ID:

ocu-mir-540

 Coordinate:

chrUn0352:1861-1919 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CGAGGCCCCCTTGGAGCAGAAGGCCCTGTACCTCCGTAGGGGCAGTCCCTGAGCCACCCTTTGGGCCTGCTGTGCTGGGCATGAGGGCCGAAGGCGGGCTCAGGGTCTGCCCTGGGGCCAATCTCGCTGAGCAGTTGGGGCTGCGCTCCCACAGGGCGC
***********************************...(((((((.(((((((((..(((((((.(((..(((.....)))..))).)))))))..))))))))).)))))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
.............................................TCCCTGAGCCACCCTTTGGGCCT........................................................................................... 23 0 1 3.00 3 3
.............................................TCCCTGAGCCACCCTTTGGG.............................................................................................. 20 0 1 2.00 2 2
.............................................TCCCTGAGCCACCCTTTGGGCCTTTT........................................................................................ 26 2 1 1.00 1 1
.............................................TCCCTGAGCCACCCTTTGGGCCTT.......................................................................................... 24 1 1 1.00 1 1
...................................ATAGGTTCAGTCCCTGAGCCACCCTTTGGGC............................................................................................. 31 3 1 1.00 1 1
............................................ATCCCTGAGCCACCCTTTGGGC............................................................................................. 22 1 1 1.00 1 1
.............................................TCCCTGAGCCACCCTTTGGGA............................................................................................. 21 1 1 1.00 1 1
.......................................................................................CCGATGGCGGGCTCAGGGTC.................................................... 20 1 1 1.00 1 1
.............................................TCCCTGAGCCACCCTTTGGGCCTTT......................................................................................... 25 2 1 1.00 1 1
.............................................TCCCTGAGCCACCCTTTGGGAA............................................................................................ 22 2 4 0.75 3 3
.............................................TCCCTGAGCCACCCTTTGGGAT............................................................................................ 22 2 2 0.50 1 1

Anti-sense strand reads

GCTCCGGGGGAACCTCGTCTTCCGGGACATGGAGGCATCCCCGTCAGGGACTCGGTGGGAAACCCGGACGACACGACCCGTACTCCCGGCTTCCGCCCGAGTCCCAGACGGGACCCCGGTTAGAGCGACTCGTCAACCCCGACGCGAGGGTGTCCCGCG
***********************************...(((((((.(((((((((..(((((((.(((..(((.....)))..))).)))))))..))))))))).)))))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:57 AM