ID:

ocu-mir-6516

 Coordinate:

chrUn0378:61041-61123 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.4 -43.4 -43.1

Sense Strand Reads

GCGCCCCGTACCAGGCAGCCCGACCCTGACCTACAGTAAGCGCCCAGGGGCCGCCCCCCGGTGCGGACGTTGCAGTAACAGGTGTGAGCACCCTAGCAGCAGTTTGGTGATCATGTATGATACTGCACACAGGCCGCGCGCGGGGCCCGCGCAGGGTGGTCGCGAAGTCGTTTCCCGCGTCAG
******************************************************.(((((((((((..(((((((((.((..(((((.((((..(((....))).)))).)))))..)).))))))).))...)))))).)))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP		 GSM1528820
Adult_testes
.....................................................................................................GTTTGGTGATCATGTATGATACTGCACACAGG.................................................. 32 0 1 3.00 3 0 3
.....................................................................TTGCAGTAACAGGTGTGAGCAC............................................................................................ 22 0 1 2.00 2 0 2
.....................................................................TTGCAGTAACAGGTGTGAGCACC........................................................................................... 23 0 1 2.00 2 0 2
....................................................................ATTGCAGTAACAGGTGTGAGCACC........................................................................................... 24 1 1 2.00 2 0 2
.............................................................................................................ATCATGTATGATACTGCACACAA................................................... 23 1 1 2.00 2 2 0
.............................................................................................................ATCATGTATGATACTGCACA...................................................... 20 0 1 2.00 2 2 0
....................................................................ATTGCAGTAACAGGTGTGAGC.............................................................................................. 21 1 1 1.00 1 1 0
................................................................................................................ATGTATGATACTGCACACAG................................................... 20 0 1 1.00 1 1 0
.............................................................................................................ATCATGTATGATACTGCA........................................................ 18 0 1 1.00 1 1 0
.............................................AGGGGCCGCCCCCCGGTGCGGACGTTGCAGTAAC........................................................................................................ 34 0 1 1.00 1 1 0
...........................................................................................................TGATCATGTATGATACTGCACACA.................................................... 24 0 1 1.00 1 1 0
...........................................................................................................TGATCATGTATGATACTGCAC....................................................... 21 0 1 1.00 1 1 0
.................................................................TCTGTTGCAGTAACAGGTGTGAGC.............................................................................................. 24 3 4 0.25 1 0 1
......................................................................................................................................CGCGCGCGGGGCGCGCGC............................... 18 1 20 0.05 1 0 1

Anti-sense strand reads

CGCGGGGCATGGTCCGTCGGGCTGGGACTGGATGTCATTCGCGGGTCCCCGGCGGGGGGCCACGCCTGCAACGTCATTGTCCACACTCGTGGGATCGTCGTCAAACCACTAGTACATACTATGACGTGTGTCCGGCGCGCGCCCCGGGCGCGTCCCACCAGCGCTTCAGCAAAGGGCGCAGTC
***********************************.(((((((((((..(((((((((.((..(((((.((((..(((....))).)))).)))))..)).))))))).))...)))))).)))))...****************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
......................................................................................................................................GAGCGCGCCTCGGGCGCGTC............................. 20 2 9 0.22 2 2

Generated: 05/16/2015 at 12:59 AM