ID:

ocu-mir-7031

Coordinate:

chr21:7497133-7497168 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CACACAGCAGGCGCCTGTGCAGGCCTGGGTGGACAGAGTGCCTGCCACCAGGGACCCGTCTTGAGTGCCCCTTCTTGGTCTCCTAGAGCTCAAAGCCCAAACTGCAAGCAGCCTGCTCCAGCATCCAGGAGGTCCG
***********************************...............((.....((.((((((......(((.((...)).))))))))).))))...***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP
........................................................................................ATCAAAGCCCAAACTGCAAGCAGCCTGC.................... 28 1 1 1.00 1 1

Anti-sense strand reads

GTGTGTCGTCCGCGGACACGTCCGGACCCACCTGTCTCACGGACGGTGGTCCCTGGGCAGAACTCACGGGGAAGAACCAGAGGATCTCGAGTTTCGGGTTTGACGTTCGTCGGACGAGGTCGTAGGTCCTCCAGGC
***********************************...............((.....((.((((((......(((.((...)).))))))))).))))...***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
GSM1528821
Adult_testes_Mili_IP
......................................................................................TCGAGTTTCGGGTTTGACGTTCGT.......................... 24 0 1 4.00 4 4 0
.TGTGTCGTCCGCGGACACGTCCGG............................................................................................................... 24 0 1 2.00 2 2 0
.............................................................................CAGAGGATCTCGAGTTTCGGGT..................................... 22 0 1 2.00 2 2 0
.......................................................................................CGAGTTTCGGGTTTGACGTTCGT.......................... 23 0 1 2.00 2 2 0
.......................................................................AAGAACCAGAGGATCTCGAGTTTCGGG...................................... 27 0 1 1.00 1 0 1
.TGTGTCGTCCGCGGACACGTCCG................................................................................................................ 23 0 1 1.00 1 1 0
.......................................................................AAGAACCAGAGGATCTCGAGT............................................ 21 0 1 1.00 1 1 0
...............................................................................GAGGATCTCGAGTTTCGGGTT.................................... 21 0 1 1.00 1 0 1
.......................................................................AAGAACCAGAGGATCTCGAGTTTCGGGT..................................... 28 0 1 1.00 1 0 1
.................................................................................GGATCTCGAGTTTCGGGTTTGACGT.............................. 25 0 1 1.00 1 0 1
.................................................................................................................ACGAGGTCGTAGGTCCACC.... 19 1 4 0.25 1 1 0

Generated: 05/16/2015 at 12:42 AM