ID:

ocu-mir-486a

 Coordinate:

chrUn0008:1523780-1523911 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-80.9 -80.8 -80.8

Sense Strand Reads

AGCCAGGGCGAGGGTGCATGGTGCCTGTGAACAGGCGGCAGGAGGCTCCGCAGCCGGCTCTGACCATCTCCGCCCTCCCTGAGGGACCCTGTACTGAGCTGCCCTGAGGCCCTTGCCTGCGCCCAGCTCGGGGCGGCTCAGTCCAGGATGCATCGGGGTGGGAGTCAGCGGGAATGGAGGAAGCCCCGTGGCCCCGGGGCCTGCGCGCCCAGCCGATGGTTCCGTTCCAGCC
***********************************.....((.((((.((.....((((((..((((.((((((((((((((.....((((.((((((((((((((((......((....))....)))))))))))))))).)))).....)))))).))).....))))).)))).)).)))).)).))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
......................................................................................CCCTGTACTGAGCTGCCCTGA............................................................................................................................. 21 0 1 1.00 1 0 1
......................................................................................CCCTGTACTGAGCTGCCCTGAGT........................................................................................................................... 23 1 1 1.00 1 1 0
......................................................................................CCCTGTACTGAGCTGCCCTGAG............................................................................................................................ 22 0 1 1.00 1 1 0
......................................................................................CCCTGTACTGAGCTGCCCC............................................................................................................................... 19 1 5 0.40 2 2 0
................................................................................................................................CGGGGCAGCTCAGTACAGGAT................................................................................... 21 2 6 0.17 1 1 0

Anti-sense strand reads

TCGGTCCCGCTCCCACGTACCACGGACACTTGTCCGCCGTCCTCCGAGGCGTCGGCCGAGACTGGTAGAGGCGGGAGGGACTCCCTGGGACATGACTCGACGGGACTCCGGGAACGGACGCGGGTCGAGCCCCGCCGAGTCAGGTCCTACGTAGCCCCACCCTCAGTCGCCCTTACCTCCTTCGGGGCACCGGGGCCCCGGACGCGCGGGTCGGCTACCAAGGCAAGGTCGG
***********************************.....((.((((.((.....((((((..((((.((((((((((((((.....((((.((((((((((((((((......((....))....)))))))))))))))).)))).....)))))).))).....))))).)))).)).)))).)).))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
.....................................................................................TAGGACATGACTCGACGGGGC.............................................................................................................................. 21 2 6 0.17 1 1

Generated: 05/16/2015 at 12:52 AM