ID:

ocu-mir-362

 Coordinate:

chrX:34238023-34238087 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.2 -37.1

Sense Strand Reads

CACACACACACATGAAGGGCAGGTGCCTGAGCCTTTTTTCTGCTCCTCCTCTCAAATCCTTGGCACCTAGGTGTGAGTGCTGTTTCAGTGCAACACACCTATTCAAGGATTCAAAGAGGCTGAGCCTTGTCTACGTATGTAAGGACTGTGCACCTGAACATCACC
***************************************..((((..(((((..(((((((((....((((((((.((((((...))))))..)))))))).)))))))))...)))))..))))**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
......................................................AATCCTTGGAACCTAGGTGT........................................................................................... 20 1 1 10.00 10 10 0
......................................................AATCCTTGGCACCTAGGTGTGAGT....................................................................................... 24 0 1 9.00 9 4 5
......................................................AATCCTTGGCACCTAGGTGTGA......................................................................................... 22 0 1 9.00 9 1 8
......................................................AATCCTTGGCACCTAGGTGTGAG........................................................................................ 23 0 1 6.00 6 4 2
......................................................AATCCTTGGAACCTAGGTG............................................................................................ 19 1 1 5.00 5 5 0
..........................................................CTTGGCACCTAGGTGTGAG........................................................................................ 19 0 1 3.00 3 3 0
.........................................................CCTTGGCACCTAGGTGTGAGT....................................................................................... 21 0 1 3.00 3 3 0
......................................................AATCCTTGGCACCTAGGTGT........................................................................................... 20 0 1 2.00 2 1 1
......................................................AATCCTTGGCACCTAGGTGTGAGTGC..................................................................................... 26 0 1 2.00 2 2 0
...........................................................................................AACACACCTATTCAAGGAT....................................................... 19 0 1 2.00 2 0 2
...........................................................................................AACACACCTGTTCAAGGATTCA.................................................... 22 1 1 2.00 2 2 0
...............................................CCATACAAATCCTTGGCACCTAGGTGTGA......................................................................................... 29 3 1 1.00 1 0 1
.........................................................CCTTGGCACCTAGGTGTGAT........................................................................................ 20 1 1 1.00 1 1 0
...........................................................................................AACACACCTATTCAAGGA........................................................ 18 0 1 1.00 1 1 0
..........................................................................................AAACACACCTATTCAAGGAT....................................................... 20 1 1 1.00 1 0 1
...........................................................................................AACACACCTATTCAAGGATT...................................................... 20 0 1 1.00 1 0 1
...........................................................................................AACACACCTATTCAAGG......................................................... 17 0 1 1.00 1 1 0

Anti-sense strand reads

GTGTGTGTGTGTACTTCCCGTCCACGGACTCGGAAAAAAGACGAGGAGGAGAGTTTAGGAACCGTGGATCCACACTCACGACAAAGTCACGTTGTGTGGATAAGTTCCTAAGTTTCTCCGACTCGGAACAGATGCATACATTCCTGACACGTGGACTTGTAGTGG
****************************************..((((..(((((..(((((((((....((((((((.((((((...))))))..)))))))).)))))))))...)))))..))))*************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 01:01 AM