ID:

ocu-mir-449a

 Coordinate:

chr11:71142251-71142341 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-41.7 -41.7 -41.7

Sense Strand Reads

GCCACTTGCCTCTGGCTAAATTGCTCTTGCTCATGAAGTGCCCTTGTTACCGGTGTGTGATGAGGTGGCAGTGTATTGTTAGCTGGTTGAATATGTGTGTGATATCAGCTAACATACAACTGCTATCTTATTGCATTTACAATGGACGTCAGATGGTAATTTGATTTGCAATTTCTGTGTATATGTATGTG
**************************************************....((((((((((((((((((((((.((((((((((...(((....)))...)))))))))))))).)))))))))))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
.................................................................TGGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 0 1 38227.00 38227 38010 217
..................................................................GGCAGTGTATTGTTAGCTGGT........................................................................................................ 21 0 1 5544.00 5544 5507 37
................................................................ATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 23 1 1 399.00 399 368 31
.................................................................TGGCAGTGTATTGTTAGCTGGTT....................................................................................................... 23 0 1 333.00 333 309 24
.................................................................TGGCAGTGTATTGTTAGCTGGTA....................................................................................................... 23 1 1 233.00 233 136 97
.................................................................TGGCAGTGTATTGTTAGCTGGC........................................................................................................ 22 1 1 202.00 202 201 1
.................................................................TGGCAGTGTATTGTTAGCTG.......................................................................................................... 20 0 1 186.00 186 70 116
.................................................................TGGCAGTGTATTGTTAGCTGG......................................................................................................... 21 0 1 178.00 178 120 58
.........................................................................................................CAGCTAACATACAACTGCTAT................................................................. 21 0 1 149.00 149 147 2
.................................................................TGGCCGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 137.00 137 137 0
.................................................................TGGCAGTGTATTGTTAGCTGGG........................................................................................................ 22 1 1 127.00 127 127 0
.................................................................TGGCAGTGTATTGTTAGCT........................................................................................................... 19 0 1 123.00 123 109 14
......................................................................GTGTATTGTTAGCTGGT........................................................................................................ 17 0 2 120.50 241 220 21
.................................................................TGGCAGGGTATTGTTAGCTGGT........................................................................................................ 22 1 1 117.00 117 117 0
........................................................................GTATTGTTAGCTGGT........................................................................................................ 15 0 2 88.50 177 177 0
.....................................................................AGTGTATTGTTAGCTGGT........................................................................................................ 18 0 1 71.00 71 71 0
.................................................................TGGCAGTGTATTGTTAGCTTGT........................................................................................................ 22 1 1 70.00 70 70 0
.................................................................TGGCAGTGCATTGTTAGCTGGT........................................................................................................ 22 1 1 60.00 60 60 0
....................................................................CAGTGTATTGTTAGCTGGT........................................................................................................ 19 0 1 56.00 56 56 0
...................................................................GCAGTGTATTGTTAGCTGGT........................................................................................................ 20 0 1 51.00 51 51 0
.................................................................TGGCAGTGGATTGTTAGCTGGT........................................................................................................ 22 1 1 50.00 50 50 0
.................................................................TGGCAGAGTATTGTTAGCTGGT........................................................................................................ 22 1 1 48.00 48 48 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAT...................................................................................................... 24 2 2 46.50 93 88 5
.................................................................TGGCAGCGTATTGTTAGCTGGT........................................................................................................ 22 1 1 43.00 43 42 1
.................................................................TGGCAGTGTATTGTTAGCCGGT........................................................................................................ 22 1 1 43.00 43 43 0
.................................................................TGGCGGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 41.00 41 41 0
.................................................................TGGCAGTGTATTGTTATCTGGT........................................................................................................ 22 1 1 40.00 40 39 1
.................................................................TGGCAGTGTATTGTTAGCTGGTAA...................................................................................................... 24 2 1 38.00 38 13 25
.................................................................TGGCAGTGTATTGTTAGCTGT......................................................................................................... 21 1 1 32.00 32 32 0
.................................................................TGGCAGTGTCTTGTTAGCTGGT........................................................................................................ 22 1 1 32.00 32 30 2
..................................................................GGCAGGGTATTGTTAGCTGGT........................................................................................................ 21 1 1 32.00 32 32 0
.................................................................TGACAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 28.00 28 28 0
.................................................................TGGCAGTGTGTTGTTAGCTGGT........................................................................................................ 22 1 1 27.00 27 27 0
................................................................ATGGCAGTGTATTGTTAGCTG.......................................................................................................... 21 1 1 26.00 26 2 24
.................................................................TGGCAGTGTTTTGTTAGCTGGT........................................................................................................ 22 1 1 26.00 26 26 0
.................................................................TGGCAGTGTATTGTTAGCTGGTTT...................................................................................................... 24 1 1 26.00 26 11 15
.................................................................TGGCAGTGAATTGTTAGCTGGT........................................................................................................ 22 1 1 26.00 26 25 1
.................................................................TGGCAGTGTATTTTTAGCTGGT........................................................................................................ 22 1 1 25.00 25 25 0
.................................................................CGGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 25.00 25 25 0
.......................................................................TGTATTGTTAGCTGGT........................................................................................................ 16 0 2 24.50 49 47 2
..................................................................GGCAGTGTATTGTTAGCTG.......................................................................................................... 19 0 1 22.00 22 13 9
..................................................................GGCAGTGTATTGTTAGCTGG......................................................................................................... 20 0 1 21.00 21 13 8
..................................................................GGCAGTGTATTGTTAGCTGGC........................................................................................................ 21 1 1 21.00 21 21 0
.................................................................TGGCAGTGTATTGTTAGC............................................................................................................ 18 0 1 19.00 19 19 0
.................................................................TGGCTGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 19.00 19 18 1
.........................................................................................................CAGCTAACATACAACTGCTATT................................................................ 22 1 1 19.00 19 19 0
.................................................................TGGCAGTGTATCGTTAGCTGGT........................................................................................................ 22 1 1 18.00 18 18 0
.................................................................TGGCAGTTTATTGTTAGCTGGT........................................................................................................ 22 1 1 18.00 18 18 0
.................................................................TGGCAGTGTATTGTTACCTGGT........................................................................................................ 22 1 1 18.00 18 18 0
................................................................ATGGCAGTGTATTGTTAGCTGGTT....................................................................................................... 24 1 1 17.00 17 15 2
................................................................ATGGCAGTGTATTGTTAGCTGGTA....................................................................................................... 24 2 1 17.00 17 10 7
.................................................................TGGCAGTGTATTGCTAGCTGGT........................................................................................................ 22 1 1 17.00 17 17 0
.................................................................TGGCAGTGTATTGTTAGTTGGT........................................................................................................ 22 1 1 16.00 16 16 0
.................................................................TTGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 15.00 15 15 0
..................................................................GGCAGTGTATTGTTAGCTGGTT....................................................................................................... 22 0 1 15.00 15 11 4
.........................................................................................................CAGCTAACATACAACTGCTATC................................................................ 22 0 1 15.00 15 15 0
..................................................................GGCAGTGTATTGTTAGCTGGTA....................................................................................................... 22 1 1 15.00 15 6 9
.................................................................TGGCAGTGTATTGTTAGCTGGAT....................................................................................................... 23 1 1 14.00 14 13 1
..................................................................GGCCGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 14.00 14 14 0
..........................................................................................................AGCTAACATACAACTGCTAT................................................................. 20 0 1 14.00 14 14 0
.................................................................TGGTAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 14.00 14 13 1
.................................................................GGGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 14.00 14 14 0
..................................................................GGCAGTGTATTGTTAGCT........................................................................................................... 18 0 1 14.00 14 13 1
.................................................................AGGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 13.00 13 12 1
..................................................................GGCAGCGTATTGTTAGCTGGT........................................................................................................ 21 1 1 13.00 13 13 0
.................................................................TGGCAGTGTATTGTTAGCTGGA........................................................................................................ 22 1 2 12.50 25 22 3
..................................................................GGCAGTGAATTGTTAGCTGGT........................................................................................................ 21 1 1 12.00 12 12 0
................................................................ATGGCAGTGTATTGTTAGCTGG......................................................................................................... 22 1 1 12.00 12 4 8
.................................................................TGGAAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 12.00 12 11 1
.................................................................TGGCAGTGTATTGTTAGCTGCT........................................................................................................ 22 1 1 12.00 12 12 0
.................................................................TGGCAGTGTATTGTTAACTGGT........................................................................................................ 22 1 1 12.00 12 12 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAAT..................................................................................................... 25 3 2 12.00 24 23 1
.........................................................................................................CAGCTAACATACAACTGCTA.................................................................. 20 0 1 11.00 11 7 4
..................................................................GGCAGTGTATTGTTAGCTGGG........................................................................................................ 21 1 1 11.00 11 11 0
.................................................................TGCCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 11.00 11 11 0
.................................................................TGGCAGTGTATTGTTAGCTGGTC....................................................................................................... 23 1 1 10.00 10 10 0
..................................................................GGCAGTGGATTGTTAGCTGGT........................................................................................................ 21 1 1 10.00 10 9 1
.................................................................TGGCAGTCTATTGTTAGCTGGT........................................................................................................ 22 1 1 10.00 10 10 0
.................................................................TGGCAGTGTATTGTTAGCTGA......................................................................................................... 21 1 1 9.00 9 9 0
.................................................................TGGCAGTGTATTGTTAGCTAGT........................................................................................................ 22 1 1 9.00 9 9 0
.................................................................TGGCAGTGTATTGTTAGCTGTT........................................................................................................ 22 1 1 9.00 9 9 0
.................................................................TGTCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 9.00 9 9 0
.................................................................TGGCAGTGTATTGTTAGCTGAT........................................................................................................ 22 1 1 9.00 9 9 0
..................................................................GGCAGAGTATTGTTAGCTGGT........................................................................................................ 21 1 1 9.00 9 9 0
..................................................................GGCAGTGCATTGTTAGCTGGT........................................................................................................ 21 1 1 8.00 8 8 0
.........................................................................................................CAGCTAACATACAACTGCT................................................................... 19 0 1 8.00 8 4 4
.................................................................TGGCAATGTATTGTTAGCTGGT........................................................................................................ 22 1 1 8.00 8 8 0
..................................................................GGCAGTGTATTGTTATCTGGT........................................................................................................ 21 1 1 8.00 8 8 0
..................................................................GACAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 8.00 8 8 0
.................................................................TGGCAGTGTATTGTTA.............................................................................................................. 16 0 1 7.00 7 7 0
..................................................................TGCAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 7.00 7 7 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAAA..................................................................................................... 25 2 1 7.00 7 1 6
.................................................................TGGCAGTATATTGTTAGCTGGT........................................................................................................ 22 1 1 7.00 7 7 0
.................................................................TGGCATTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 7.00 7 7 0
.................................................................TGGCAGTGTATTGTTAGATGGT........................................................................................................ 22 1 1 7.00 7 7 0
.................................................................TGGCAGTGTATTGTTAG............................................................................................................. 17 0 1 7.00 7 4 3
..................................................................GGCAGTGTATTGTTAGCTGGTAA...................................................................................................... 23 2 1 7.00 7 2 5
...............................................................AATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 24 2 1 7.00 7 7 0
.................................................................TGGGAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 6.00 6 6 0
................................................................ATGGCAGTGTATTGTTAGCTGGTTT...................................................................................................... 25 2 1 6.00 6 5 1
.................................................................TGGCAGTGTATTCTTAGCTGGT........................................................................................................ 22 1 1 6.00 6 6 0
.................................................................TGGCAGTGTATTGTTAGCTGGTG....................................................................................................... 23 1 1 6.00 6 3 3
..................................................................GGCAGTGTATTGTTAGCCGGT........................................................................................................ 21 1 1 6.00 6 6 0
.................................................................TGGCAGTGTATTGTTGGCTGGT........................................................................................................ 22 1 1 6.00 6 6 0
.................................................................TGGCAGTGTATTGTTAGCTGGTTA...................................................................................................... 24 1 1 6.00 6 0 6
.................................................................TGGCAGTGTATTGTTCGCTGGT........................................................................................................ 22 1 1 6.00 6 6 0
.......................................................................................................ATCAGCTAACATACAACTGCTA.................................................................. 22 0 1 6.00 6 0 6
..................................................................GGCAGTGTATTGTTAGCTTGT........................................................................................................ 21 1 1 6.00 6 6 0
..................................................................GGCAGTGTGTTGTTAGCTGGT........................................................................................................ 21 1 1 5.00 5 5 0
..................................................................GGCAGTGTATTGCTAGCTGGT........................................................................................................ 21 1 1 5.00 5 5 0
.................................................................TGGCAGTGTATTGTTAGCTCGT........................................................................................................ 22 1 1 5.00 5 5 0
.............................................................AAAATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 26 3 1 5.00 5 5 0
.................................................................TAGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 5.00 5 5 0
.................................................................TCGCAGTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 5.00 5 5 0
..................................................................GGAAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 5.00 5 5 0
..............................................................GAATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 25 3 2 4.50 9 0 9
..................................................................GGCAGTGTCTTGTTAGCTGGT........................................................................................................ 21 1 1 4.00 4 4 0
.................................................................TGGCAGTGTATTGTTAGCTGGTTAT..................................................................................................... 25 2 1 4.00 4 4 0
..................................................................GGCAGTGTATTGTTAGCTGGTC....................................................................................................... 22 1 1 4.00 4 4 0
.........................................................................................................CAGCTAACATACAACTGCTATA................................................................ 22 1 1 4.00 4 4 0
.................................................................TGGCAGTGTATTGTTAGCTGGTGA...................................................................................................... 24 2 1 4.00 4 0 4
.................................................................TGGCAGTGTATTGTCAGCTGGT........................................................................................................ 22 1 1 4.00 4 4 0
..................................................................GGCGGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 4.00 4 4 0
.........................................................................................................CAGCTAACATACAACTGCTATCT............................................................... 23 0 1 4.00 4 4 0
..................................................................GGCAGTCTATTGTTAGCTGGT........................................................................................................ 21 1 1 4.00 4 4 0
..................................................................GGCAGTGTATTGTTAGTTGGT........................................................................................................ 21 1 1 4.00 4 4 0
...................................................................................................................................TGCATTTACAATGGACGTCAGATGGTA................................. 27 0 1 4.00 4 0 4
...........................................................................................................GCTAACATACAACTGCTAT................................................................. 19 0 1 3.00 3 3 0
.................................................................TGGCAGTGTACTGTTAGCTGGT........................................................................................................ 22 1 1 3.00 3 3 0
..................................................................GGCAGTGTATTCTTAGCTGGT........................................................................................................ 21 1 1 3.00 3 3 0
.................................................................TGGCACTGTATTGTTAGCTGGT........................................................................................................ 22 1 1 3.00 3 3 0
.....................................................................AGTGTATTGTTAGCTGGTT....................................................................................................... 19 0 1 3.00 3 3 0
.................................................................TGGCAGGGTATTGTTAGCTGGTT....................................................................................................... 23 1 1 3.00 3 3 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAAAAT................................................................................................... 27 2 1 3.00 3 3 0
................................................................ATGGCAGTGTATTGTTAGCTGGC........................................................................................................ 23 2 1 3.00 3 3 0
..............................................................AAATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 25 2 1 3.00 3 3 0
................................................................ATGGCAGTGTATTGTTAGCTGGG........................................................................................................ 23 2 1 3.00 3 3 0
..........................................................GATCAAATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 29 3 1 3.00 3 3 0
.....................................................................AGTGTATTGTTAGCTG.......................................................................................................... 16 0 1 3.00 3 0 3
.................................................................TGGCAGTGTATTGTTAGGTGGT........................................................................................................ 22 1 1 3.00 3 3 0
..................................................................GGCAGTGTATTGGTAGCTGGT........................................................................................................ 21 1 1 3.00 3 3 0
..................................................................GGCAGTGTATTGTCAGCTGGT........................................................................................................ 21 1 1 3.00 3 3 0
.................................................................TGGCAGTGTATTGTT............................................................................................................... 15 0 4 2.75 11 11 0
................................................................ATGGCAGTGTATTGTTAGCT........................................................................................................... 20 1 2 2.50 5 5 0
................................................................ATGGCAGTGTATTGTTAGCTGGTAG...................................................................................................... 25 2 1 2.00 2 0 2
..................................................................GGCAGTGTATTGTTAGGTGGT........................................................................................................ 21 1 1 2.00 2 1 1
.................................................................TGGCCGTGCATTGTTAGCTGGT........................................................................................................ 22 2 1 2.00 2 2 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAGT..................................................................................................... 25 2 1 2.00 2 1 1
..................................................................GGGAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 2.00 2 2 0
....................................................................CAGTGTATTGTTAGCTG.......................................................................................................... 17 0 1 2.00 2 0 2
..................................................................GGCAGTGTATTGTTCGCTGGT........................................................................................................ 21 1 1 2.00 2 2 0
.................................................................TGGCAGTGTATTGTTAGCTGGCT....................................................................................................... 23 1 1 2.00 2 2 0
....................................................................CAGTGTATTGTTAGCTGG......................................................................................................... 18 0 1 2.00 2 1 1
..................................................................GCCAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 2.00 2 2 0
...............................................................GGTGGCAGTGTATTGTTAGCTGGTA....................................................................................................... 25 1 1 2.00 2 0 2
.................................................................TGGCAGTGTATTGTTAGCTGCC........................................................................................................ 22 2 1 2.00 2 2 0
.................................................................TGGCAGTGTATTGGTAGCTGGT........................................................................................................ 22 1 1 2.00 2 2 0
...................................................................................................................................TGCATTTACAATGGACGTCAGATGGTAA................................ 28 0 1 2.00 2 0 2
.................................................................TGGCAGTGTATTGTTTGCTGGT........................................................................................................ 22 1 1 2.00 2 2 0
................................................................ATGGCAGCGTATTGTTAGCTGGT........................................................................................................ 23 2 1 2.00 2 2 0
........................................................................................................ACAGCTAACATACAACTGCTAT................................................................. 22 1 1 2.00 2 2 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAG...................................................................................................... 24 1 1 2.00 2 0 2
..................................................................GGCAGTGTTTTGTTAGCTGGT........................................................................................................ 21 1 1 2.00 2 2 0
..................................................................GTCAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 2.00 2 2 0
........................................................................GTATTGTTAGCTGGTT....................................................................................................... 16 0 2 2.00 4 4 0
..................................................................GGCAGTGTACTGTTAGCTGGT........................................................................................................ 21 1 1 2.00 2 2 0
.................................................................TGGCAGTGTATTGTGAGCTGGT........................................................................................................ 22 1 1 2.00 2 2 0
..............................................................GGTTGGCAGTGTATTGTTAGCT........................................................................................................... 22 2 1 2.00 2 2 0
.........................................................................................................CAGCTAACATACAACTG..................................................................... 17 0 1 2.00 2 2 0
...........................................................................................................GCTAACATACAACTGCTATC................................................................ 20 0 1 2.00 2 2 0
.................................................................TGGCAGGGTATTGTTAGCCGGT........................................................................................................ 22 2 1 2.00 2 2 0
...............................................................AATGGCAGTGTATTGTTAGCTG.......................................................................................................... 22 2 2 1.50 3 2 1
..................................................................GGCAGTGTATTGTTAGCTGGA........................................................................................................ 21 1 2 1.50 3 3 0
.................................................................TGGCAGTGTATTGTTAGCTGGTGAT..................................................................................................... 25 3 2 1.50 3 3 0
....................................................................AAGTGTATTGTTAGCTGGT........................................................................................................ 19 1 2 1.50 3 3 0
..................................................................GGCAGTGTATTGTTAGCTT.......................................................................................................... 19 1 3 1.33 4 4 0
.................................................................TGGCAGCGTATTGTTAGCTG.......................................................................................................... 20 1 1 1.00 1 1 0
.......................................................................................................TTCAGCTAACATACAACTGCTA.................................................................. 22 1 1 1.00 1 0 1
................................................................ATGGCAGTATATTGTTAGCTGGT........................................................................................................ 23 2 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCGGGT........................................................................................................ 22 1 1 1.00 1 1 0
....................................................................CAGTGTATTGTTAGCTGGTA....................................................................................................... 20 1 1 1.00 1 0 1
.................................................................TGGCAGTGGATCGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
...............................................................................................................................TTATTGCATTTACAATGGACGTCAGAT..................................... 27 0 1 1.00 1 0 1
.................................................................TGGCCGCGTATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
..................................................................GGCAGTGTATTGTTACCTGGT........................................................................................................ 21 1 1 1.00 1 1 0
.............................................................TCGGTGGCAGTGTATTGTTAGCTGG......................................................................................................... 25 2 1 1.00 1 0 1
.................................................................TGGCAGTGGATTGTTAGCTGGTT....................................................................................................... 23 1 1 1.00 1 1 0
.................................................................TGGCAGTGTCTTGTTAGCTGGC........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................GGGCAGTGTATTGTTAGCTGGTT....................................................................................................... 23 1 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGGTATAA.................................................................................................... 26 2 1 1.00 1 0 1
..........................................................GATGTCCTGGCAGTGTATTGTTAGCTG.......................................................................................................... 27 3 1 1.00 1 0 1
................................................................ATGGCAGTGTATTGTTAGCTGGTAGT..................................................................................................... 26 3 1 1.00 1 0 1
.................................................................TGGCAGAGTATTGTTAGCTGGTATA..................................................................................................... 25 3 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAGTT.................................................................................................... 26 3 1 1.00 1 0 1
....................................................................CAGTGTATTGTTAGCTGGTT....................................................................................................... 20 0 1 1.00 1 1 0
....................................................................CAGCGTATTGTTAGCTGGT........................................................................................................ 19 1 1 1.00 1 1 0
..................................................................GGCAGTGTATTGTTAGCTGT......................................................................................................... 20 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTATTAGCTGGT........................................................................................................ 22 1 2 1.00 2 2 0
.................................................................TGGCAGTGTATTGTTATCTGGC........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TTGTAGTGTATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCAGTGTTTTGTTAGCTGGTA....................................................................................................... 23 2 1 1.00 1 1 0
.................................................................TGGCGGGGTATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
..................................................................GGCAGTGTATTGTTAG............................................................................................................. 16 0 2 1.00 2 0 2
...................................................................GCAGTGTATTGCTAGCTGGT........................................................................................................ 20 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGTTGGTT....................................................................................................... 23 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGGTTCT..................................................................................................... 25 2 1 1.00 1 0 1
................................................................ATGGCAGTGTATTGTTAGCTGT......................................................................................................... 22 2 1 1.00 1 1 0
...............................................................................................................................TTATTGCATTTACAATGGACGTCAGATG.................................... 28 0 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGGTTTT..................................................................................................... 25 2 1 1.00 1 1 0
.................................................................TGGCCGTGTATTGTTAGCTGGAT....................................................................................................... 23 2 1 1.00 1 1 0
................................................................ATGGCAGTGGATTGTTAGCTGGT........................................................................................................ 23 2 1 1.00 1 1 0
.................................................................TAGCAGTGTATTGTTAGCTGGTT....................................................................................................... 23 1 1 1.00 1 1 0
.................................................................TGGCAGGGTATTGTTAGCT........................................................................................................... 19 1 1 1.00 1 1 0
........................................................................................................TCAGCTAACATACAACTGCTA.................................................................. 21 0 1 1.00 1 0 1
................................................................ATGGCAGTGTACTGTTAGCTGGTT....................................................................................................... 24 2 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGCTTGC..................................................................................................... 25 2 1 1.00 1 1 0
................................................................ATGGCAGTGTATTGTTAGCTGGTAAA..................................................................................................... 26 3 1 1.00 1 0 1
.................................................................TGGCAGTGTATAGTTAGCTGGT........................................................................................................ 22 1 1 1.00 1 1 0
.................................................................TGGCAGTGAATTGTTAGCTGGG........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCTGTGTATTGTTAGCTGGTT....................................................................................................... 23 1 1 1.00 1 1 0
..................................................................GGCTGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 1.00 1 1 0
.................................................................TGGCTGTGTATTGTTACCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
..................................................................GGTAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGGTTTAAT................................................................................................... 27 1 1 1.00 1 1 0
................................................................ATGGCGGTGTATTGTTAGCTGGT........................................................................................................ 23 2 1 1.00 1 1 0
................................................................ATGGCAGTGTATTGTTAGCTGTT........................................................................................................ 23 2 1 1.00 1 1 0
.................................................................TTGCAGTGTCTTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................CGGCAGTGTATTGTTAGCTGGTT....................................................................................................... 23 1 1 1.00 1 1 0
.................................................................TGGCCGTGTCTTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
.........................................................................................................CAGCTAACGTACAACTGCTAT................................................................. 21 1 1 1.00 1 1 0
.................................................................TGGCCGTGTATTGTTAGCTGGG........................................................................................................ 22 2 1 1.00 1 1 0
...............................................TACCGGTGTGTGATGAGG.............................................................................................................................. 18 0 1 1.00 1 1 0
.................................................................TGGCGGTGTATTGTTAGCTGGG........................................................................................................ 22 2 1 1.00 1 1 0
.............................................................GGAATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 26 3 1 1.00 1 0 1
.................................................................TGGCAGTGGATTGTTAGCT........................................................................................................... 19 1 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGAA........................................................................................................ 22 2 3 1.00 3 3 0
..................................................................CGCAGTGTATTGTTAGCTGGT........................................................................................................ 21 1 1 1.00 1 1 0
............................................................TCGGATGGCAGTGTATTGTTAGCTGG......................................................................................................... 26 3 1 1.00 1 0 1
.................................................................TGGCCGTGTATTGTTAGCTGG......................................................................................................... 21 1 1 1.00 1 1 0
.................................................................TGGCAGCGAATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
..................................................................GGCAGTGTATGGTTAGCTGGT........................................................................................................ 21 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGATTGC..................................................................................................... 25 2 2 1.00 2 2 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAAAA.................................................................................................... 26 2 1 1.00 1 0 1
.................................................................TGGCAGCGTATTGTTAGCTTGT........................................................................................................ 22 2 1 1.00 1 1 0
................................................................ATGGCAGTGTATTGTTAGCTGGA........................................................................................................ 23 2 2 1.00 2 2 0
.................................................................GGGCAGTGGATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
................................................................ATGGCAGTGCATTGTTAGCTGGT........................................................................................................ 23 2 1 1.00 1 1 0
..................................................................GGCAGTGTATTGTTAGCTGGTAG...................................................................................................... 23 1 1 1.00 1 0 1
.........................................................................................................CAGCTACCATACAACTGCTAT................................................................. 21 1 1 1.00 1 1 0
.................................................................................................................................ATTGCATTTACAATGGACGTCAGA...................................... 24 0 1 1.00 1 0 1
..................................................................GGCAGTATATTGTTAGCTGGT........................................................................................................ 21 1 1 1.00 1 1 0
.................................................................TGGCAGTGGATTGTTAGCTGGG........................................................................................................ 22 2 1 1.00 1 1 0
...............................................................................................................................TTATTGCATTTACAATGGACGTCAGATGGT.................................. 30 0 1 1.00 1 0 1
...................................................................................................................................TGCATTTACAATGGACGTCAGATGGTAATTT............................. 31 0 1 1.00 1 0 1
........................................................................................................................TGCTATCTTATTGCATTTACAATGG.............................................. 25 0 1 1.00 1 0 1
.................................................................TGGCGGTGTATTGTTAGCTGGC........................................................................................................ 22 2 1 1.00 1 1 0
.........................................................................................................CAGCTAACATACAGCTGCTAT................................................................. 21 1 1 1.00 1 1 0
.................................................................TGGCAGTGGATTGTTAGCTG.......................................................................................................... 20 1 1 1.00 1 0 1
................................................................ATGGCAGTGTATTTTTAGCTGGT........................................................................................................ 23 2 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGATAGCTGGT........................................................................................................ 22 1 1 1.00 1 1 0
...................................................................GCAGTGTATTGTTAGCTGGTA....................................................................................................... 21 1 1 1.00 1 1 0
...............................................................AATGGCAGTGTATTGTTAGCTGG......................................................................................................... 23 2 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGGTATA..................................................................................................... 25 2 1 1.00 1 0 1
..................................................................GGCAGTGTATTGTTAGCTGAT........................................................................................................ 21 1 1 1.00 1 1 0
...........................................................ATCGGATGGCAGTGTATTGTTAGCTGG......................................................................................................... 27 3 1 1.00 1 0 1
................................................................ATGGCAGTGGATTGTTAGCTG.......................................................................................................... 21 2 2 1.00 2 0 2
..............................................................CTTTGGCAGTGTATTGTTAGCTGGT........................................................................................................ 25 3 1 1.00 1 1 0
.................................................................TGGCAGGGTATTGTTAGCTGGTA....................................................................................................... 23 2 1 1.00 1 1 0
...................................................................GCAGTGTATTGTTAGCTG.......................................................................................................... 18 0 1 1.00 1 1 0
...................................................................GCAGTGTATTGTTAGCTGGTT....................................................................................................... 21 0 1 1.00 1 1 0
...............................................................GATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 24 1 1 1.00 1 0 1
.................................................................TGGGAGAGTATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCCGGC........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTCGC........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCCGTGTATTGTTAGCTGGTAGT..................................................................................................... 25 3 1 1.00 1 1 0
.................................................................TGGCAGTGCATTGTTAGCTGGTT....................................................................................................... 23 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGGTAAAT.................................................................................................... 26 3 1 1.00 1 1 0
..............................................................GAATGGCAGTGTATTGTTAGCTGG......................................................................................................... 24 3 2 1.00 2 0 2
...........................................................ATCGGATGGCAGTGTATTGTTAGCTGGT........................................................................................................ 28 3 1 1.00 1 0 1
...................................................................................................................................TGCATTTACAATGGACGTCAGATG.................................... 24 0 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCCGGG........................................................................................................ 22 2 1 1.00 1 1 0
...................................................................GCAGTGTATTGTTAGCTGGG........................................................................................................ 20 1 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGGTGAAT.................................................................................................... 26 3 1 1.00 1 1 0
.................................................................TGGCAGTGTCTTGTTAGCTGGG........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCAGCGTATTGTTAGCTGGTAA...................................................................................................... 24 3 1 1.00 1 1 0
................................................................ATGGCAGAGTATTGTTAGCTGGT........................................................................................................ 23 2 2 1.00 2 2 0
..................................................................TGCAGTGTATTGTTAGCTGGTA....................................................................................................... 22 2 1 1.00 1 0 1
..................................................................GGCAGGGTATTGTTAGCTGGTT....................................................................................................... 22 1 1 1.00 1 1 0
..................................................................GGCAGTGTATTGTTAGCGGGT........................................................................................................ 21 1 1 1.00 1 1 0
................................................................ATGGCAGTGTATTGTTAGCTGGTAA...................................................................................................... 25 3 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGGTTTAT.................................................................................................... 26 2 1 1.00 1 0 1
..................................................................GGCCGTGTATTGTTAGCTGGC........................................................................................................ 21 2 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCTGGTTATT.................................................................................................... 26 3 1 1.00 1 0 1
.................................................................TGGCAGTGTAATGTTAGCTGGT........................................................................................................ 22 1 1 1.00 1 1 0
.................................................................TGGCGGTGGATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCCGTGGATTGTTAGCTGGT........................................................................................................ 22 2 1 1.00 1 1 0
.................................................................TGGCAGTGTATTGTTAGCGGT......................................................................................................... 21 2 1 1.00 1 1 0
.................................................................TGGCCGTGTATTGTTAGCTG.......................................................................................................... 20 1 1 1.00 1 0 1
..................................................................GGCCGTGTATTGTTAGCTG.......................................................................................................... 19 1 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGGTTTTTTA.................................................................................................. 28 3 1 1.00 1 0 1
.................................................................TGGCAGTGTATTGTTAGCTGGTCGT..................................................................................................... 25 2 1 1.00 1 1 0

Anti-sense strand reads

CGGTGAACGGAGACCGATTTAACGAGAACGAGTACTTCACGGGAACAATGGCCACACACTACTCCACCGTCACATAACAATCGACCAACTTATACACACACTATAGTCGATTGTATGTTGACGATAGAATAACGTAAATGTTACCTGCAGTCTACCATTAAACTAAACGTTAAAGACACATATACATACAC
**************************************************....((((((((((((((((((((((.((((((((((...(((....)))...)))))))))))))).)))))))))))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:29 AM