ID:

ocu-mir-486b

 Coordinate:

chrUn0008:1523802-1523891 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CTGGGCGCGCAGGCCCCGGGGCCACGGGGCTTCCTCCATTCCCGCTGACTCCCACCCCGATGCATCCTGGACTGAGCCGCCCCGAGCTGGGCGCAGGCAAGGGCCTCAGGGCAGCTCAGTACAGGGTCCCTCAGGGAGGGCGGAGATGGTCAGAGCCGGCTGCGGAGCCTCCTGCCGCCTGTTCACAGGC
***********************************(((((.(((((..(((((.....((...((((((.(((((((.((((.(((((..((....))...)).))).)))).))))))).))))))...)).)))))))))).)))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
..........................................................................................................CGGGGCAGCTCAGTACAGGAT............................................................... 21 2 6 0.17 1 1

Anti-sense strand reads

GACCCGCGCGTCCGGGGCCCCGGTGCCCCGAAGGAGGTAAGGGCGACTGAGGGTGGGGCTACGTAGGACCTGACTCGGCGGGGCTCGACCCGCGTCCGTTCCCGGAGTCCCGTCGAGTCATGTCCCAGGGAGTCCCTCCCGCCTCTACCAGTCTCGGCCGACGCCTCGGAGGACGGCGGACAAGTGTCCG
***********************************(((((.(((((..(((((.....((...((((((.(((((((.((((.(((((..((....))...)).))).)))).))))))).))))))...)).)))))))))).)))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
.........................................................................................................AGTCCCGTCGAGTCATGTCCC................................................................ 21 0 1 1.00 1 0 1
.......................................................................................................TGAGTCCCGTCGAGTCATGTCCC................................................................ 23 1 1 1.00 1 1 0
........................................................................................................GAGTCCCGTCGAGTCATGTCCC................................................................ 22 0 1 1.00 1 1 0
...........................................................................................................CCCCGTCGAGTCATGTCCC................................................................ 19 1 5 0.40 2 2 0
...............................................................TAGGACATGACTCGACGGGGC.......................................................................................................... 21 2 6 0.17 1 1 0

Generated: 05/16/2015 at 12:52 AM