ID:

ocu-mir-375

Coordinate:

chr7:160243022-160243085 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

AGCCAGGAGACCAGCGAGGGCACCGCCAGGCCCCGGGCCGCCCGCTCCCGCCCCGCGACGAGCCCCTCGCACAAACCGGACCTGAGCGTTTTGTTCGTTCGGCTCGCGTGAGGCAGGGGCGGCCTCTCAGCACCCGCCCGGGGAGAGGGCCCGGTCCCGTCGCC
***********************************((((((((.((...(((.((((.((((((...((.(((((.((........)).))))).))...)))))))))).))))))))))))).....***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
GSM1528821
Adult_testes_Mili_IP
.........................................................................................TTTGTTCGTTCGGCTCGCGTGA..................................................... 22 0 1 24.00 24 22 2
.........................................................................................TTTGTTCGTTCGGCTCGCGTGAA.................................................... 23 1 1 4.00 4 3 1
.........................................................................................TTTGTTCGTTCGGCTCGCGT....................................................... 20 0 1 4.00 4 2 2
............................................................................................GTTCGTTCGGCTCGCGTGAT.................................................... 20 1 1 2.00 2 2 0
............................................................................................GTTCGTTCGGCTCGCGTGT..................................................... 19 1 1 2.00 2 2 0
............................................................................................GTTCGTTCGGCTCGCGTGA..................................................... 19 0 1 2.00 2 2 0
..........................................................................................TTGTTCGTTCGGCTCGCGT....................................................... 19 0 1 1.00 1 0 1
.........................................................................................TTTGTTCGTTCGGCTCGCGTG...................................................... 21 0 1 1.00 1 1 0
.........................................................................................TTTGTTCGTTCGGCTCGCGTGAAAA.................................................. 25 3 1 1.00 1 0 1
........................................................................................TTTTGTTCGTTCGGCTCGCGTTT..................................................... 23 2 1 1.00 1 1 0
.........................................................................................TTTGTTCGTTCGGCTCGCGTGAAA................................................... 24 2 1 1.00 1 0 1
.........................................................................................TTTGTTCGTTCGGCTCGCGTGAAT................................................... 24 2 1 1.00 1 1 0
.........................................................................................TTTGTTCGTTCGGCTCGCGCGAA.................................................... 23 2 1 1.00 1 0 1
.........................................................................................TTTGTTCGTTCGGCTCGCGTGAGAA.................................................. 25 2 1 1.00 1 1 0
...............................................................................................CGTTCGGCTCGCGTGAT.................................................... 17 1 1 1.00 1 1 0

Anti-sense strand reads

TCGGTCCTCTGGTCGCTCCCGTGGCGGTCCGGGGCCCGGCGGGCGAGGGCGGGGCGCTGCTCGGGGAGCGTGTTTGGCCTGGACTCGCAAAACAAGCAAGCCGAGCGCACTCCGTCCCCGCCGGAGAGTCGTGGGCGGGCCCCTCTCCCGGGCCAGGGCAGCGG
***********************************((((((((.((...(((.((((.((((((...((.(((((.((........)).))))).))...)))))))))).))))))))))))).....***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:48 AM