ID:

ocu-mir-7650

 Coordinate:

chr1:123186152-123186212 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TATGTTTTTGTCTAATTTGGACAAAGACTGACATAGAGGTGCAAAAAATAAATCCTCTTTTGCAACCCAGAACTCATGGCTCAGTATGAGTTTTGATACATACAAGCAGGAACAGATGCCTAACATGGTTAAACGTGATGGGTGGAGTATTTGTAGCTATA
***********************************...(((...........((((((.........(((((((((((......))))))))))).........)).))))............)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
..............................................................................................GATACATACAAGCAGGAACAG.............................................. 21 0 1 2.00 2 0 2
................................................................ACCCAGAACTCATTGCTCAGTATGAGTTTTGAT................................................................ 33 1 7 0.86 6 6 0
.......................................................................ACTCATTGCTCAGTATGAGTT..................................................................... 21 1 12 0.50 6 6 0
...............................................................AACCCAGAACTCATTGCTCAGTATGAGTTTTGAT................................................................ 34 1 7 0.29 2 2 0
..................GGACAAAGACTGACATA.............................................................................................................................. 17 0 4 0.25 1 1 0
.....................................................................................................ACAAGCAGGAACAGAT............................................ 16 0 5 0.20 1 1 0
..................................................................CCAGAACTCATTGCTCAGTATGAGTTTTGATA............................................................... 32 1 8 0.13 1 1 0
......................................................................................................CAAGCAGGAACAGAT............................................ 15 0 11 0.09 1 1 0

Anti-sense strand reads

ATACAAAAACAGATTAAACCTGTTTCTGACTGTATCTCCACGTTTTTTATTTAGGAGAAAACGTTGGGTCTTGAGTACCGAGTCATACTCAAAACTATGTATGTTCGTCCTTGTCTACGGATTGTACCAATTTGCACTACCCACCTCATAAACATCGATAT
***********************************...(((...........((((((.........(((((((((((......))))))))))).........)).))))............)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP
.......AACAGATTAAACCTG........................................................................................................................................... 15 0 6 0.17 1 1

Generated: 05/16/2015 at 12:27 AM