ID:

ocu-mir-374c

Coordinate:

chrUn0059:1593276-1593324 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-35.4

mature

star

Sense Strand Reads

GCCCTTAAGGAATTTAGTCTAGCAGACGGAGAACCATAGACTCGGACAATGATAATACAACCTGCTAAGTGCTAGGACACTTAGCAGGTTGTATTATATCCATCCAAGTAGGATTTCTTCAGAGGAGCACCATTCCAAGTTGCTGCTGG *********************************....(((.(((.....((((((((((((((((((((......)))))))))))))))))))).....))).))).....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
...................................................ATAATACAACCTGCTAAG................................................................................	18	0	2	0.50	1	1	0
......................................................ATACAACCTGCTAAGT...............................................................................	16	0	4	0.25	1	0	1

Anti-sense strand reads

CGGGAATTCCTTAAATCAGATCGTCTGCCTCTTGGTATCTGAGCCTGTTACTATTATGTTGGACGATTCACGATCCTGTGAATCGTCCAACATAATATAGGTAGGTTCATCCTAAAGAAGTCTCCTCGTGGTAAGGTTCAACGACGACC *********************************....(((.(((.....((((((((((((((((((((......)))))))))))))))))))).....))).))).....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
..............................................................................TGAATCGTCCAACATAATATA..................................................	21	0	1	25.00	25	24	1
...............................................................................GAATCGTCCAACATAATATA..................................................	20	0	1	24.00	24	22	2
................................................................................AATCGTCCAACATAATATA..................................................	19	0	1	10.00	10	7	3
............................................................................AGTGAATCGTCCAACATAATATA..................................................	23	1	1	2.00	2	2	0
..............................................................................GGAATCGTCCAACATAATATA..................................................	21	1	1	1.00	1	1	0
..............................................................................TGAATCGTCCAACATAATAT...................................................	20	0	1	1.00	1	1	0
..............................................................................TGAATCGTCCAACATAATATAA.................................................	22	1	1	1.00	1	0	1
...............................................................................GAATCGTCCAACATAATA....................................................	18	0	2	0.50	1	1	0
..............................................................................TGAATCGTCCAACATA.......................................................	16	0	4	0.25	1	0	1

Generated: 05/16/2015 at 12:54 AM