ID:

ocu-mir-7233

 Coordinate:

chr8:29623719-29623762 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-21.6 -21.5 -21.2

Sense Strand Reads

GAGTGGGTTTAGGAGTCGCTGGGCCTCCATGGCTCTTGGTCCGTTCCAGAAGTGGAGACAGACTGCAAGCACCTGCCAACAGGACCCTTGTCAATGCTCTGCAGGGCCGGGAGCACTGAGCCTGCTCTCGGGCCACAGTAGCAA
***********************************..(((((.........((((((.((....(((((..((((....))))...)))))...)))))))).))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGGT........................................................................................................ 31 0 1 49.00 49 49 0
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 29 0 1 40.00 40 0 40
.........TAGGAGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 28 0 1 26.00 26 0 26
...............................................................TGCAAGCACCTGCCGACAGGACCCTTGTC.................................................... 29 1 1 18.00 18 18 0
.............................TGGCTCTTGGTCCGTTCCAGAAGT........................................................................................... 24 0 1 17.00 17 17 0
....................................TGGTCCGTTCCAGAAGTGGAGACAGAC................................................................................. 27 0 1 13.00 13 13 0
.......................................................AGACAGACTGCAAGCACCTGCCGAC................................................................ 25 1 1 12.00 12 12 0
...................................................................................ACCCTTGTCAATGCTCTGCAGGGCCGGT................................. 28 1 1 11.00 11 11 0
........................................CCGTTCCAGAAGTGGAGACAGACT................................................................................ 24 0 1 10.00 10 0 10
........................................................GACAGACTGCAAGCACCTGCCGAC................................................................ 24 1 1 9.00 9 9 0
..................................CTTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 25 0 1 8.00 8 8 0
................................CTCTTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 27 0 1 8.00 8 7 1
.........................................................................TGCCAACAGGACCCTTGTCAATGCTC............................................. 26 0 1 7.00 7 7 0
....................................................TGGAGACAGACTGCAAGCACCTGC.................................................................... 24 0 1 7.00 7 3 4
..........AGGAGTCGCTGGGCCTCCATGGCTCTTGGT........................................................................................................ 30 0 1 7.00 7 7 0
.........................................................................TGCCAACAGGACCCTTGTCAATGCT.............................................. 25 0 1 6.00 6 0 6
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGG......................................................................................................... 30 0 1 6.00 6 4 2
.......................................................AGACAGACTGCAAGCACCTGCCAACAGGAC........................................................... 30 0 1 6.00 6 6 0
........................................CCGTTCCAGAAGTGGAGACAGACTGCAA............................................................................ 28 0 1 6.00 6 0 6
.......................................................AGACAGACTGCAAGCACCTGCCGACAGG............................................................. 28 1 1 5.00 5 5 0
...................................TTGGTCCGTTCCAGAAGTGGAGACAGAC................................................................................. 28 0 1 5.00 5 5 0
...............................................................TGCAAGCACCTGCCGACAGGACCCTTG...................................................... 27 1 1 5.00 5 5 0
.........................................................................TGCCAACAGGACCCTTGTCAATGCTCTGC.......................................... 29 0 1 5.00 5 5 0
..............................GGCTCTTGGTCCGTTCCAGAAG............................................................................................ 22 0 1 4.00 4 4 0
............................................................GACTGCAAGCACCTGCCAACAGGA............................................................ 24 0 1 4.00 4 0 4
...................................TTGGTCCGTTCCAGAAGTGGAGACAGACT................................................................................ 29 0 1 4.00 4 4 0
............................................................GACTGCAAGCACCTGCCAACAGGACC.......................................................... 26 0 1 4.00 4 4 0
.........TAGGAGTCGCTGGGCCTCCATGGCTCT............................................................................................................ 27 0 1 4.00 4 0 4
...................................TTGGTCCGTTCCAGAAGTGGAGACAGACTGA.............................................................................. 31 1 1 4.00 4 4 0
....................................TGGTCCGTTCCAGAAGTGGAGACAGACT................................................................................ 28 0 1 4.00 4 4 0
............................................................GACTGCAAGCACCTGCCGACAGGAC........................................................... 25 1 1 4.00 4 4 0
.........................................................................TGCCAACAGGACCCTTGTCAATGC............................................... 24 0 1 4.00 4 0 4
............................................................GACTGCAAGCACCTGCCGACAGGA............................................................ 24 1 1 4.00 4 0 4
................................CTCTTGGTCCGTTCCAGAAGTGGAGA...................................................................................... 26 0 1 4.00 4 4 0
...........................................TTCCAGAAGTGGAGACAGACT................................................................................ 21 0 1 4.00 4 4 0
...................................................................................ACCCTTGTCAATGCTCTGCAGGG...................................... 23 0 1 4.00 4 4 0
.............................TGGCTCTTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 30 0 1 4.00 4 4 0
.........TAGGAGTCCCTGGGCCTCCATGGCTCTTGGT........................................................................................................ 31 1 1 4.00 4 4 0
...................................TTGGTCCGTTCCAGAAGTGGAGACAGACTGT.............................................................................. 31 1 1 3.00 3 3 0
.............................TGGCTCTTGGTCCGTTCCAGAAGTGGAGT...................................................................................... 29 1 1 3.00 3 3 0
....................................................TGGAGACAGACTGCAAGCACCTGCC................................................................... 25 0 1 3.00 3 1 2
......................................................GAGACAGACTGCAAGCACCTGCCGAC................................................................ 26 1 1 3.00 3 3 0
...............................................................TGCAAGCACCTGCCGACAGGACCC......................................................... 24 1 1 3.00 3 2 1
...................................................................................ACCCTTGTCAATGCTCTGCAGGGCC.................................... 25 0 1 3.00 3 1 2
.........................................................ACAGACTGCAAGCACCTGCCAACAGGAC........................................................... 28 0 1 3.00 3 0 3
......................................GTCCGTTCCAGAAGTGGAGACAGACTGCATT........................................................................... 31 2 1 3.00 3 3 0
.......................................TCCGTTCCAGAAGTGGAGACAGACTGCAA............................................................................ 29 0 1 3.00 3 0 3
...................................................................................ACCCTTGTCAATGCTCTGCAGGGCCGGGT................................ 29 1 1 3.00 3 3 0
...................................................GTGGAGACAGACTGCAAGCACCTGCC................................................................... 26 0 1 3.00 3 2 1
...................................................GTGGAGACAGACTGCAAGCACCTG..................................................................... 24 0 1 3.00 3 0 3
......................................GTCCGTTCCAGAAGTGGAGACAGACTGCAAT........................................................................... 31 1 1 3.00 3 3 0
...................................................GTGGAGACAGACTGCAAGCACCTGC.................................................................... 25 0 1 3.00 3 3 0
.................................................................................GGACCCTTGTCAATGCTCTGCAGGGCC.................................... 27 0 1 3.00 3 3 0
...........................................TTCCAGAAGTGGAGACAGACTGC.............................................................................. 23 0 1 3.00 3 0 3
..........................................................CAGACTGCAAGCACCTGCCAACAGGAC........................................................... 27 0 1 3.00 3 1 2
...................................................................................ACCCTTGTCAATGCTCTGCAGGGCCT................................... 26 1 1 3.00 3 3 0
.......................................................AGACAGACTGCAAGCACCTGCCGA................................................................. 24 1 1 3.00 3 1 2
...........................................................AGACTGCAAGCACCTGCCAACAGG............................................................. 24 0 1 3.00 3 0 3
.........................................................ACAGACTGCAAGCACCTGCCGACAGGAC........................................................... 28 1 1 3.00 3 2 1
.........................................................ACAGACTGCAAGCACCTGCCG.................................................................. 21 1 1 2.00 2 0 2
........................................................GACAGACTGCAAGCACCTGCCAACAGGAC........................................................... 29 0 1 2.00 2 2 0
.................................TCTTGGTCCGTTCCAGAAGTGGAGACA.................................................................................... 27 0 1 2.00 2 0 2
..................................................................................GACCCTTGTCAATGCTCTGCAGGGCCGGGT................................ 30 1 1 2.00 2 2 0
.................................TCTTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 26 0 1 2.00 2 0 2
.............................................................................................ATGCTCTGCAGGGCCGGGT................................ 19 1 1 2.00 2 2 0
.........................................................................TGCCAACAGGACCCTTGTCAATG................................................ 23 0 1 2.00 2 0 2
...........................................................AGACTGCAAGCACCTGCCAACAGGA............................................................ 25 0 1 2.00 2 0 2
.......................................TCCGTTCCAGAAGTGGAGACAGACTGCAAGT.......................................................................... 31 1 1 2.00 2 2 0
...............................................................TGCAAGCACCTGCCGACAGGACCCTT....................................................... 26 1 1 2.00 2 0 2
..........................................................CAGACTGCAAGCACCTGCCAACAGGA............................................................ 26 0 1 2.00 2 0 2
.......................................................AGACAGACTGCAAGCACCTGCCG.................................................................. 23 1 1 2.00 2 0 2
......................................GTCCGTTCCAGAAGTGGAGACAGACTGCAT............................................................................ 30 1 1 2.00 2 2 0
...........GGAGTCGCTGGGCCTCCATGGCTCTTGGT........................................................................................................ 29 0 1 2.00 2 2 0
......................................................GAGACAGACTGCAAGCACCTGCCGACAGG............................................................. 29 1 1 2.00 2 2 0
...........................................TTCCAGAAGTGGAGACAGACTGCAAGC.......................................................................... 27 0 1 2.00 2 0 2
............................................................................................AATGCTCTGCAGGGCCGGGA................................ 20 0 1 2.00 2 2 0
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGGTC....................................................................................................... 32 0 1 2.00 2 2 0
.............................................................ACTGCAAGCACCTGCCGACAGGAC........................................................... 24 1 1 2.00 2 0 2
.............................................................ACTGCAAGCACCTGCCGACAGGA............................................................ 23 1 1 2.00 2 0 2
...................................................................................ACCCTTGTCAATGCTCTGCAGGGCCGGGC................................ 29 1 1 2.00 2 2 0
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTA.......................................................................................................... 29 1 1 2.00 2 2 0
........ATAGGAGTCGCTGGGCCTCCATGGCTCTTGG......................................................................................................... 31 1 1 2.00 2 2 0
........ATAGGAGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 29 1 1 2.00 2 0 2
....................................TGGTCCGTTCCAGAAGTGGAGACAGACTGC.............................................................................. 30 0 1 2.00 2 2 0
.........................................................................TGCCAACAGGACCCTTGTCAATGCTCTGCAT........................................ 31 1 1 2.00 2 2 0
..................................................AGTGGAGACAGACTGCAAGCACCTGCCGTT................................................................ 30 3 1 2.00 2 2 0
...............................................................TGCAAGCACCTGCCAACAGGACCCTTGTCTT.................................................. 31 2 1 2.00 2 2 0
...............................................................TGCAAGCACCTGCCAACAGGACCC......................................................... 24 0 1 2.00 2 1 1
...................................................................................ACCCTTGTCAATGCTCTGCAGGGCCA................................... 26 1 1 2.00 2 0 2
......................................GTCCGTTCCAGAAGTGGAGACAGAC................................................................................. 25 0 1 2.00 2 2 0
...........................................................AGACTGCAAGCACCTGCCAACAGGACC.......................................................... 27 0 1 2.00 2 2 0
......................................................GAGACAGACTGCAAGCACCTGCCGACAGGAC........................................................... 31 1 1 2.00 2 2 0
......................................................GAGACAGACTGCAAGCACCTGCCAAC................................................................ 26 0 1 2.00 2 2 0
..........AGGAGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 28 0 1 2.00 2 0 2
..............GTCCCTGGGCCTCCATGGCTCTTGGT........................................................................................................ 26 1 1 2.00 2 2 0
........................................................................ATGCCAACAGGACCCTTGTCAATGCT.............................................. 26 1 1 2.00 2 0 2
...............................................................TGCAAGCACCTGCCGACAGGACCCTTGT..................................................... 28 1 1 2.00 2 2 0
...........GGAGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 26 0 1 2.00 2 0 2
.........................................................................TGCCGACAGGACCCTTGTCAATGCTCTGCAT........................................ 31 2 1 2.00 2 1 1
.............................TGGCTCTTGGTCCGTTCCAGAAGTGGA........................................................................................ 27 0 1 2.00 2 0 2
..............................................CAGAAGTGGAGACAGACTGCAAGC.......................................................................... 24 0 1 1.00 1 0 1
......................................GTCCGTTCCAGAAGTGGAGACAGA.................................................................................. 24 0 1 1.00 1 1 0
...........GGAGTCGCTGGGCCTCCCTGGCTCTTGG......................................................................................................... 28 1 1 1.00 1 0 1
...............TCGCTGGGCCTCCATGGCTCTTGGTGT...................................................................................................... 27 2 1 1.00 1 1 0
.........................................................ACAGACTGCAAGCACCTGCCAACAGGA............................................................ 27 0 1 1.00 1 0 1
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTAT......................................................................................................... 30 2 1 1.00 1 1 0
...........................................................AGACTGCAAGCACCTGCCGACAGGAC........................................................... 26 1 1 1.00 1 0 1
..........................................................CAGACTGCAAGCACCTGCCGAC................................................................ 22 1 1 1.00 1 1 0
.......................................TCCGTTCCAGAAGTGGAGACAGACTGC.............................................................................. 27 0 1 1.00 1 0 1
..............................................CAGAAGTGGAGACAGACTGCAAGCACTCGT.................................................................... 30 3 1 1.00 1 0 1
................................CTCTTGGTCCGTTCCAGAAGTTGAGAC..................................................................................... 27 1 1 1.00 1 1 0
...................................TTGGTCCGTTCCAGAAGTGGAGACA.................................................................................... 25 0 1 1.00 1 0 1
........................................................................ATGCCGACAGGACCCTTGTCAATGC............................................... 25 2 1 1.00 1 0 1
.............................................................ACTGCAAGCACCTGCCGACAGGACC.......................................................... 25 1 1 1.00 1 1 0
.......................................TCCGTTCCAGAAGTGGAGACAGACT................................................................................ 25 0 1 1.00 1 0 1
...........................................................AGACTGCAAGCACCTGCCAACAGGACCCTT....................................................... 30 0 1 1.00 1 0 1
....................................................TGGAGACAGACTGCAAGCACCTGCCA.................................................................. 26 0 1 1.00 1 0 1
............................................................GACTGCAAGCACCTGCCGACAGG............................................................. 23 1 1 1.00 1 0 1
...........................................................AGACTGCAAGCACCTGCCGACAGGA............................................................ 25 1 1 1.00 1 0 1
...TGGGTTTAGGAGTCGCTGGGCCTCCAT.................................................................................................................. 27 0 1 1.00 1 0 1
.............................GGGCTCTTGGTCCGTTCCAGAAGT........................................................................................... 24 1 1 1.00 1 1 0
......................................................GAGACAGACTGCAAGCACCTGCCAA................................................................. 25 0 1 1.00 1 1 0
.......................................................AGACAGACTGCAAGCACCTGCCAACAGG............................................................. 28 0 1 1.00 1 0 1
....................................................................................................................TGAGCCTGCTCTCGGGCCACAGTAGAT. 27 2 1 1.00 1 1 0
.............................TGGCTCTTGGTCCGTTCCAGAAGTGT......................................................................................... 26 1 1 1.00 1 1 0
..........AGGAGTCGCTGGGCCTCCATGGCTCTTGGTC....................................................................................................... 31 0 1 1.00 1 1 0
...............................................................GGCAAGCACCTGCCGACAGGACCCTTG...................................................... 27 2 1 1.00 1 1 0
...............................................................TGCAAGCACCTGCCAACAGGACCCTTGTCAATCG............................................... 34 2 1 1.00 1 0 1
..........................................................CAGACTGCAAGCACCTGCCAACAG.............................................................. 24 0 1 1.00 1 0 1
...................................TTGGTCCGTTCCAGAAGTTGAGAC..................................................................................... 24 1 1 1.00 1 1 0
...............................................................TGCAAGCACCTGCCGACAGGACCCT........................................................ 25 1 1 1.00 1 0 1
.......AATAGGAGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 31 2 1 1.00 1 0 1
.......................................................AGACAGACTGCAAGCACCTGCCAACAGAAC........................................................... 30 1 1 1.00 1 1 0
............................................TCCAGAAGTCGAGACAGACTGCA............................................................................. 23 1 1 1.00 1 0 1
...............................................................TGCAAGCACCTGCCGACAGGACC.......................................................... 23 1 1 1.00 1 1 0
.........TAGGAGTCGCTGGGCCTCCATGGCT.............................................................................................................. 25 0 1 1.00 1 0 1
............................................................GACTGCCAGCACCTGCCGACAGGA............................................................ 24 2 1 1.00 1 0 1
..........................................................................GCCAACAGGACCCTTGTCAATGCTTCGTA......................................... 29 3 1 1.00 1 0 1
............................................................................CAACAGGACCCTTGTCAATGCTCT............................................ 24 0 1 1.00 1 0 1
................................................................GCAAGCACCTGCCGACAGGACCCTTGTCTT.................................................. 30 3 1 1.00 1 1 0
.......................................ACCGTTCCAGAAGTGGAGACAGACTGCAA............................................................................ 29 1 1 1.00 1 0 1
..............................GGCTCTTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 29 0 1 1.00 1 1 0
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGGA........................................................................................................ 31 1 1 1.00 1 1 0
.........................................................ACAGACTGCAAGCACCTGCCAACAGG............................................................. 26 0 1 1.00 1 0 1
......................................GTCCGTTCCAGAAGTGGAGACAGACTGT.............................................................................. 28 1 1 1.00 1 1 0
.......................................................................................TTGTCAATGCTCTGCAGGGCCGGGA................................ 25 0 1 1.00 1 0 1
...........................................TTCCAGAAGTGGAGACAGACTGCAA............................................................................ 25 0 1 1.00 1 0 1
............................................TCCAGAAGTGGAGACAGACTGCAA............................................................................ 24 0 1 1.00 1 1 0
....AGGAATAGGAGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 33 3 1 1.00 1 0 1
...............................................................GGCAAGCACCTGCCGACAGGACCC......................................................... 24 2 1 1.00 1 1 0
.........................................................ACAGACTGCAAGCACCTGCCGACAG.............................................................. 25 1 1 1.00 1 0 1
...........................................................................CCAACAGGACCCTTGTCAATGCTCTGCA......................................... 28 0 1 1.00 1 0 1
.......................................................AGACAGACTGCAAGCACCTGCCGAT................................................................ 25 2 1 1.00 1 1 0
................................CTCTTGGTCCGTTCCAGAAGGGGAGA...................................................................................... 26 1 1 1.00 1 1 0
...............................................................TGCAAGCACCTGCCAACAGGACCCTTGTCT................................................... 30 1 1 1.00 1 1 0
...........................................TTCCAGACGTGGAGACAGACT................................................................................ 21 1 1 1.00 1 1 0
.....................................................................................CCTTGTCAATGCTCTGCAGGGCCAGGAT............................... 28 2 1 1.00 1 1 0
...........................................TTCCAGAAGTGGAGACAGACTCCAA............................................................................ 25 1 1 1.00 1 0 1
...........................................TTCCAGAAGTGGAGACAGACTGCAAGCA......................................................................... 28 0 1 1.00 1 0 1
......GAATAGGAGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 32 2 1 1.00 1 0 1
...................................................GTGGAGACAGACTGCAAGCACCTGCCG.................................................................. 27 1 1 1.00 1 0 1
.........TAGGAGTCGCTGGGCCTCCATGGCTC............................................................................................................. 26 0 1 1.00 1 0 1
.............AGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 25 0 1 1.00 1 0 1
.........................................................ACAGACTGCAAGCACCTGCCGACAGGA............................................................ 27 1 1 1.00 1 0 1
.........................................................................TGCCGACAGGACCCTTGTCAATGCTCTGTT......................................... 30 3 1 1.00 1 0 1
..........................................................TAGACTGCAAGCACCTGCCAACAGGACC.......................................................... 28 1 1 1.00 1 0 1
..........................................................CAGACTGCAAGCACCTGCCGACAGGAC........................................................... 27 1 1 1.00 1 1 0
..........................................................CAGACTGCAAGCACCTGCCAACAGGACC.......................................................... 28 0 1 1.00 1 0 1
...............................................................GGCAAGCACCTGCCGACAGGACCCTTGT..................................................... 28 2 1 1.00 1 1 0
.......................................................AGACAGACTGCAAGCACCTGCCGACAGGAC........................................................... 30 1 1 1.00 1 1 0
........................................CCGTTCCAGAAGTGGAGACAGACTGC.............................................................................. 26 0 1 1.00 1 0 1
............................................TCCAGAAGTGGAGACAGACTGC.............................................................................. 22 0 1 1.00 1 0 1
.......................................................AGACAGACTGCAAGCACCTGCCA.................................................................. 23 0 1 1.00 1 0 1
....................................TGGTCCGTTCCAGAAGTGGAGACAGACTGT.............................................................................. 30 1 1 1.00 1 1 0
................CGCTGGGCCTCCATGGCTCTTGGT........................................................................................................ 24 0 1 1.00 1 1 0
..........AGGAGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 27 0 1 1.00 1 0 1
...........GGAGTCGCTGGGCATCCATGGCTCTTGGT........................................................................................................ 29 1 1 1.00 1 1 0
.................................TCTTGGACCGTTCCAGAAGTGGAGACAGA.................................................................................. 29 1 1 1.00 1 1 0
....................................................TGGAGACAGACTGCAAGCACCTGCCAT................................................................. 27 1 1 1.00 1 1 0
...................................................GTGGAGACAGACTGCAAGCACCTGCCGA................................................................. 28 1 1 1.00 1 0 1
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGTTT....................................................................................................... 32 2 1 1.00 1 1 0
....................................................................................CCCTTGTCAATGCTCTGCAGGGCCAGGTGT.............................. 30 3 1 1.00 1 1 0
....GCGGATAGGAGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 34 3 1 1.00 1 0 1
..............................GGCTCTTGGTCCGTTCCAGAAGT........................................................................................... 23 0 1 1.00 1 0 1
............................................................GACTGCAAGCACCTGCCAACAGG............................................................. 23 0 1 1.00 1 0 1
...........................................................GGAATGCAAGCACCTGCCGACAGGAC........................................................... 26 3 1 1.00 1 0 1
........................................CCGTTCCAGAAGTGGAGACAGACTGCAAGCT......................................................................... 31 1 1 1.00 1 0 1
...................................TTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 24 0 1 1.00 1 0 1
.........................................AGTTCCAGAAGTGGAGACAGACTG............................................................................... 24 1 1 1.00 1 0 1
........ATAGGAGTCGCTGGGCCTCCATGGCTCTTG.......................................................................................................... 30 1 1 1.00 1 0 1
....................................TGGTCCGTTCCAGAAGTGGAGACA.................................................................................... 24 0 1 1.00 1 0 1
..........................................................CAGACTGCAAGCACCTGCCGCCAGGACT.......................................................... 28 3 1 1.00 1 1 0
...................................TTGGTCCGTTCCAGAAGTGGAGACAGA.................................................................................. 27 0 1 1.00 1 1 0
..............................................................ATGCAAGCACCTGCCGACAGGACCCT........................................................ 26 2 1 1.00 1 1 0
....................................TGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 23 0 1 1.00 1 1 0
...TCGGAATAGGAGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 34 3 1 1.00 1 0 1
......................................GTCCGTTCCAGAAGTGGAGACAGACTGCAA............................................................................ 30 0 1 1.00 1 1 0
...............................GCTCTTGGTCCGTTCCAGAAGTGGAGAC..................................................................................... 28 0 1 1.00 1 0 1
.........................................................................TGCCAACAGGACCCTTGTCAATGCTCTG........................................... 28 0 1 1.00 1 0 1
........GTAGGAGTCCCTGGGCCTCCATGGCTCT............................................................................................................ 28 2 1 1.00 1 1 0
....................................................................................ACCTTGTCAATGCTCTGCAGGGCCA................................... 25 2 1 1.00 1 0 1
....................................GGGTCCGTTCCAGAAGTGGAGACAGAC................................................................................. 27 1 1 1.00 1 1 0
..............GTCGCTGGGCCTCCATGGCTCTTT.......................................................................................................... 24 1 1 1.00 1 1 0
.........................................................................TGCCGACAGGACCCTTGTCAATGCTATGCAT........................................ 31 3 1 1.00 1 1 0
..........................................................CAGACTGCAAGCACCTGCCAACAGG............................................................. 25 0 1 1.00 1 0 1
..............................................................ATGCAAGCACCTGCCGACAGGACCCTTTT..................................................... 29 3 1 1.00 1 0 1
......................................ATCCGTTCCAGAAGTGGAGACAGACTGCAA............................................................................ 30 1 1 1.00 1 0 1
...............................................................TGCAAGCACCTGCCAACAGGACCCT........................................................ 25 0 1 1.00 1 0 1
..........................................ATTCCAGAAGTGGAGACAGACTGCAAGCA......................................................................... 29 1 1 1.00 1 0 1
................................CTCTTGGTCCGTTCCAGAAGTGGAGACA.................................................................................... 28 0 1 1.00 1 0 1
......................................................GAGACAGACTGCAAGCACCTGCCGA................................................................. 25 1 1 1.00 1 0 1
............................................................................CAACAGGACCCTTGTCAATGCTCTG........................................... 25 0 1 1.00 1 0 1
.........................................................................TGCCAACAGGACCCTTGTCAATGCTCT............................................ 27 0 1 1.00 1 1 0
...................................TTGGTCCGTTCCAGAAGTGGAGACAGACTAA.............................................................................. 31 2 1 1.00 1 1 0
.............AGTCGCTGGGCCTCCATGGCTCTT........................................................................................................... 24 0 1 1.00 1 0 1
.......................................................................................TTGTCAATGCTCTGCAGGGCCGG.................................. 23 0 1 1.00 1 0 1
.....................................GGTCCGTTCCAGAAGTGGAGACAGAC................................................................................. 26 0 1 1.00 1 1 0
.........................................................................TGCCAACAGGACCCTTGTCAATGCTCTGCAG........................................ 31 0 1 1.00 1 1 0
..............................................................CTGCAAGCACCTGCCAACAGGA............................................................ 22 0 1 1.00 1 0 1
.............................TGGCTCTTGGTCCGTTCCAGAAGTG.......................................................................................... 25 0 1 1.00 1 1 0
...........................................TTCCAGAAGTGGAGACAGACTGCAAG........................................................................... 26 0 1 1.00 1 0 1
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGA......................................................................................................... 30 1 1 1.00 1 1 0
....................................TGGCCCGTTCCAGAAGTGGAGACAGACTGC.............................................................................. 30 1 1 1.00 1 1 0
................................................................................AGGACCCTTGTCAATGCTCTGCAG........................................ 24 0 1 1.00 1 0 1
.........TAGGAGTCGCTGGGCCTCCATGGCTCTTGTT........................................................................................................ 31 1 1 1.00 1 1 0
.................................TCTTGGTCCGTTCCAGAAGTGGAGACAGACGC............................................................................... 32 2 1 1.00 1 0 1
.............AGTCGCTGGGCCTCCATGGCTCTTGGTC....................................................................................................... 28 0 1 1.00 1 1 0
.............................TGGCTCTTGGTCCGTTCCAGAAGTGA......................................................................................... 26 1 1 1.00 1 1 0
....................................................................................CCCTTGTCAATGCTCTGCAGGGCCAGGAGT.............................. 30 2 1 1.00 1 1 0
..............................................................................................TGCTCTGCAGGGCCAGGAGCACTGAGT....................... 27 2 2 0.50 1 1 0
.............................................................................................ATGCTCTGCAGGGCCGGT................................. 18 1 4 0.25 1 1 0
............................................................................CGACAGGACCCTTGTCA................................................... 17 1 9 0.11 1 1 0

Anti-sense strand reads

CTCACCCAAATCCTCAGCGACCCGGAGGTACCGAGAACCAGGCAAGGTCTTCACCTCTGTCTGACGTTCGTGGACGGTTGTCCTGGGAACAGTTACGAGACGTCCCGGCCCTCGTGACTCGGACGAGAGCCCGGTGTCATCGTT
***********************************..(((((.........((((((.((....(((((..((((....))))...)))))...)))))))).))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:49 AM