ID:

ocu-mir-672

Coordinate:

chrUn0059:1030773-1030871 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.2 -42.6
mature
star
  1. chr4:63239849-63239866 +
  2. chrUn0059:1030834-1030851 +

Sense Strand Reads

GCAGCTGGAATGGGCTAGAAGACTTTTTGGTGGTTTAAATATCTTACAAGATGGTGATCTAGCCCTTTAGTTTTGAGGTTGGTGTACTGTGTGTGAGTATACATATTTATCACACACAGTCACTATCTTCGAAAGTGAGGGTGCACATCTTTCTCAGCCATCTCTTTCTTGTAAAGCTGTTGAGGTAAATGTCAGGGTC
**********************************************************...((((((((.((((((((.(((((.(((((((((((.............)))))))))))))))).)))))))).)))))).))*******************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP
GSM1528820
Adult_testes
.........................................................................TGAGGTTGGTGTACTGTGTGTGA....................................................................................................... 23 0 1 5.00 5 2 3
.........................................................................TGAGGTTGGTGTACTGTGTGT......................................................................................................... 21 0 1 5.00 5 4 1
.........................................................................TGAGGTTGGTGTACTGTGTGTG........................................................................................................ 22 0 1 1.00 1 1 0
...............................................................................................................ACACACAGTCACTATCTT...................................................................... 18 0 2 0.50 1 1 0
.........................................................................TGAGGTTGGTGTACTGTGTGG......................................................................................................... 21 1 5 0.20 1 1 0

Anti-sense strand reads

CGTCGACCTTACCCGATCTTCTGAAAAACCACCAAATTTATAGAATGTTCTACCACTAGATCGGGAAATCAAAACTCCAACCACATGACACACACTCATATGTATAAATAGTGTGTGTCAGTGATAGAAGCTTTCACTCCCACGTGTAGAAAGAGTCGGTAGAGAAAGAACATTTCGACAACTCCATTTACAGTCCCAG
*******************************************************...((((((((.((((((((.(((((.(((((((((((.............)))))))))))))))).)))))))).)))))).))**********************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:54 AM