ID:ocu-mir-497b |
Coordinate:chr19:12026161-12026285 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
CCAGATGTTTTTTGAGTCACTTCTCCAGGGTGGCCTCCCAGGGCCAAGCCTCGGCGGTGCCTCCCCCACCCTCGCTCTAACACCACAGTGTGGTTTGGACGTGGCCACAGTGCCGTACAAACCACAGTGTGCTGCTGGGGCGGGAGCAGGATTCGGGTGGGTTGAGAGGAAGAAGACACAAGGCAGCGCTGTGAAGACCCCCATACCACCAACCTCCAAGAGCAG
***********************************....((.((...(((.........((((.(((((((((((((((.((.((((.(((((((((.....(((......)))...))))))))).)))).)).)))))))))...........))))))....))))............))).)).))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
|
GGTCTACAAAAAACTCAGTGAAGAGGTCCCACCGGAGGGTCCCGGTTCGGAGCCGCCACGGAGGGGGTGGGAGCGAGATTGTGGTGTCACACCAAACCTGCACCGGTGTCACGGCATGTTTGGTGTCACACGACGACCCCGCCCTCGTCCTAAGCCCACCCAACTCTCCTTCTTCTGTGTTCCGTCGCGACACTTCTGGGGGTATGGTGGTTGGAGGTTCTCGTC
***********************************....((.((...(((.........((((.(((((((((((((((.((.((((.(((((((((.....(((......)))...))))))))).)))).)).)))))))))...........))))))....))))............))).)).))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528820 Adult_testes |
GSM1528821 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|
| ....................................................................................................................TGTTTGGTGTCACACGACGAC........................................................................................ | 21 | 0 | 1 | 2367.00 | 2367 | 2352 | 15 |
| ..................................................................................................................TATGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 1 | 1 | 251.00 | 251 | 251 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGACGA......................................................................................... | 20 | 0 | 1 | 209.00 | 209 | 209 | 0 |
| ...................................................................................................................ATGTTTGGTGTCACACGACGAC........................................................................................ | 22 | 0 | 1 | 98.00 | 98 | 96 | 2 |
| ..................................................................................................................CATGTTTGGTGTCACACGACGA......................................................................................... | 22 | 0 | 1 | 65.00 | 65 | 65 | 0 |
| .....................................................................................................................GTTTGGTGTCACACGACGAC........................................................................................ | 20 | 0 | 1 | 43.00 | 43 | 41 | 2 |
| ...................................................................................................................TTGTTTGGTGTCACACGACGAC........................................................................................ | 22 | 1 | 1 | 27.00 | 27 | 27 | 0 |
| ......................................................................................................................TTTGGTGTCACACGACGAC........................................................................................ | 19 | 0 | 1 | 24.00 | 24 | 23 | 1 |
| ..................................................................................................................CATGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 0 | 1 | 24.00 | 24 | 24 | 0 |
| ..................................................................................................................TATGTTTGGTGTCACACGACGA......................................................................................... | 22 | 1 | 1 | 17.00 | 17 | 17 | 0 |
| ..................................................................................................................AATGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 1 | 1 | 9.00 | 9 | 9 | 0 |
| ....................................................................................................................TGTTTGGCGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 8.00 | 8 | 8 | 0 |
| ........................................................................................................................TGGTGTCACACGACGAC........................................................................................ | 17 | 0 | 2 | 7.50 | 15 | 15 | 0 |
| ...................................................................................................................TTGTTTGGTGTCACACGACGA......................................................................................... | 21 | 1 | 1 | 7.00 | 7 | 7 | 0 |
| ...................................................................................................................ATGTTTGGTGTCACACGACGA......................................................................................... | 21 | 0 | 1 | 7.00 | 7 | 5 | 2 |
| ....................................................................................................................TGTTTGGTGTCACACGACGACA....................................................................................... | 22 | 1 | 2 | 5.50 | 11 | 11 | 0 |
| ............................................................................GATTGTGGTGTCACACCAAACC............................................................................................................................... | 22 | 0 | 1 | 5.00 | 5 | 5 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGACG.......................................................................................... | 19 | 0 | 1 | 5.00 | 5 | 5 | 0 |
| ....................................................................................................................TGTTTGGTGTCACAAGACGAC........................................................................................ | 21 | 1 | 1 | 4.00 | 4 | 4 | 0 |
| ......................................................................................................................TTTGGTGTCACACGACGA......................................................................................... | 18 | 0 | 1 | 4.00 | 4 | 4 | 0 |
| ...................................................................................................................ATGTTTGGTGTCACACGACGACA....................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 3 | 1 |
| ...........................................................................AGGTTGTGGTGTCACACCAAAC................................................................................................................................ | 22 | 1 | 1 | 4.00 | 4 | 4 | 0 |
| ..................................................................................................................TATGTTTGGTGTCACACGACGACA....................................................................................... | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGCCGAC........................................................................................ | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| ..................................................................................................................CATGTTTGGTGTCACAC.............................................................................................. | 17 | 0 | 1 | 3.00 | 3 | 3 | 0 |
| ....................................................................................................................TGTTTGGTGTCACCCGACGAC........................................................................................ | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| ....................................................................................................................TGTTTGGTGTTACACGACGAC........................................................................................ | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| ....................................................................................................................AGTTTGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| ..................................................................................................................TATGTTTGGTGTCATACGACGAC........................................................................................ | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 |
| .......................................................................................................................TTGGTGTCACACGACGAC........................................................................................ | 18 | 0 | 2 | 3.00 | 6 | 6 | 0 |
| ..................................................................................................................GATGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| ..................................................................................................................CATGTTTTGTGTCACACGACGAC........................................................................................ | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| ....................................................................................................................TGTTCGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 |
| .............................................................................ATTGTGGTGTCACACCAAAC................................................................................................................................ | 20 | 0 | 1 | 3.00 | 3 | 2 | 1 |
| ....................................................................................................................TGTCTGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACG............................................................................................. | 16 | 0 | 2 | 2.00 | 4 | 4 | 0 |
| ..................................................................................................................AATGTTTGGTGTCACACGACGA......................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ...........................................................................AGATTGTGGTGTCACACCAAAC................................................................................................................................ | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGAAGAC........................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| .................................................................................................................TAATGTTTGGTGTCACACGACGAC........................................................................................ | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 |
| ...................................................................................................................ATGTTTGGTGTCACACGCCGAC........................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTTGTGTCACACGACGAC........................................................................................ | 21 | 1 | 2 | 2.00 | 4 | 4 | 0 |
| .................................................................................................................TGATGTTTGGTGTCACACGACGAC........................................................................................ | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGGTGTCTCACGACGAC........................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGCCGA......................................................................................... | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGGTGTCCCACGACGAC........................................................................................ | 21 | 1 | 2 | 2.00 | 4 | 4 | 0 |
| ....................................................................................................................TGTTTGGGGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGATGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 |
| ...................................................................................................................GTGTTTGGTGTCACACGACGA......................................................................................... | 21 | 1 | 3 | 1.67 | 5 | 5 | 0 |
| .......................................................................................................................TTGGTGTCACACGACGA......................................................................................... | 17 | 0 | 2 | 1.50 | 3 | 3 | 0 |
| ....................................................................................................................CGTTTGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 2 | 1.50 | 3 | 3 | 0 |
| ..................................................................................................................AGTGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 2 | 2 | 1.50 | 3 | 3 | 0 |
| ..................................................................................................................TTTGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 2 | 2 | 1.50 | 3 | 3 | 0 |
| ....................................................................................................................TGTTTGGTGCCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ..........................................................................TTGATTGTGGTGTCACACCAAACC............................................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ...................................................................................................................ATGTTTGGTGTCACACGACG.......................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGTTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGACCAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................GGTTTGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTGGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGACGGC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGCGTCACACGACGACCCC..................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...........................................................................TGATTGTGGTGTCACACCAAACC............................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TCTTTGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGAGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................CGTTTGGTGTCACACGACGA......................................................................................... | 20 | 1 | 2 | 1.00 | 2 | 2 | 0 |
| ...................................................................................................................ATGTTTGATGTCACACGACGAC........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...................................................................................................................ATGTTTGGCGTCACACGACGAC........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...............................................................................TGTGGTGTCACACCAAACCT.............................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 |
| ..................................................................................................................TATGTTTGGCGTCACACGACGAC........................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ...................................................................................................................ATGTTTGGTGTTACACGACGAC........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TATTTGGTGTCACACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................ATTGTTTGGTGTCACACGACGA......................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................TATGTTTGGTGTCACACAACGAC........................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTGTCATACGACGA......................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTGTCACGCGACGA......................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| .............................................................................ATTGTGGTGTCACACCAACC................................................................................................................................ | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTGGGTGTCACACGACGA......................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...................................................................................................................CTGTTTGGTGTCACACGACGAC........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................TATGTTTGGTGTGACACGACGAC........................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................TATGTTTGGTGTCACACGCCGAC........................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................CATGTTTGGAGTCACACGACG.......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................CATGTTTGGTGTCACACGAAGAC........................................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................................CATGTTTGGTGCCACACGACGAC........................................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGCGTCACACGACGA......................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ............................................................................GGTTGTGGTGTCACACCAAACC............................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTGTCAAACGACGAC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...................................................................................................................TTGTTTGGTGTCACACGACGACA....................................................................................... | 23 | 2 | 2 | 1.00 | 2 | 0 | 2 |
| ....................................................................................................................TGTTTGGTGTCACACGACGTC........................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ...................................................................................................................ATGTTTGGTGTCACAC.............................................................................................. | 16 | 0 | 4 | 0.75 | 3 | 3 | 0 |
| ..................................................................................................................TGTGTTTGGTGTCACACGACGAC........................................................................................ | 23 | 2 | 3 | 0.67 | 2 | 2 | 0 |
| ....................................................................................................................TGTTTGGTGTCACTCGACGAC........................................................................................ | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTGTCACACGA............................................................................................ | 17 | 0 | 2 | 0.50 | 1 | 0 | 1 |
| ....................................................................................................................TGTTTGGTCTCACACGACGAC........................................................................................ | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 |
| ....................................................................................................................TGTTCGGTGTCACACGACGA......................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 |
| ..................................................................................................................TATGTTTGGTGTCAAACGACGAC........................................................................................ | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 |
| ....................................................................................................................TGTTTGGTATCACACGACGAC........................................................................................ | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 |
| ..................................................................................................................TATGTTTGGGGTCACACGACGAC........................................................................................ | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 |
| ......................................................................................................................TTTGGTGTCACGCGACGAC........................................................................................ | 19 | 1 | 3 | 0.33 | 1 | 1 | 0 |
| ...........................................................................AGGTTGGGGTGTCACACCAAAC................................................................................................................................ | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 |
| ..................................................................................................................CATGTTTGGTGTCAC................................................................................................ | 15 | 0 | 7 | 0.29 | 2 | 2 | 0 |
| ..................................................................................................................TATGTTTGGTGTCACACG............................................................................................. | 18 | 1 | 9 | 0.22 | 2 | 2 | 0 |
| .......................................................................................................................TTGGTGTCACACGACGACA....................................................................................... | 19 | 1 | 7 | 0.14 | 1 | 1 | 0 |
| .......................................................................................................................TTGGTGTCGCACGACGAC........................................................................................ | 18 | 1 | 9 | 0.11 | 1 | 1 | 0 |
| ..........................................................................................................................GTGTCACACGACGAC........................................................................................ | 15 | 0 | 19 | 0.05 | 1 | 1 | 0 |
Generated: 05/16/2015 at 12:39 AM