ID:

ocu-mir-873a

 Coordinate:

chr1:24466631-24466707 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.9 -34.8 -34.8 -34.7

Sense Strand Reads

TCTATTCAATTGAAGTGAAGGAAATATCACCATCTGCTTAAAATAAGTTTGTGTGCATTTGCAGGAACTTGTGAGTCTCCTATTGAAAATGAACAGGAGACTGATGAGTTCCCGGGAACACCCACAAATCTTCCTGCTCACTCTGCTGCTTTGCAATGGACAACATTCTATGACTGG
***********************************..........((((((((....(((...(((((((((.((((((((.((.......)).)))))))).)))))))))...)))....))))))............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
............................................................GCAGGAACTTGTGAGTCTCCTA............................................................................................... 22 0 1 16.00 16 16
............................................................GCAGGAACTTGTGAGTCTCCTAT.............................................................................................. 23 0 1 7.00 7 7
............................................................GCAGGAACTTGTGAGTCTCCT................................................................................................ 21 0 1 5.00 5 5
...............................................................................................GGAGACTGATGAGTTCCCGGGT............................................................ 22 1 1 3.00 3 3
.............................................................CAGGAACTTGTGAGTCTCCTA............................................................................................... 21 0 1 3.00 3 3
............................................................GCAGGAACTTGTGAGT..................................................................................................... 16 0 1 2.00 2 2
...............................................................................................GGAGACTGATGAGTTCCCGGGAT........................................................... 23 1 1 2.00 2 2
................................................................................................GAGACTGATGAGTTCCCTGGA............................................................ 21 1 2 1.50 3 3
............................................................GCAGGAACTTGGGAGTCTCCTG............................................................................................... 22 2 4 0.25 1 1

Anti-sense strand reads

AGATAAGTTAACTTCACTTCCTTTATAGTGGTAGACGAATTTTATTCAAACACACGTAAACGTCCTTGAACACTCAGAGGATAACTTTTACTTGTCCTCTGACTACTCAAGGGCCCTTGTGGGTGTTTAGAAGGACGAGTGAGACGACGAAACGTTACCTGTTGTAAGATACTGACC
***********************************..........((((((((....(((...(((((((((.((((((((.((.......)).)))))))).)))))))))...)))....))))))............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:26 AM