ID:

ocu-mir-450a-1

Coordinate:

chrX:108850156-108850246 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-33.4

mature

star

Sense Strand Reads

TGGACTCTAAAAGTGATTGTGTCTGAGCTGTAGCACTGTAGGAGATCAAAGAAAGATGCTAAACTGTTTTTGCGATGTGTTCCTAATATGCACTATAATTATATTGGGAACATTTTGCATGCATAGTTTTGTATCAATATACAGACAGAAGGATGGAGGAAATAAACCGAAAGTCTACCAGCGGTTATATG **************************************************..(((((.(((((((...(((((.((((((((((((((.........)))))))))))))).)))))...))))))).)))))....**************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
...................................................................TTTTGCGATGTGTTCCTAAT........................................................................................................	20	0	2	89.00	178	172	6
...................................................................TTTTGCGATGTGTTCCTAATAT......................................................................................................	22	0	2	40.50	81	81	0
...................................................................TTTTGCGATGTGTTCCTAATA.......................................................................................................	21	0	2	15.00	30	27	3
..................................................................ATTTTGCGATGTGTTCCTAAT........................................................................................................	21	1	2	6.50	13	8	5
....................................................................TTTGCGATGTGTTCCTAAT........................................................................................................	19	0	2	4.50	9	9	0
......................................................................................................ATTGGGAACATTTTGCATGCAT...................................................................	22	0	1	4.00	4	4	0
......................................................................................................ATTGGGAACATTTTGCATGC.....................................................................	20	0	1	3.00	3	0	3
.......................................................................................................TTGGGAACATTTTGCATGCAT...................................................................	21	0	1	3.00	3	3	0
....................................................................TTTGCGATGTGTTCCTAATAT......................................................................................................	21	0	2	2.00	4	4	0
...................................................................TTTTGCGATGTGTTCCTAA.........................................................................................................	19	0	2	2.00	4	3	1
...................................................................TTTTGCGATGTGTTCCTA..........................................................................................................	18	0	2	1.50	3	1	2
...................................................................TTTTTCGATGTGTTCCTAAT........................................................................................................	20	1	2	1.50	3	3	0
...............................................................CGCATTTTGCGATGTGTTCCTAAT........................................................................................................	24	3	2	1.50	3	3	0
..............................................................AACGCTTTTGCGATGTGTTCCTAAT........................................................................................................	25	3	1	1.00	1	0	1
.......................................................................................................TTGGGAACATTTTGCATG......................................................................	18	0	1	1.00	1	1	0
....................................................................TTTGCGATGTGTTCCTAAA........................................................................................................	19	1	3	1.00	3	3	0
...................................................................TTTTGCGAAGTGTTCCTAAT........................................................................................................	20	1	2	0.50	1	1	0
......................................................................................................ATTGGGAACATTTTGCA........................................................................	17	0	2	0.50	1	0	1
...................................................................TTTTGCGATGTGTTCCTAATAA......................................................................................................	22	1	2	0.50	1	1	0
...................................................................TTTTGCGATGGGTTCCTAAT........................................................................................................	20	1	2	0.50	1	1	0
...................................................................TTTTGTGATGTGTTCCTAAT........................................................................................................	20	1	2	0.50	1	1	0
...................................................................TTTTGCGATGTGTTCCTAATATG.....................................................................................................	23	0	2	0.50	1	0	1
..............................................................AAGCTTTTTGCGATGTGTTCCTAA.........................................................................................................	24	3	2	0.50	1	0	1
.......................................................................................................TTGGGAACATTTTGCAT.......................................................................	17	0	2	0.50	1	1	0
................................................................ATATTTTGCGATGTGTTCCTAAT........................................................................................................	23	3	7	0.43	3	3	0
....................................................................TTTGCGTTGTGTTCCTAATAT......................................................................................................	21	1	3	0.33	1	1	0
...................................................................TTTTGCGATGTGTTCCTAAA........................................................................................................	20	1	3	0.33	1	1	0
..................................................................ATTTTGCGATGTGTTCCTA..........................................................................................................	19	1	3	0.33	1	0	1
.................................................................TCTTTTGCGATGTGTTCCTA..........................................................................................................	20	2	3	0.33	1	0	1
...................................................................TTTTGCGATGTGTTCCTAAAT.......................................................................................................	21	2	7	0.14	1	1	0

Anti-sense strand reads

ACCTGAGATTTTCACTAACACAGACTCGACATCGTGACATCCTCTAGTTTCTTTCTACGATTTGACAAAAACGCTACACAAGGATTATACGTGATATTAATATAACCCTTGTAAAACGTACGTATCAAAACATAGTTATATGTCTGTCTTCCTACCTCCTTTATTTGGCTTTCAGATGGTCGCCAATATAC **************************************************..(((((.(((((((...(((((.((((((((((((((.........)))))))))))))).)))))...))))))).)))))....**************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 05/16/2015 at 01:03 AM