ID:

ocu-mir-7018

 Coordinate:

chr13:131463521-131463639 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-73.9 -73.9 -73.6 -73.6
mature
  1. chr1:15766054-15766068 +
  2. chr1:76416433-76416447 +
  3. chr1:141221361-141221375 +
  4. chr1:194201561-194201575 +
  5. chr12:114861157-114861171 +
  6. chr13:124512040-124512054 -
  7. chr13:131463570-131463584 +
  8. chr14:6301713-6301727 +
  9. chr14:36068413-36068427 +
  10. chr19:23790064-23790078 +
  11. chr2:144115700-144115714 +
  12. chr20:31167000-31167014 +
  13. chr4:5949792-5949806 -
  14. chr7:49442751-49442765 -
  15. chr9:22631381-22631395 -
  16. chrX:55014936-55014950 +
  17. chrUn0031:874317-874331 +
  18. chrUn0098:818459-818473 +
  19. chrUn0112:941002-941016 +
  20. chrUn0297:290487-290501 -
star

Sense Strand Reads

GCGTGCGCCCCGGGGCCGACGTCACCTTCATCTGCACTGCCAAAAGCAAGGTGGGCGGGGCAGGGGTGGAGCCCAGGCAGTGAGGCAGGCGGGGCAGGGGTGGAGCCAGGCAGCATCCCTGTCCGGGAGCCTCCCCGGTGAGCTCCTCCCCATTCCCTCTGCCCTGCAGTCCCCAGCCTACACGCTGGTGTGGACCCGCCTGCACAACGGCAAGCTGCC
***********************************..((......((..((...((((((((((((.(((((.((......(((((.....(((((((((((..((...))..)))))))))))....))))).....)).))))).))))........))))))))...))...)).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
...................................................................................................GTGGAGCCAGGCAGC......................................................................................................... 15 0 20 0.10 2 2

Anti-sense strand reads

CGCACGCGGGGCCCCGGCTGCAGTGGAAGTAGACGTGACGGTTTTCGTTCCACCCGCCCCGTCCCCACCTCGGGTCCGTCACTCCGTCCGCCCCGTCCCCACCTCGGTCCGTCGTAGGGACAGGCCCTCGGAGGGGCCACTCGAGGAGGGGTAAGGGAGACGGGACGTCAGGGGTCGGATGTGCGACCACACCTGGGCGGACGTGTTGCCGTTCGACGG
***********************************..((......((..((...((((((((((((.(((((.((......(((((.....(((((((((((..((...))..)))))))))))....))))).....)).))))).))))........))))))))...))...)).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:33 AM