGAC......................................................... 23 2 3 0.67 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTCGT.......................................................... 22 2 3 0.67 2 2 0
..............................................................................................TCCAGGACCTCTCTGGGTAT........................................................... 20 1 3 0.67 2 2 0
.............................................................................................ATGCAGGACCTCTCTGGGTAGT.......................................................... 22 2 2 0.50 1 1 0
............................................................................................CATCCAGGACCTCTCTGGGTA............................................................ 21 0 2 0.50 1 0 1
..........................................................TACTCAAAGCGGGACTGGAAT.............................................................................................. 21 1 2 0.50 1 0 1
.............................................................................................ATCCAGGAACTCTCTGGGTAGA.......................................................... 22 1 2 0.50 1 1 0
......................................................GGCCTACTCAGAGCGGGACTGGA................................................................................................ 23 1 2 0.50 1 0 1
...........................................................ACTCAGAGCGGGACTGGAATTT............................................................................................ 22 1 2 0.50 1 0 1
..........................................................TACTCAGAGCGGGACTGG................................................................................................. 18 0 2 0.50 1 0 1
..........................................................TACTCAGAGCGGGACCGGAAT.............................................................................................. 21 1 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTCTCTGGATAGAT......................................................... 23 2 2 0.50 1 1 0
...........................................................ACTCAGAGCGGGACTGGAATG............................................................................................. 21 0 2 0.50 1 0 1
.............................................................................................ATCCAGTACCTCTCTGGGTAA........................................................... 21 2 4 0.50 2 2 0
.............................................................................................ATCCAGGACGTCTCTGGGTAGT.......................................................... 22 2 2 0.50 1 1 0
..................................................................................................GGACCTCTCTGGGTAG........................................................... 16 0 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGG............................................................. 19 1 6 0.50 3 3 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGATGAT...................................................... 26 3 2 0.50 1 1 0
.............................................................................................ATACAGGACCTCTCTGGGTAGT.......................................................... 22 2 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTAGGTAGAT......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ACCCAGGACCTCTCTGGGTAGAT......................................................... 23 2 2 0.50 1 1 0
...........................................................ACTCAGAGCGGGACTGGAATGT............................................................................................ 22 0 2 0.50 1 0 1
.............................................................................................ATCCCGGACCTCTCTGGGTAGA.......................................................... 22 1 2 0.50 1 1 0
.........................................................ATACTCAGAGCGGGACTGGA................................................................................................ 20 1 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTATCTGGGTAGT.......................................................... 22 2 2 0.50 1 1 0
.............................................................................................ATCCACGACCTCTCTGGGTAG........................................................... 21 1 2 0.50 1 1 0
..........................................................TACTCAGAGTGGGACTGGAA............................................................................................... 20 1 2 0.50 1 0 1
.........................................................ATACTCAGAGCGGGACTGGAATGTT........................................................................................... 25 2 2 0.50 1 0 1
.........................................................ATACTCAGAGCGGGACTGGAATG............................................................................................. 23 1 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTCTATGGGTAG........................................................... 21 1 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGTATAT......................................................... 23 2 2 0.50 1 1 0
..........................................................CACTCAGAGCGGGACTGGAAT.............................................................................................. 21 1 2 0.50 1 0 1
............................................................................................AATCCAGGACCTCTCTGGGTAGAC......................................................... 24 2 2 0.50 1 1 0
............................................................................................CATCCAGGACCTCTCTGGGTAG........................................................... 22 0 2 0.50 1 1 0
.............................................................................................AACCAGGACCTCTCTGGGTAGAT......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ATCCGGGACCTCTCTGGGTAG........................................................... 21 1 2 0.50 1 1 0
.............................................................................................ATCCAGGGCCTCTCTGGGTAGAC......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGAA............................................................ 20 1 2 0.50 1 1 0
...........................................................ACTCAGAGTGGGACTGGAAT.............................................................................................. 20 1 2 0.50 1 0 1
..........................................................TACTCAGAGCGGGACTGGAATGA............................................................................................ 23 1 2 0.50 1 0 1
.............................................................................................ATGCAGGACCTCTCTGGGTAG........................................................... 21 1 2 0.50 1 1 0
..........................................................TACTCAGAGCGGGACTGGAATGTCTCC........................................................................................ 27 3 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTCTCTGGGTAAAT......................................................... 23 2 2 0.50 1 1 0
............................................................CTCAGAGCGGGACTGGAAT.............................................................................................. 19 0 2 0.50 1 0 1
..........................................................TACTCAGAGCGGGCCTGGAAT.............................................................................................. 21 1 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTCTTTGGGTAG........................................................... 21 1 2 0.50 1 1 0
.............................................................................................ATCCAGGCCCTCTCTGGGTAGAA......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCCCTGGGTAG........................................................... 21 1 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTTGGTAGA.......................................................... 22 1 2 0.50 1 1 0
......................................................GAGATACTCAGAGCGGGACTGGAAT.............................................................................................. 25 3 2 0.50 1 0 1
..........................................................TACTCAGCGCGGGACTGGAAT.............................................................................................. 21 1 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTCTCTGGGTACAT......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ATCCAGGCCCTCTCTGGGTAGAC......................................................... 23 2 2 0.50 1 1 0
.........................................................................................AATAATCCAGGACCTCTCTGGGTA............................................................ 24 3 2 0.50 1 0 1
..................................................CAGCGTACTACTCAGAGCGGGACTGGAAT.............................................................................................. 29 3 2 0.50 1 0 1
.............................................................................................ATCCAGGACCGCTCTGGGTAG........................................................... 21 1 2 0.50 1 1 0
.............................................................................................ATCAAGGACCTCTCTGGGTAGAT......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ATCCAGAACCTCTCTGGGTAG........................................................... 21 1 2 0.50 1 1 0
.............................................................................................ATCCAGGACCGCTCTGGGTAGAT......................................................... 23 2 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTGCGTAT........................................................... 21 2 2 0.50 1 1 0
.............................................................................................ATCCAGGAACTCTCTGGGTA............................................................ 20 1 2 0.50 1 0 1
.............................................................................................ATCCAGGACCTCTCTGGGTAGG.......................................................... 22 1 2 0.50 1 1 0
.............................................................................................ATCCATGACCTCTCTGGGTA............................................................ 20 1 2 0.50 1 1 0
.............................................................................................ATCCAGGACCTCTCTGCGTAA........................................................... 21 2 2 0.50 1 1 0
...........................................................ACTCAGAGCGGGACTGGA................................................................................................ 18 0 2 0.50 1 0 1
.............................................................................................ATCCAGGACTTCTCTGGGTA............................................................ 20 1 2 0.50 1 1 0
..............................................................................................TCCAGGACCTCTCTGGG.............................................................. 17 0 5 0.40 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTGT........................................................... 21 2 5 0.40 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGCT............................................................. 19 1 5 0.40 2 2 0
.............................................................................................ATCCAGGACCTCTCTGGGTAGACAC....................................................... 25 3 3 0.33 1 0 1
.............................................................................................ATCCAGGACATCTCTGGGTAGAT......................................................... 23 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTCTCGGGGTAGT.......................................................... 22 2 3 0.33 1 1 0
.........................................................ATACTCAGAGTGGGACTGGAAT.............................................................................................. 22 2 3 0.33 1 0 1
.............................................................................................AACCAGGACCTCTCTGGGTA............................................................ 20 1 3 0.33 1 1 0
...............................................................................................CCAGGACCTCTCTGGGTAGCT......................................................... 21 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTCTCTGTGTAGAT......................................................... 23 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACTTCTCTGGGT............................................................. 19 1 6 0.33 2 2 0
.............................................................................................ATCCAGGACATCTCTGGGTAG........................................................... 21 1 3 0.33 1 1 0
.............................................................................................ATCCAGGACCCCTCTGGGT............................................................. 19 1 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTCTCTCGGTAGT.......................................................... 22 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACGTCTCTGGGTAGAT......................................................... 23 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACCCCTCTGGGTAT........................................................... 21 2 3 0.33 1 1 0
..............................................................................................TCCAGGACCTCTCTGGGTAGAA......................................................... 22 1 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTTTCTGGGTAGA.......................................................... 22 1 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTTTCTGGGT............................................................. 19 1 6 0.33 2 2 0
.............................................................................................ATCCAGGAACTCTCTGGGTAGAT......................................................... 23 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTCTCTGAGTA............................................................ 20 1 3 0.33 1 0 1
.............................................................................................ATCCAGGACCTCTCTGGGTGGAT......................................................... 23 2 3 0.33 1 1 0
.............................................................................................ATCCAGGACATCTCTGGGTAGT.......................................................... 22 2 3 0.33 1 1 0
............................................................CTCAGAGCGGGTCTGGAAT.............................................................................................. 19 1 3 0.33 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGATAGT.......................................................... 22 2 3 0.33 1 1 0
.............................................................................................ATCCCGGACCTCTCTGGG.............................................................. 18 1 3 0.33 1 1 0
..............................................................................................TCCAGGACCTTTCTGGGTAG........................................................... 20 1 4 0.25 1 1 0
..............................................................................................TCCAGGAGCTCTCTGGGTAGAT......................................................... 22 2 4 0.25 1 1 0
.............................................................................................ATCCAGTACCTCTCTGGGTAGT.......................................................... 22 2 4 0.25 1 1 0
.............................................................................................ATCCAGGAGCTCTCTGGGTAG........................................................... 21 1 4 0.25 1 1 0
................................................................................................CAGGACCTCTCTGGGTAGT.......................................................... 19 1 4 0.25 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGGAGAC......................................................... 23 2 4 0.25 1 1 0
...............................................................AGAGCGGGACTGGAAT.............................................................................................. 16 0 4 0.25 1 0 1
...............................................................................................CCAGGATCTCTCTGGGTAG........................................................... 19 1 4 0.25 1 1 0
.............................................................................................ATCAAGGACCTCTCTGGGTAT........................................................... 21 2 4 0.25 1 1 0
..........................................................TACTCAGAGTGGGACTGGA................................................................................................ 19 1 4 0.25 1 0 1
.............................................................................................ATCCAGGACCTCTCCGGGTAT........................................................... 21 2 4 0.25 1 1 0
.............................................................................................ATCCAGGACCTCTGTGGGTA............................................................ 20 1 4 0.25 1 0 1
.............................................................................................GTCCAGGACCTCTCTGGGTAGT.......................................................... 22 2 4 0.25 1 1 0
..............................................................................................TCCAGGACCTCTCTGGGCAG........................................................... 20 1 4 0.25 1 1 0
.............................................................................................ATCCAGGCCCTCTCTGGGTA............................................................ 20 1 4 0.25 1 1 0
.............................................................................................ATCCAGGTCCTCTCTGGGTAGAT......................................................... 23 2 4 0.25 1 1 0
.............................................................................................ATCCAGGACCTCTCAGGGTAG........................................................... 21 1 4 0.25 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGTAAGT......................................................... 23 3 5 0.20 1 1 0
.........................................................ATACTCAGAGCGGGACTG.................................................................................................. 18 1 5 0.20 1 0 1
.............................................................................................ATCCCGGACCTCTCTGGGTAAT.......................................................... 22 3 5 0.20 1 1 0
..............................................................................................TCCAGGACCTCTCTGGGCAGAT......................................................... 22 2 5 0.20 1 1 0
.............................................................................................ATCCAGCACCTCTCTGGGT............................................................. 19 1 5 0.20 1 1 0
.............................................................................................ATCCAGGGCCTCTCTGGGTAT........................................................... 21 2 5 0.20 1 1 0
.............................................................................................ATCCAGTACCTCTCTGGGT............................................................. 19 1 5 0.20 1 0 1
.............................................................................................ATCCAGGACCTCTCTGGGCAC........................................................... 21 2 6 0.17 1 1 0
.............................................................................................ATCGAGGACCTCTCTGGGT............................................................. 19 1 6 0.17 1 1 0
.............................................................................................TTCCAGGACCTCTCTGGGTA............................................................ 20 1 6 0.17 1 0 1
..............................................................................................TCCAGGACCTTTCTGGGTAGT.......................................................... 21 2 7 0.14 1 1 0
.............................................................................................ATGCAGGACCTCTCTGGGCAG........................................................... 21 2 7 0.14 1 1 0
.............................................................................................ATCAAGGACCTCTCTGGGT............................................................. 19 1 7 0.14 1 1 0
.............................................................................................ATCCAGGACCTTTCTGGGTAT........................................................... 21 2 7 0.14 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGGAT........................................................... 21 2 7 0.14 1 1 0
...............................................................................................CCAGGACCTCTCTGGG.............................................................. 16 0 9 0.11 1 0 1
.............................................................................................ATCCAGGACCTTGCTGGGTAGAT......................................................... 23 3 9 0.11 1 1 0
.............................................................................................ATCAAGGACCTCTCTGGG.............................................................. 18 1 9 0.11 1 1 0
...............................................................................................CCAGGACCTCTCTGGGCAG........................................................... 19 1 9 0.11 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGTGC........................................................... 21 2 11 0.09 1 1 0
.............................................................................................ATCCAGGACCTCTCTGGGTTT........................................................... 21 2 13 0.08 1 1 0
.............................................................................................ATCCAGGACCCCTCTGGGAAGT.......................................................... 22 3 20 0.05 1 1 0

Anti-sense strand reads

TCCCCTACCACCTCGGACTACCCGGTCGTCGAACTGTAAGCACTACACACGTCACGGGATGAGTCTCGCCCTGACCTTACACTTGGAGACTCGTAGGTCCTGGAGAGACCCATCTCGTTCCGAGTGGTTCATGTAGTAGTGACCACTGGAGACATGACCACCACCCTCACGTT
********************************************..(((.((..(((.((((((((((.((..(((((.(((..........))))))))..)).)))))))))).)))..)).)))...******************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:26 AM