ID:

ocu-mir-378a

Coordinate:

chr3:31535181-31535246 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-49.7	-49.5	-49.2

mature

star

Sense Strand Reads

GGTGAGCGGCTTGTCCAGGACCACGCAGCCAGCGGGTGACAGAGCCACCCAGGGCTCCTGACTCCAGGTCCTGTGTGTTACCTCGAAATAGCACTGGACTTGGAGTCAGAAGGCCTGAGTGGAGTCGTCTAACCCACTCTCTGGCTGGGTGACCCCGAGCTAGCCA *************************************..((.((((.((((.((.((((((((((((((...((((((........)))))).)))))))))))))).)).)))).))))..))...***********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
............................................................................................ACTGGACTTGGAGTCAGAAGGC....................................................	22	0	2	11.50	23	17	6
......................................................CTCCTGACTCCAGGTCCTGTGT..........................................................................................	22	0	1	7.00	7	7	0
............................................................................................ACTGGACTTGGAGTCAGAAGG.....................................................	21	0	3	3.00	9	0	9
............................................................................................ACTGGACTTGGAGTCAGAAGGCC...................................................	23	0	1	3.00	3	3	0
............................................................................................ACTGGACTTGGAGTCAGAAG......................................................	20	0	6	2.33	14	7	7
............................................................................................ACTGGACTTGGAGTCAGAAGGCA...................................................	23	1	2	1.50	3	2	1
............................................................................................ACTGGACTTGGAGTCGGAAGGC....................................................	22	1	2	1.00	2	2	0
............................................................................................ACTGGACTCGGAGTCAGAAGG.....................................................	21	1	6	0.17	1	0	1
............................................................................................ACTGGACTTGGAGTCAGAA.......................................................	19	0	7	0.14	1	0	1
............................................................................................ACTGGACTTGGAGTCAGA........................................................	18	0	10	0.10	1	1	0

Anti-sense strand reads

CCACTCGCCGAACAGGTCCTGGTGCGTCGGTCGCCCACTGTCTCGGTGGGTCCCGAGGACTGAGGTCCAGGACACACAATGGAGCTTTATCGTGACCTGAACCTCAGTCTTCCGGACTCACCTCAGCAGATTGGGTGAGAGACCGACCCACTGGGGCTCGATCGGT ***********************************..((.((((.((((.((.((((((((((((((...((((((........)))))).)))))))))))))).)).)))).))))..))...*************************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 05/16/2015 at 12:43 AM