ID:

ocu-mir-99a

 Coordinate:

chr14:144547517-144547581 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.3 -45.1 -45.0

Sense Strand Reads

ACAACAAATTCGACATTAATAGGGAGCCTATGCGAGATGTTGCCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTGGTAATCTGACAAAATACAATACACAATGCTGCTCAATAAAAT
***************************************(((((((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).)))))))))).))))).************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
......................................................AACCCGTAGATCCGATCTTGT.......................................................................................... 21 0 1 3070.00 3070 1818 1252
......................................................AACCCGTAGATCCGATCTTGTGT........................................................................................ 23 1 1 1027.00 1027 1022 5
......................................................AACCCGTAGATCCGATCTTGTG......................................................................................... 22 0 1 646.00 646 551 95
......................................................AACCCGTAGATCCGATCTTG........................................................................................... 20 0 1 509.00 509 155 354
......................................................AACCCGTAGATCCGATCTT............................................................................................ 19 0 1 281.00 281 66 215
.......................................................ACCCGTAGATCCGATCTTGT.......................................................................................... 20 0 1 107.00 107 82 25
......................................................AACCCGTAGATCCGATCTTGTGA........................................................................................ 23 1 1 103.00 103 84 19
...........................................................................................CAAGCTCGCTTCTATGGGTCTG.................................................... 22 0 1 95.00 95 95 0
.........................................................CCGTAGATCCGATCTTGTGT........................................................................................ 20 1 1 65.00 65 65 0
...........................................................................................CAAGCTCGCTTCTATGGGTCTGT................................................... 23 0 1 54.00 54 54 0
.........................................................CCGTAGATCCGATCTTGT.......................................................................................... 18 0 1 51.00 51 51 0
......................................................AACCCGTAGATCCGATCTTGTGAT....................................................................................... 24 1 1 40.00 40 39 1
..........................................................CGTAGATCCGATCTTGT.......................................................................................... 17 0 1 34.00 34 31 3
.....................................................AAACCCGTAGATCCGATCTTGT.......................................................................................... 22 0 1 32.00 32 25 7
......................................................AACCCGTAGATCCGATCT............................................................................................. 18 0 1 23.00 23 11 12
......................................................AACCCGTAGATCCGATCTTGTGTT....................................................................................... 24 1 1 23.00 23 23 0
......................................................GACCCGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 21.00 21 21 0
.....................................................AAACCCGTAGATCCGATCTT............................................................................................ 20 0 1 21.00 21 7 14
.......................................................ACCCGTAGATCCGATCTTG........................................................................................... 19 0 1 20.00 20 6 14
.......................................................ACCCGTAGATCCGATCTTGTG......................................................................................... 21 0 1 19.00 19 16 3
.......................................................ACCCGTAGATCCGATCTT............................................................................................ 18 0 1 18.00 18 5 13
......................................................AACCCGTAGATCCGATCTTGTGAA....................................................................................... 24 2 1 17.00 17 17 0
.....................................................AAACCCGTAGATCCGATCTTG........................................................................................... 21 0 1 15.00 15 6 9
........................................................CCCGTAGATCCGATCTTGTGT........................................................................................ 21 1 1 11.00 11 11 0
............................................................................................AAGCTCGCTTCTATGGGTCTGT................................................... 22 0 1 11.00 11 11 0
......................................................AACCCGTAGATCCGATCTTGG.......................................................................................... 21 1 1 10.00 10 4 6
..........................................................CGTAGATCCGATCTTGTG......................................................................................... 18 0 1 10.00 10 10 0
......................................................AACCCGCAGATCCGATCTTGT.......................................................................................... 21 1 1 10.00 10 2 8
...........................................................................................CAAGCTCGCTTCTATGGGT....................................................... 19 0 1 10.00 10 10 0
.......................................................ACCCGTAGATCCGATCTTGTGT........................................................................................ 22 1 1 10.00 10 10 0
...........................................................................................CAAGCTCGCTTCTATGGGTCT..................................................... 21 0 1 9.00 9 7 2
......................................................GACCCGTAGATCCGATCTTGT.......................................................................................... 21 1 1 8.00 8 5 3
......................................................AACCCGTCGATCCGATCTTGT.......................................................................................... 21 1 1 8.00 8 5 3
......................................................AACCCGTAGATCAGATCTTGTGT........................................................................................ 23 2 1 7.00 7 7 0
.....................................................AAACCCGTAGATCCGATCTTGTG......................................................................................... 23 0 1 7.00 7 6 1
......................................................AACCCGGAGATCCGATCTTGT.......................................................................................... 21 1 1 7.00 7 5 2
..........................................................CGTAGATCCGATCTTGTGT........................................................................................ 19 1 1 7.00 7 7 0
...........................................................GTAGATCCGATCTTGT.......................................................................................... 16 0 1 7.00 7 5 2
......................................................GACCCGTAGATCCGATCTTGTG......................................................................................... 22 1 1 7.00 7 3 4
......................................................AACCCGTAGATCCGATCTTGTT......................................................................................... 22 1 1 6.00 6 6 0
......................................................AACCCGAAGATCCGATCTTGT.......................................................................................... 21 1 1 6.00 6 3 3
......................................................AACCCGTAGATCCGATCTTGTGTTT...................................................................................... 25 2 1 6.00 6 6 0
......................................................AACCCGTATATCCGATCTTGT.......................................................................................... 21 1 1 6.00 6 6 0
......................................................AACCCGTAGATCCGATCTTGTGG........................................................................................ 23 0 1 6.00 6 6 0
......................................................AACCCGTAGATCCGATCTTGTGTA....................................................................................... 24 2 1 5.00 5 5 0
......................................................AACCCGGAGATCCGATCTTGTG......................................................................................... 22 1 1 5.00 5 4 1
...........................................................................................CAAGCTCGCTTCTATGGGTCTGAT.................................................. 24 2 1 5.00 5 5 0
......................................................AACCCGTAGATCCGATTTTGT.......................................................................................... 21 1 1 5.00 5 5 0
...........................................................GTAGATCCGATCTTGTGT........................................................................................ 18 1 1 5.00 5 5 0
......................................................AACCCGTAGATCCGATTTTGTGA........................................................................................ 23 2 1 5.00 5 5 0
......................................................AACCCGTAGATCCGAT............................................................................................... 16 0 1 5.00 5 5 0
......................................................TACCCGTAGATCCGATCTTGT.......................................................................................... 21 1 1 5.00 5 0 5
...........................................................................................CAAGCTCGCTTCTATGGGTCTGTT.................................................. 24 1 1 4.00 4 4 0
......................................................AACCCGAAGATCCGATCTTGTGT........................................................................................ 23 2 1 4.00 4 4 0
......................................................AACCCGTAGATCCGATC.............................................................................................. 17 0 1 4.00 4 1 3
......................................................AACCCGTAGCTCCGATCTTGT.......................................................................................... 21 1 1 4.00 4 3 1
..........................................................................................ACAAGCTCGCTTCTATGGGTCTG.................................................... 23 0 1 4.00 4 4 0
.........................................................CCGTAGATCCGATCTTGTT......................................................................................... 19 1 1 4.00 4 4 0
......................................................AACCCGTAGGTCCGATCTTGT.......................................................................................... 21 1 1 4.00 4 3 1
......................................................AACCCGTAGATCTGATCTTGT.......................................................................................... 21 1 1 3.00 3 1 2
......................................................AACCCGTAGCTCCGATCTTG........................................................................................... 20 1 1 3.00 3 0 3
......................................................GACCCGTAGATCCGATCTTG........................................................................................... 20 1 1 3.00 3 0 3
.......................................................ACCCGTAGATCCGATCTTGTGA........................................................................................ 22 1 1 3.00 3 1 2
......................................................TACCCGTAGATCCGATCTTG........................................................................................... 20 1 1 3.00 3 0 3
...........................................................................................CAGGCTCGCTTCTATGGGTCTGT................................................... 23 1 1 3.00 3 3 0
.........................................................CCGTAGATCCGATCTTG........................................................................................... 17 0 1 3.00 3 3 0
......................................................AACCCGCAGATCCGATCTTGTG......................................................................................... 22 1 1 3.00 3 3 0
...........................................................................................CAAGCTCGCTTCTATGGGTC...................................................... 20 0 1 3.00 3 2 1
......................................................AACCCGTAGCTCCGATCTTGTGT........................................................................................ 23 2 1 3.00 3 3 0
.............................................................................................AGCTCGCTTCTATGGGTCTGT................................................... 21 0 1 3.00 3 3 0
......................................................AACCCGTAGTTCCGATCTTGT.......................................................................................... 21 1 1 3.00 3 1 2
......................................................AACCCTTAGATCCGATCTTGT.......................................................................................... 21 1 1 3.00 3 3 0
......................................................AACCCATAGATCCGATCTTGT.......................................................................................... 21 1 1 3.00 3 2 1
......................................................CACCCGTAGAACCGACCTTG........................................................................................... 20 3 20 2.65 53 35 18
.......................................................ACCCGTAGAACCGACCTTG........................................................................................... 19 2 2 2.50 5 5 0
.........................................................CCGTAGATCCGATCTTGTG......................................................................................... 19 0 1 2.00 2 2 0
......................................................AACCAGTAGATCCGATCTTGT.......................................................................................... 21 1 1 2.00 2 1 1
......................................................AACCCGTAGATCCGATCTTGGG......................................................................................... 22 1 1 2.00 2 2 0
........................................................................................CCCCAAGCTCGCTTCTATGGGTCTGA................................................... 26 3 1 2.00 2 2 0
......................................................AACCCGTAGTTCCGATCTTGTG......................................................................................... 22 1 1 2.00 2 1 1
......................................................AACCCGTAGATCCGATCTTGTGC........................................................................................ 23 1 1 2.00 2 2 0
......................................................AACCCGTAGATCCGATCTTGTGTTG...................................................................................... 25 1 1 2.00 2 0 2
............................................................TAGATCCGATCTTGT.......................................................................................... 15 0 1 2.00 2 0 2
......................................................AACCCGTAGTTCCGATCTTGTGT........................................................................................ 23 2 1 2.00 2 2 0
...................................................AAAAACCCGTAGATCCGATCTTGT.......................................................................................... 24 1 1 2.00 2 2 0
..........................................................................................ACAAGCTCGCTTCTATGGGTCTGT................................................... 24 0 1 2.00 2 2 0
......................................................AACCCGTTGATCCGATCTTGT.......................................................................................... 21 1 1 2.00 2 1 1
......................................................AACCCGTAGATCCGATCTTGTTGG....................................................................................... 24 2 1 2.00 2 0 2
......................................................AACCCGTAGATCCGATCTTGC.......................................................................................... 21 1 1 2.00 2 2 0
......................................................AACCCGTGGATCCGATCTTGT.......................................................................................... 21 1 1 2.00 2 2 0
........................................................CCCGTAGATCCGATCTTG........................................................................................... 18 0 1 2.00 2 2 0
....................................................AAAACCCGTAGATCCGAT............................................................................................... 18 1 1 2.00 2 2 0
......................................................AACCCGTAGATCCGATTTTGTGT........................................................................................ 23 2 1 2.00 2 2 0
......................................................AACCCGAAGATCCGATCTTG........................................................................................... 20 1 1 2.00 2 0 2
......................................................AACCCGTAGATCCGATCTTGAT......................................................................................... 22 2 1 2.00 2 2 0
......................................................AACCCGTAGATCCGATCTTGTTT........................................................................................ 23 2 1 2.00 2 2 0
......................................................AACCCGTCGATCCGATCTTGTGT........................................................................................ 23 2 1 2.00 2 2 0
...................................................AGTAACCCGTAGATCCGATCTTG........................................................................................... 23 2 1 2.00 2 0 2
.........................................................CCGTAGATCCGATCTTGTGA........................................................................................ 20 1 1 2.00 2 2 0
......................................................AACCCGTAGATCCGTTCTTGT.......................................................................................... 21 1 1 2.00 2 1 1
........................................................CCCGTAGATCCGATCTTGT.......................................................................................... 19 0 1 2.00 2 2 0
......................................................AACCCGTAGATCCGATCTTGTA......................................................................................... 22 1 1 2.00 2 2 0
......................................................AACCCGTCGATCCGATCTTGTG......................................................................................... 22 1 1 2.00 2 2 0
......................................................AACCCGTAGATCCGATCTTGTGTTC...................................................................................... 25 2 1 2.00 2 0 2
......................................................AACCCCTAGATCCGATCTTGT.......................................................................................... 21 1 1 2.00 2 2 0
..................................................GGAAAACCCGTAGATCCGATCTTGT.......................................................................................... 25 3 1 1.00 1 0 1
.........................................................CAGTAGATCCGATCTTGT.......................................................................................... 18 1 1 1.00 1 1 0
.....................................................AAACCCGTAGATCCGATCTTCT.......................................................................................... 22 1 1 1.00 1 1 0
......................................................AACCCGGAGATCCGATCTT............................................................................................ 19 1 1 1.00 1 0 1
.......................................................ACCCGTAGCTCCGATCTTGTGT........................................................................................ 22 2 1 1.00 1 1 0
.....................................................GAACCCGTAGATCCGATCTTGT.......................................................................................... 22 1 1 1.00 1 1 0
.....................................................GAACCCGTAGATCCGATCTTGTG......................................................................................... 23 1 1 1.00 1 1 0
...........................................................................................CAAGCTCGCTTCTATGGG........................................................ 18 0 1 1.00 1 1 0
......................................................AACCCCTAGATCCGATCTTGTT......................................................................................... 22 2 1 1.00 1 1 0
...........................................................................................CAAGCTCGCTTCTATATGTCTG.................................................... 22 2 1 1.00 1 1 0
......................................................AACCCGTAGGTCCGATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
...........................................................................................CAAGCTCGCTTCTATGGGTCTGA................................................... 23 1 1 1.00 1 1 0
......................................................AACCCGTAGAACCGATCTTGT.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTGTGTAG...................................................................................... 25 2 1 1.00 1 0 1
......................................................AACCCGTCGATCCGATCTT............................................................................................ 19 1 1 1.00 1 0 1
......................................................AACTCGTAGATCCGATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
...........................................................................................CAAGCTCGCTTCTATGGGTCTGAC.................................................. 24 2 1 1.00 1 1 0
......................................................TACCCGTAGATCCGATCTT............................................................................................ 19 1 1 1.00 1 0 1
.......................................................ACCCGTAGATCCGATCCTG........................................................................................... 19 1 1 1.00 1 0 1
......................................................GACCCGTGGATCCGATCTTGT.......................................................................................... 21 2 1 1.00 1 0 1
......................................................AACCCGTAGATCTGATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
......................................................AACCCGTAGATTCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................CACCCGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTCGT.......................................................................................... 21 1 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATCTTGA.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AACTCGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCCGGTCTTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATCTTGCGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTGGGTCCGATCTTGT.......................................................................................... 21 2 1 1.00 1 0 1
.......................................................ACCCGTAGAACCGACCTTGCG......................................................................................... 21 3 2 1.00 2 2 0
......................................................AACCCATAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCAGATCTTG........................................................................................... 20 1 1 1.00 1 1 0
.................................................GCTCCAACCCGTAGATCCGATCTTG........................................................................................... 25 3 1 1.00 1 0 1
......................................................GACCCGTAGATCCGATCTTGTTGG....................................................................................... 24 3 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATCTTGTGAC....................................................................................... 24 2 1 1.00 1 0 1
................................................GGCCGTAACCCGTAGATCCGATCTT............................................................................................ 25 3 1 1.00 1 0 1
.............................................................AGATCCGATCTTGTG......................................................................................... 15 0 1 1.00 1 1 0
......................................................AACTCGTAGATCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 0 1
.................................................GGGAAAACCCGTAGATCCGATCTTG........................................................................................... 25 3 1 1.00 1 0 1
......................................................AACCCGTATATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCTGATCTT............................................................................................ 19 1 1 1.00 1 1 0
......................................................AACCCGTACATCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................AACCTGTAGATCCGATCT............................................................................................. 18 1 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTGTTG........................................................................................ 23 1 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATATTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................AACCCGTAAATCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AACCCGTAGATGCGATCTTGT.......................................................................................... 21 1 1 1.00 1 1 0
.......................................................ACCCATAGATCCGATCTTGT.......................................................................................... 20 1 1 1.00 1 1 0
......................................................AACCCGTAGATCCGGTCTTGT.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AACCCGTAGATCCGACCTTGT.......................................................................................... 21 1 2 1.00 2 1 1
......................................................AACGCGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTGTGTG....................................................................................... 24 2 1 1.00 1 0 1
......................................................AACCAGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................GACCCGTAGATCCGATCTT............................................................................................ 19 1 1 1.00 1 0 1
..........................................................................................ACAAGCTCGCTTCTATGGGTCT..................................................... 22 0 1 1.00 1 1 0
...........................................................................................AAAGCTCGCTTCTATGGGTCT..................................................... 21 1 1 1.00 1 1 0
.....................................................AAACCCGCAGATCCGATCTTGT.......................................................................................... 22 1 1 1.00 1 0 1
......................................................AACCCGTTGATCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................AACCCGGAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
...........................................................................................GAAGCTCGCTTCTATGGGTCTGT................................................... 23 1 1 1.00 1 1 0
......................................................AACCCGGAGATCCGATCTTGTGTT....................................................................................... 24 2 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTGTCAG....................................................................................... 24 3 1 1.00 1 0 1
......................................................AACCCCTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACACGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
....................................................AAAACCCGTGGATCCGATCTT............................................................................................ 21 2 1 1.00 1 0 1
............................................................................................AAGCTCGCTTCTATGGGTCT..................................................... 20 0 1 1.00 1 1 0
......................................................AACCCGTAGATCCTATCTTGTGAT....................................................................................... 24 2 1 1.00 1 1 0
......................................................AACCCGAAGATCCGATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
......................................................AACCCGTTGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
.....................................................AAACCCGTAGATCCGATCTTGTGT........................................................................................ 24 1 1 1.00 1 1 0
......................................................GACCCGTAGATCCGATCTTGTGA........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTGTC......................................................................................... 22 1 1 1.00 1 0 1
.......................................................ACCCGTAGATCCGATCTTGTGTGG...................................................................................... 24 2 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATCTTGTCGG....................................................................................... 24 2 1 1.00 1 0 1
.....................................................AAACCCGTAGATCCGATCTTGTGGTGAAGTGGAC.............................................................................. 34 0 1 1.00 1 1 0
......................................................AACCCGTAGACCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 0 1
....................................................GAAACCCGTAGATCCGATCTTGT.......................................................................................... 23 1 1 1.00 1 0 1
.....................................................AAACCCGTAGATCCGATCTTGTA......................................................................................... 23 1 1 1.00 1 1 0
......................................................AACCCGTAGATCCAATCTTGTGA........................................................................................ 23 2 1 1.00 1 0 1
.......................................................ACCCGAAGATCCGATCTTGTGA........................................................................................ 22 2 1 1.00 1 0 1
.....................................................AAACCCGCAGATCCGATCTTGTG......................................................................................... 23 1 1 1.00 1 1 0
......................................................ACCCCGTAGATCCGATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
......................................................AAGCCGTAGATCCGATCTT............................................................................................ 19 1 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATATTGT.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AACCCGTCGATCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
.....................................................AGACCCGTAGATCCGATCTTG........................................................................................... 21 1 1 1.00 1 0 1
......................................................AGCCCGTAGATCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 0 1
......................................................AACCTGTAGATCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 0 1
......................................................AACCCGTAGCTCCGATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
.......................................................ACCCGTAGATCTGATCTTGTG......................................................................................... 21 1 1 1.00 1 1 0
......................................................AATCCGTAGATCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 0 1
......................................................AACCCGTAGATCCAATCTTGTG......................................................................................... 22 1 1 1.00 1 1 0
.........................................................CCGTCGATCCGATCTTGTGT........................................................................................ 20 2 1 1.00 1 1 0
......................................................AACCCGCAGATCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
.........................................................CCGCAGATCCGATCTTGT.......................................................................................... 18 1 1 1.00 1 1 0
......................................................CACCCGTAGATCCGATCTTGT.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AACCCGTTGATCCGATCTTGTG......................................................................................... 22 1 1 1.00 1 0 1
......................................................AACCCGTGGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
............................................................................................AAGCTCGTTTCTATGGGTCTGT................................................... 22 1 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTGTTAC....................................................................................... 24 3 1 1.00 1 0 1
......................................................AACCCATAGATCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
........................................................CCCGTAGATCCGATCTTGTG......................................................................................... 20 0 1 1.00 1 1 0
.....................................................AGACCCGTAGATCCGATCTTGTG......................................................................................... 23 1 1 1.00 1 1 0
......................................................AACCCGTAGACCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................AACCCGTAGATCCGATCCTG........................................................................................... 20 1 1 1.00 1 0 1
...........................................................................................CAGACTCGATTCTATGGGTCTGT................................................... 23 3 1 1.00 1 1 0
......................................................AACCCGTAGATCCGATCTTCT.......................................................................................... 21 1 1 1.00 1 1 0
......................................................AAACCGTAGATCCGATCTT............................................................................................ 19 1 1 1.00 1 0 1
............................................................TAGATCCGATCTTGTGA........................................................................................ 17 1 1 1.00 1 0 1
......................................................AACCCGTAGATCTGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCAGATCTTGTGA........................................................................................ 23 2 1 1.00 1 1 0
......................................................AACCCGTAGATCCGCTCTTG........................................................................................... 20 1 1 1.00 1 0 1
.....................................................ACACCCGTAGATCCGATCTT............................................................................................ 20 1 1 1.00 1 0 1
......................................................AACCCGGAGATCCGATCTTG........................................................................................... 20 1 1 1.00 1 0 1
......................................................ACCCCGTAGATCCGATCTTGTGT........................................................................................ 23 2 1 1.00 1 1 0
..........................................................AGTAGATCCGATCTTGT.......................................................................................... 17 1 2 0.50 1 0 1
..........................................................CGTAGATTCGATCTTGT.......................................................................................... 17 1 2 0.50 1 1 0
......................................................AACCCGTAGATCCGA................................................................................................ 15 0 2 0.50 1 1 0
......................................................GACCCTTAGATCCGATCTTGTG......................................................................................... 22 2 2 0.50 1 0 1
......................................................AGCCCGTGGATCCGTTCTTGTG......................................................................................... 22 3 2 0.50 1 1 0
......................................................AACCCGTAGATCCGAGCTT............................................................................................ 19 1 2 0.50 1 0 1
.....................................................ACACCCGTAGAACCGACCTTG........................................................................................... 21 3 6 0.33 2 2 0
......................................................AACCCGTAGAACCGACCTTGC.......................................................................................... 21 3 4 0.25 1 1 0
.......................................................ACCCGTAGAACCGACCTT............................................................................................ 18 2 4 0.25 1 0 1
.........................................................CCGTAGATCCGATCTTGAA......................................................................................... 19 2 4 0.25 1 1 0
.............................................................AGATCCGATCTTGTGT........................................................................................ 16 1 9 0.22 2 2 0
..............................................................GATCCGATCTTGTGT........................................................................................ 15 1 20 0.15 3 3 0
.........................................................CCGTAGAACCGACCTTGCG......................................................................................... 19 3 20 0.10 2 2 0

Anti-sense strand reads

TGTTGTTTAAGCTGTAATTATCCCTCGGATACGCTCTACAACGGGTAACCGTATTTGGGCATCTAGGCTAGAACACCACTTCACCTGGCGTGTTCGAGCGAAGATACCCAGACACAGTCACACCATTAGACTGTTTTATGTTATGTGTTACGACGAGTTATTTTA
*************************************(((((((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).)))))))))).))))).*************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:34 AM