ID:

ocu-mir-5131

Coordinate:

chr17:71939883-71940003 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-75.6	-75.2	-75.2

Sense Strand Reads

CGGCAGCCCTGTTCGGGGATTTGAAAGATTAAAAACTCCCGGTAGAAGAGGGCGGCGGCGTTGGATGTGTGGCGGAAGCGCTGGGGGCCGCGGCCGGGCCGCCGGCGGCGTCTCCACAGCATGAACTACGCGGGCCGCGGCTCCCCGCGGAGCCCCGAGCATAACGGCCGGGGCGGCAGCTCCTGGGAGCTGGGCTCCGACGCGGGGCCGGCGTTCGGCGG *********************************.((((((.....(((.(((((.((((...((((((((.(((.(((((((.((((.......)))).))))).)).)))))))).))).....))))..)))))..))).))).)))((((((.((......))))))))..(((...))).*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
...................................................................................................................................................................ACGGCCGGGGCGGCAG..........................................	16	0	1	2.00	2	2	0
..................................................................................GGGGGCCGCGGCCGGGCCGCCGGCGGCGTCTCCAC........................................................................................................	35	0	1	1.00	1	1	0
...................................................................................................................ACAGCATGAACTACGCG.........................................................................................	17	0	2	1.00	2	2	0
........................................................................................CGCCGCCGGGCCGCCGGCGGC................................................................................................................	21	1	2	0.50	1	1	0
................................................................................................................TCCACAGCATGAACTACGCGGGCCGC...................................................................................	26	0	2	0.50	1	0	1
.......................................................................................CCGCCGCCGGGCCGGCGGCGGC................................................................................................................	22	2	10	0.10	1	1	0

Anti-sense strand reads

GCCGTCGGGACAAGCCCCTAAACTTTCTAATTTTTGAGGGCCATCTTCTCCCGCCGCCGCAACCTACACACCGCCTTCGCGACCCCCGGCGCCGGCCCGGCGGCCGCCGCAGAGGTGTCGTACTTGATGCGCCCGGCGCCGAGGGGCGCCTCGGGGCTCGTATTGCCGGCCCCGCCGTCGAGGACCCTCGACCCGAGGCTGCGCCCCGGCCGCAAGCCGCC *********************************.((((((.....(((.(((((.((((...((((((((.(((.(((((((.((((.......)))).))))).)).)))))))).))).....))))..)))))..))).))).)))((((((.((......))))))))..(((...))).*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes
......................................................................................CGCCGCCGGCCAGGCGGCGGCC.................................................................................................................	22	3	20	0.05	1	1

Generated: 05/16/2015 at 12:37 AM