ID:

ocu-mir-451a

 Coordinate:

chr19:19330461-19330532 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.5 -49.3 -49.0

Sense Strand Reads

GCCCAGAGGCTCACCACTCAGTCCATCACAGCCTGCCCACTCCCCGTGCACTTGGGAATGGCGAGGAAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTCTCTTGCTGTACCCAGAAAATGTGCCAGGAAGAGCACTCAAGATTCTGGAGCAGAATACTGGGAGGG
***********************************........((..(((((((((.(((((((((.(((((((((((((((((....))))))))))))))))).))))))))).))))).....))))..))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP		 GSM1528820
Adult_testes
..................................................................AAACCGTTACCATTACTGAGT..................................................................................... 21 0 1 2521.00 2521 2455 66
..................................................................AAACCGTTACCATTACTGAGTTTA.................................................................................. 24 0 1 2118.00 2118 2042 76
..................................................................AAACCGTTACCATTACTGAGTTT................................................................................... 23 0 1 1289.00 1289 379 910
..................................................................AAACCGTTACCATTACTGAGTT.................................................................................... 22 0 1 490.00 490 427 63
..................................................................AAACCGTTACCATTACTGAG...................................................................................... 20 0 1 257.00 257 257 0
.................................................................AAAACCGTTACCATTACTGAGTTTA.................................................................................. 25 1 1 88.00 88 88 0
...................................................................AACCGTTACCATTACTGAGTTTA.................................................................................. 23 0 1 80.00 80 56 24
..................................................................AAACCGTTACCATTACTGAGTTTAGT................................................................................ 26 0 1 76.00 76 2 74
.................................................................AAAACCGTTACCATTACTGAGT..................................................................................... 22 1 1 62.00 62 62 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTT................................................................... 39 0 1 61.00 61 0 61
...................................................................AACCGTTACCATTACTGAGT..................................................................................... 20 0 1 57.00 57 55 2
.......................................................................GTTACCATTACTGAGTTT................................................................................... 18 0 1 38.00 38 0 38
..................................................................AAACCGTTACCATTACTGA....................................................................................... 19 0 1 34.00 34 33 1
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTC.................................................................. 40 0 1 33.00 33 0 33
......................................................................CGTTACCATTACTGAGTTT................................................................................... 19 0 1 32.00 32 0 32
.......................................................................GTTACCATTACTGAGTT.................................................................................... 17 0 1 32.00 32 0 32
...................................................................AACCGTTACCATTACTGAGTTT................................................................................... 22 0 1 27.00 27 16 11
...................................................................AACCGTTACCATTACTGAGTT.................................................................................... 21 0 1 24.00 24 24 0
.................................................................AAAACCGTTACCATTACTGAGTT.................................................................................... 23 1 1 22.00 22 22 0
.................................................................AAAACCGTTACCATTACTGAGTTT................................................................................... 24 1 1 20.00 20 11 9
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTCT................................................................. 41 0 1 19.00 19 0 19
..................................................................TAACCGTTACCATTACTGAGT..................................................................................... 21 1 1 18.00 18 18 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTCGTA............................................................................ 30 3 1 18.00 18 18 0
....................................................................ACCGTTACCATTACTGAGTTTA.................................................................................. 22 0 1 17.00 17 9 8
.......................................................................GTTACCATTACTGAGT..................................................................................... 16 0 1 16.00 16 2 14
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGT.................................................................... 38 0 1 15.00 15 0 15
...................................................................AACCGTTACCATTACTGAGTTTAGTAATGGTAACGG..................................................................... 36 0 1 12.00 12 0 12
.................................................................AAAACCGTTACCATTACTGAGTTTAGTT............................................................................... 28 2 1 10.00 10 10 0
.............................................................CGGAAAAACCGTTACCATTACTGAGT..................................................................................... 26 3 1 9.00 9 9 0
..................................................................TAACCGTTACCATTACTGAGTTTA.................................................................................. 24 1 1 9.00 9 9 0
..................................................................AAACCGTTACCATTACTGAGC..................................................................................... 21 1 1 8.00 8 8 0
.....................................................................CCGTTACCATTACTGAGTTT................................................................................... 20 0 1 7.00 7 0 7
......................................................................CGTTACCATTACTGAGT..................................................................................... 17 0 1 7.00 7 2 5
...................................................................AACCGTTACCATTACTGAG...................................................................................... 19 0 1 6.00 6 6 0
..................................................................AAACCGTTACCATTACTGAGTTTAG................................................................................. 25 0 1 6.00 6 6 0
................................................................AAAAACCGTTACCATTACTGAGTTTA.................................................................................. 26 2 1 6.00 6 6 0
....................................................................ACCGTTACCATTACTGAGT..................................................................................... 19 0 1 6.00 6 5 1
..................................................................AAACCGTTACCATTACTGAGG..................................................................................... 21 1 1 5.00 5 5 0
.............................................................CGGAAAAACCGTTACCATTACTGAGTT.................................................................................... 27 3 1 5.00 5 5 0
..................................................................AAACCGTTACCTTTACTGAGT..................................................................................... 21 1 1 5.00 5 5 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTAAT............................................................................. 29 0 1 5.00 5 5 0
...............................................................GAAAAACCGTTACCATTACTGAGTTTA.................................................................................. 27 3 1 5.00 5 5 0
..................................................................AAACCGTTACCATTACTGCGT..................................................................................... 21 1 1 5.00 5 5 0
.............................................................ATCGGAAACCGTTACCATTACTGAGT..................................................................................... 26 3 1 5.00 5 5 0
..................................................................AAACCGTTACCCTTACTGAGT..................................................................................... 21 1 1 5.00 5 5 0
.....................................................................CCGTTACCATTACTGAGTTTA.................................................................................. 21 0 1 5.00 5 2 3
......................................................................CGTTACCATTACTGAGTTTA.................................................................................. 20 0 1 5.00 5 2 3
..................................................................AAACCGTTATCATTACTGAGT..................................................................................... 21 1 1 5.00 5 5 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGG..................................................................... 37 0 1 5.00 5 0 5
..................................................................AAACCGTTACCATTCCTGAGTTTA.................................................................................. 24 1 1 4.00 4 3 1
....................................................................ACCGTTACCATTACTGAGTTT................................................................................... 21 0 1 4.00 4 4 0
.......................................................................GTTACCATTACTGAGTTTAT................................................................................. 20 1 1 4.00 4 0 4
..................................................................AAACCGTTACCATTACTGCGTT.................................................................................... 22 1 1 4.00 4 4 0
..............................................................GGAAAAACCGTTACCATTACTGAGTTTA.................................................................................. 28 3 1 4.00 4 4 0
......................................................................CGTTACCATTACTGAGTT.................................................................................... 18 0 1 4.00 4 0 4
..................................................................AAACCGATACCATTACTGAGT..................................................................................... 21 1 1 4.00 4 4 0
.................................................................AAAACCGTTACCATTACTGAG...................................................................................... 21 1 1 4.00 4 4 0
..................................................................AAACAGTTACCATTACTGAGT..................................................................................... 21 1 1 4.00 4 4 0
..................................................................AAACCGTGACCATTACTGAGT..................................................................................... 21 1 1 3.00 3 3 0
.............................................................CGGAAAAACCGTTACCATTACTGAGTTT................................................................................... 28 3 1 3.00 3 3 0
...............................................................CGGAAACCGTTACCATTACTGAGTTTA.................................................................................. 27 1 1 3.00 3 3 0
.......................................................................GTTACCATTACTGAGTTTAGT................................................................................ 21 0 1 3.00 3 0 3
..................................................................AAACCGTAACCATTACTGAGTTT................................................................................... 23 1 1 3.00 3 1 2
...................................................................AACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTT................................................................... 38 0 1 3.00 3 0 3
..................................................................AAACCGGTACCATTACTGAGTTTA.................................................................................. 24 1 1 3.00 3 3 0
.............................................................CGGAAAAACCGTTACCATTACTGAG...................................................................................... 25 3 1 3.00 3 3 0
.......................................................................GTTACCATTACTGAGTTTA.................................................................................. 19 0 1 3.00 3 3 0
..................................................................AAACCGTTACCATTACTGAGTTA................................................................................... 23 1 1 3.00 3 2 1
......................................................................CGTTACCATTACTGAGTTTAGT................................................................................ 22 0 1 3.00 3 0 3
........................................................................TTACCATTACTGAGTT.................................................................................... 16 0 1 3.00 3 0 3
..................................................................AAACCGTTTCCATTACTGAGTTTA.................................................................................. 24 1 1 3.00 3 3 0
........................................................................TTACCATTACTGAGTTT................................................................................... 17 0 1 3.00 3 0 3
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATG............................................................................ 30 0 1 3.00 3 0 3
..................................................................AAACCGTTACCATTACTGAGTTTAGTA............................................................................... 27 0 1 3.00 3 3 0
..................................................................AAACCGTTCCCATTACTGAGT..................................................................................... 21 1 1 3.00 3 3 0
..................................................................AAACCGTTACTATTACTGAGTTTA.................................................................................. 24 1 1 3.00 3 3 0
..................................................................AAACCGTTACCATTACTGGGTTTA.................................................................................. 24 1 1 3.00 3 3 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTCC................................................................. 41 1 1 3.00 3 0 3
..................................................................AAACCGTTACCATTACTGAGTTAT.................................................................................. 24 2 1 2.00 2 2 0
..................................................................AAACCGTTAGCATTACTGAG...................................................................................... 20 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTCCTGAGT..................................................................................... 21 1 1 2.00 2 2 0
....................................................................ACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTT................................................................... 37 0 1 2.00 2 0 2
...................................................................AACCGTTACCATTACTGAGTTTAGTCGTA............................................................................ 29 3 1 2.00 2 2 0
...................................................................AACCGTTACCATTACTGAGTTTAGT................................................................................ 25 0 1 2.00 2 0 2
..................................................................AAACCGTTACCCTTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................AAAACGTTACCATTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
.....................................................................CCGTTACCATTACTGAGTT.................................................................................... 19 0 1 2.00 2 0 2
..................................................................AGACCGTTACCATTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATCACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGCTACCATTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGAGA..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGAGTTTTCGAA.............................................................................. 28 3 1 2.00 2 2 0
..................................................................AAACCCTTACCATTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTTCGG............................................................................ 30 3 1 2.00 2 2 0
..................................................................AAACCGTTACCGTTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGAGCTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................AAACCGTTATCATTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................AAACCGTTCCCATTACTGAGTTT................................................................................... 23 1 1 2.00 2 1 1
..................................................................AAACCGTTCCCATTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTTAGTTT................................................................................... 23 1 1 2.00 2 0 2
..................................................................AAACCGTTACCATTACTGAGTTTTGCC............................................................................... 27 3 1 2.00 2 2 0
..............................................................TGGTAAACCGTTACCATTACTGAGTTT................................................................................... 27 3 1 2.00 2 0 2
....................................................................ACCGTTACCATTACTGAGTTTAGTAATGGTAACGG..................................................................... 35 0 1 2.00 2 0 2
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTA................................................................... 39 1 1 2.00 2 0 2
..............................................................GGAAAAACCGTTACCATTACTGAGTT.................................................................................... 26 3 1 2.00 2 2 0
..................................................................AAACCGGTACCATTACTGAGTTT................................................................................... 23 1 1 2.00 2 0 2
..................................................................AAACCGTTACCATTACTGAGTTTTGT................................................................................ 26 1 1 2.00 2 0 2
...............................................................TGGAAACCGTTACCATTACTGAGTTT................................................................................... 26 1 1 2.00 2 0 2
..................................................................AAACCGTTACCATTGCTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTAACCATTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTTCG............................................................................. 29 3 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGCGTTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................CAACCGTTACCATTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
............................................................GCGGAAAAACCGTTACCATTACTGAG...................................................................................... 26 3 1 2.00 2 2 0
..................................................................AAACCGTTACCATTACTGGGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTAACCATTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
..................................................................AAACCGTTACCATTAATGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AAACCGTTACTATTACTGAGT..................................................................................... 21 1 1 2.00 2 2 0
..................................................................AACCCGTTACCATTACTGAGT..................................................................................... 21 1 1 2.00 2 1 1
...................................................................AACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTC.................................................................. 39 0 1 2.00 2 0 2
..................................................................AAACTGTTACCATTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
...............................................................GAAAAACCGTTACCATTACTGAGTT.................................................................................... 25 3 1 2.00 2 2 0
..................................................................AAACCGTTACAATTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0
.................................................................AAAACCGTTACCATTAATGAGTTTA.................................................................................. 25 2 1 2.00 2 2 0
..................................................................AAACCGTCACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
............................................................ACGAAAAAACCGTTACCATTACTGAGTTTA.................................................................................. 30 3 1 1.00 1 1 0
..................................................................AAACCGGTACCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
..................................................................AAACCATTACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
.............................................................ATCGGAAACCGTTACCATTACTGAGTTTA.................................................................................. 29 3 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTAAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTGGTTAT............................................................................. 29 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTTGTAATGGTAACGGT.................................................................... 38 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGTTTAATAATGGTAACGGTT................................................................... 39 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATCACTGAGTTTAGT................................................................................ 26 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGATTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACTATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0
..............................................................GACGAAACCGTTACCATTACTGAGT..................................................................................... 25 1 1 1.00 1 1 0
..................................................................AAACTGTTACCATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGCTACCATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGGTACCATTACTGAGTTTAGTAATGGTAACGGT.................................................................... 38 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGGTTA.................................................................................. 24 1 1 1.00 1 1 0
..............................................................GCGGAAACCGTTACCATTACTGAG...................................................................................... 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTTCTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTCT................................................................................... 23 1 1 1.00 1 0 1
.................................................................AAAACCGTTACCATTACTGCGTTTA.................................................................................. 25 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTCACC................................................................................ 26 3 1 1.00 1 1 0
..................................................................AAACCGTTACCATCACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACAGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................TAACCGTTACCATTACTGAG...................................................................................... 20 1 1 1.00 1 1 0
...................................................................AACCGTTATCATTACTGAGTTTA.................................................................................. 23 1 1 1.00 1 1 0
..................................................................ATACCGTTACCTTTACTGAGT..................................................................................... 21 2 1 1.00 1 1 0
.................................................................AAAACCGTTACCATTACTGA....................................................................................... 20 1 1 1.00 1 1 0
....................................................................ACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTCT................................................................. 39 0 1 1.00 1 0 1
..................................................................AAACCGTTAGCATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0
...................................................................AACCGTTCCCATTACTGAGTT.................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGTTACCGTTACTGAGTTTAGTAATGGTAACGGT.................................................................... 38 1 1 1.00 1 0 1
..................................................................ACACCGTTACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTATCG............................................................................ 30 2 1 1.00 1 1 0
.................................................................AAAACCGTTACAATTACTGAGT..................................................................................... 22 2 1 1.00 1 1 0
.................................................................AAAACCTTTACCATTACTGAGTTTA.................................................................................. 25 2 1 1.00 1 1 0
..............................................................AAAAAAACCGTTACCATTACTGAGTTT................................................................................... 27 3 1 1.00 1 0 1
.................................................................CAAACCGTTACCATTACTGAGT..................................................................................... 22 1 1 1.00 1 1 0
..............................................................GGGCAAACCGTTACCATTACTGAGT..................................................................................... 25 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGACTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTGACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGGGTT.................................................................................... 22 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATT............................................................................ 30 1 1 1.00 1 1 0
..................................................................AAACCGTTATCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTTCGAATG............................................................................ 30 3 1 1.00 1 1 0
...............................................................CGGAAACCGTTACCATTACTGAGTTTAGTT............................................................................... 30 2 1 1.00 1 1 0
.................................................................GAAACCGTTACCATTACTGAGTTTA.................................................................................. 25 0 1 1.00 1 1 0
.............................................................CGAAAAAACCGTTACCATTACTGAGT..................................................................................... 26 2 1 1.00 1 1 0
..................................................................AAGCCGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0
..................................................................TAACCGTTACCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
..................................................................TAACCGATACCATTACTGAGTTT................................................................................... 23 2 1 1.00 1 1 0
..................................................................AAACCGTGACCATTACTGAG...................................................................................... 20 1 1 1.00 1 1 0
.............................................................AGGGCAAACCGTTACCATTACTGAG...................................................................................... 25 3 1 1.00 1 1 0
..................................................................AAACCGTTACAATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGACTTT................................................................................... 23 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGCGTTT................................................................................... 23 1 1 1.00 1 0 1
......................................................................CGTTACCATTACTGAGTTTAGTAATG............................................................................ 26 0 1 1.00 1 1 0
..............................................................GCGGAAACCGTTACCATTACTGAGTT.................................................................................... 26 1 1 1.00 1 1 0
..................................................................AAACCGTAACCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
..................................................................AAAACGTTACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
.................................................................AAAACCGTTACCATTACTGCGTT.................................................................................... 23 2 1 1.00 1 1 0
..................................................................AAACCGTTTCCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
............................................................GACAGAAAACCGTTACCATTACTGAGTTTA.................................................................................. 30 3 1 1.00 1 1 0
..............................................................CGGAAAACCGTTACCATTACTGAGTTTA.................................................................................. 28 3 1 1.00 1 1 0
.................................................................AAAACCGTTACCATTACTGAGTTTTGTT............................................................................... 28 3 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTTAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTCTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTGT................................................................................. 25 2 1 1.00 1 1 0
.................................................................AAAACCGGTACCATTACTGCGTTTA.................................................................................. 25 3 1 1.00 1 1 0
..................................................................AAAACGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 1
..................................................................AAACCGATACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
...............................................................ATCAAACCGTTACCATTACTGAGTTTA.................................................................................. 27 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATTATTGAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGTGACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTAACATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
.....................................................................CCGTTACCATTACTGAGTTTAGTAATGGTAACGGTT................................................................... 36 0 1 1.00 1 0 1
.................................................................AAAACCGTTACCATTACTGAGTTTAGTAATGGTA......................................................................... 34 1 1 1.00 1 1 0
..................................................................AAACAGTTACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTCGC................................................................................ 26 2 1 1.00 1 1 0
..................................................................ATACCGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0
..................................................................AACCCGTTACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGTGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTCAGTTTAGTAATGGTAACGGTTC.................................................................. 40 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACT......................................................................................... 17 0 1 1.00 1 1 0
........................................................................TTACCATTACTGAGTTTA.................................................................................. 18 0 1 1.00 1 1 0
..................................................................AAACCGTTACCATTCCTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
................................................................AAAAACCGTTACCATTACTGAGTTTAGTT............................................................................... 29 3 1 1.00 1 1 0
..................................................................AAACCGTTACGATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGCGTTTAGT................................................................................ 26 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGTTTAGTTTT............................................................................. 29 2 1 1.00 1 1 0
...........................................................GGGTAAGAAACCGTTACCATTACTGAGT..................................................................................... 28 3 1 1.00 1 1 0
................................................................TAAAAGCGTTACCATTACTGAGTTTA.................................................................................. 26 3 1 1.00 1 1 0
.................................................................AAAACCGCTACCATTACTGAGTTTA.................................................................................. 25 2 1 1.00 1 1 0
...................................................................AACCGTTACCATTACTGTGTTTA.................................................................................. 23 1 1 1.00 1 0 1
...........................................................TGCGTTGAAACCGTTACCATTACTGAGT..................................................................................... 28 3 1 1.00 1 1 0
...................................................................AACCGTTAACATTACTGAGTTTA.................................................................................. 23 1 1 1.00 1 0 1
.............................................................................ATTACTGAGTTTAGTA............................................................................... 16 0 1 1.00 1 1 0
................................................................AAAAACCGTTACCATTACTGAGTT.................................................................................... 24 2 1 1.00 1 1 0
.............................................................TCAGAAAACCGTTACCATTACTGAGTTTA.................................................................................. 29 3 1 1.00 1 1 0
................................................................ACAAACCGTTACCATTACTGAGTTTA.................................................................................. 26 2 1 1.00 1 1 0
..................................................................ACACCGTTACCATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTAAGTTT................................................................................... 23 1 1 1.00 1 0 1
.............................................................CGGGAAAACCGTTACCATTACTGAGT..................................................................................... 26 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTTATCA........................................................................... 31 3 1 1.00 1 1 0
.................................................................ACAACCGTTACCATTACTGAGTTTA.................................................................................. 25 2 1 1.00 1 1 0
.................................................................AAAACCGTTACCATTACTGAGCTT................................................................................... 24 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATCACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..............................................................CGGAAAACCGTTACCATTACTGAGT..................................................................................... 25 3 1 1.00 1 1 0
...................................................................ATCCGTTACCATTACTGAGT..................................................................................... 20 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTAATGGGAACGGTTCT................................................................. 41 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTG........................................................................................ 18 0 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGGGTTTAGTAATGGTAACGGTTCT................................................................. 41 1 1 1.00 1 0 1
..............................................................TCGGAAACCGTTACCATTACTGAGTTTA.................................................................................. 28 2 1 1.00 1 1 0
................................................................AAAAACCGTTACCATTACTGAGT..................................................................................... 23 2 1 1.00 1 1 0
....................................................................ACCGTTACCATTACTGAGTT.................................................................................... 20 0 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACCGAGTT.................................................................................... 22 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTATTGAGTTT................................................................................... 23 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGTTTC.................................................................................. 24 1 1 1.00 1 1 0
............................................................GCTTAGAAACCGTTACCATTACTGAGT..................................................................................... 27 3 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTGAGGT.................................................................................... 22 1 1 1.00 1 1 0
.................................................................AAAACCGTTACCATTACTGAGTTTAGTAATGGTAACGGTTC.................................................................. 41 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGTTTAA................................................................................. 25 1 1 1.00 1 0 1
..............................................................GATTAAACCGTTACCATTACTGAGT..................................................................................... 25 2 1 1.00 1 1 0
..................................................................AAACCGGTACCATTACTGAGGTT................................................................................... 23 2 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGTTTAGTATT............................................................................. 29 1 1 1.00 1 1 0
..................................................................ATACCGTTACCATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0
.............................................................CGGAAAAACCGTTACCATTACTGAGTTTA.................................................................................. 29 3 1 1.00 1 1 0
...............................................................GAAAAACCGTTACCATTACTGAGT..................................................................................... 24 3 2 1.00 2 2 0
.................................................................GAAACCGTTACCATTACTGAGT..................................................................................... 22 0 1 1.00 1 1 0
....................................................................ACCGTTACCATTACTGAG...................................................................................... 18 0 1 1.00 1 1 0
..................................................................AAACCGTTAGCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
.................................................................AAAACCGTTACCATTACTGAGTTTAGTAAT............................................................................. 30 1 1 1.00 1 1 0
...........................................................................CCATTACTGAGTTTAGT................................................................................ 17 0 1 1.00 1 0 1
..................................................................AAACCGATACCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
...................................................................AACCGGTACCATTACTGAGT..................................................................................... 20 1 1 1.00 1 1 0
..................................................................AAACCGTTACCATTACTCAGTTT................................................................................... 23 1 1 1.00 1 0 1
..................................................................AAACCGCTACCATTACTGAGG..................................................................................... 21 2 1 1.00 1 1 0
..................................................................AAACCGTTACCATTATTGAGTT.................................................................................... 22 1 1 1.00 1 1 0
..................................................................AAACCGTTACCACTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0
..................................................................AAACCGTTAACATTACTGAGT..................................................................................... 21 1 1 1.00 1 0 1
..................................................................AAACCGTTACCATTACTGAGTTTGGTT............................................................................... 27 2 1 1.00 1 1 0
..................................................................AAACCGTTATCATTACTGAG...................................................................................... 20 1 2 1.00 2 2 0
..................................................................AAACCGTTACCATTACTGAGATT................................................................................... 23 1 1 1.00 1 1 0
..............................................................ATGGAAACCGTTACCATTACTGAGTTTA.................................................................................. 28 2 1 1.00 1 1 0
.................................................................AAAACCGTTTCCATTACTGAGTTT................................................................................... 24 2 1 1.00 1 1 0
...................................................................AACCATTACCATTACTGAGTTTAGTAATGGTAACGGTT................................................................... 38 1 1 1.00 1 0 1
..............................................................CGGTAAACCGTTACCATTACTGAGTTTA.................................................................................. 28 3 1 1.00 1 1 0
...............................................................GAAAAACCGTTACCATTACTGAG...................................................................................... 23 3 3 0.67 2 2 0
......................................................................CGTTACCATTACTGA....................................................................................... 15 0 2 0.50 1 1 0
....................................................................ACCGTTACCATTACTGAGAT.................................................................................... 20 1 2 0.50 1 1 0
..................................................................TAACCGTAACCATTACTGAGT..................................................................................... 21 2 4 0.50 2 2 0
............................................................................CATTACTGAGTTTAGT................................................................................ 16 0 2 0.50 1 0 1
.................................................................AAAATCGTTACCATTACTGAG...................................................................................... 21 2 2 0.50 1 1 0
......................................................................CGTTACCATTCCTGAGTTT................................................................................... 19 1 2 0.50 1 0 1
..............................................................GGAAAAACCGTTACCATTACTGAGT..................................................................................... 25 3 2 0.50 1 1 0
.......................................................................GTTACCATTACTGAG...................................................................................... 15 0 7 0.43 3 0 3
.................................................................................................................................................ACATTCTGGAGCGCAATACTGGGAG.. 25 3 3 0.33 1 1 0
.................................................................AAAACCATTACCATTACTGAGT..................................................................................... 22 2 3 0.33 1 1 0
........................................................................TTACCATTACTGAGT..................................................................................... 15 0 6 0.33 2 2 0
..............................................................GGAAAAACCGTTACCATTACTGA....................................................................................... 23 3 4 0.25 1 1 0
..................................................................AAACCGTTACCATTACTTGGTGT................................................................................... 23 3 6 0.17 1 1 0
..................................................................AAACCGTTACCATTACAGT....................................................................................... 19 2 8 0.13 1 1 0
........................................................................ATACCATTACTGAGTTT................................................................................... 17 1 16 0.06 1 0 1

Anti-sense strand reads

CGGGTCTCCGAGTGGTGAGTCAGGTAGTGTCGGACGGGTGAGGGGCACGTGAACCCTTACCGCTCCTTTGGCAATGGTAATGACTCAAATCATTACCATTGCCAAGAGAACGACATGGGTCTTTTACACGGTCCTTCTCGTGAGTTCTAAGACCTCGTCTTATGACCCTCCC
***********************************........((..(((((((((.(((((((((.(((((((((((((((((....))))))))))))))))).))))))))).))))).....))))..))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:39 AM