ID:

ocu-mir-34c

 Coordinate:

chr1:104894050-104894126 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.2 -29.1 -28.8

Sense Strand Reads

GCCTATCACAAGGAATGGTGGCACCAACTTGAGACCAGAGTTTTCCCGTGAGTCTAGTTACTAGGCAGTGTAGTTAGCTGATTGCTGATAGTACCAATCACTAACCACACGGCCAGGTAAAAAGATTTGAGTGTTCATCCAGATGTGTTGCCTGGGCAACATGAGCGCGTTTCAGGA
***********************************************..((((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))))).....******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
..............................................................AGGCAGTGTAGTTAGCTGATTGC............................................................................................ 23 0 1 8379.00 8379 8277 102
..............................................................AGGCAGTGTAGTTAGCTGATT.............................................................................................. 21 0 1 1791.00 1791 762 1029
..............................................................AGGCAGTGTAGTTAGCTGATTG............................................................................................. 22 0 1 778.00 778 516 262
..............................................................AGGCAGTGTAGTTAGCTGAT............................................................................................... 20 0 1 589.00 589 528 61
..............................................................AGGCAGTGTAGTTAGCTGATTGCA........................................................................................... 24 1 1 233.00 233 226 7
..............................................................AGGCAGTGTAGTTAGCTGATTGCT........................................................................................... 24 0 1 225.00 225 211 14
..............................................................AGGCAGTGTAGTTAGCTGATTGA............................................................................................ 23 1 1 201.00 201 179 22
..............................................................AGGCAGTGTAGTTAGCTGATTGT............................................................................................ 23 1 2 167.00 334 332 2
...............................................................GGCAGTGTAGTTAGCTGATTGC............................................................................................ 22 0 1 148.00 148 148 0
.............................................................AAGGCAGTGTAGTTAGCTGATT.............................................................................................. 22 1 1 99.00 99 14 85
..............................................................AGGCAGTGTAGTTAGCTGA................................................................................................ 19 0 1 96.00 96 81 15
.............................................................AAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 24 1 1 51.00 51 49 2
................................................................GCAGTGTAGTTAGCTGATTGC............................................................................................ 21 0 1 45.00 45 45 0
...................................................................GTGTAGTTAGCTGATT.............................................................................................. 16 0 1 44.00 44 8 36
..............................................................AGGCAGTGTAGTTAGCT.................................................................................................. 17 0 1 39.00 39 38 1
..............................................................AGGCCGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 35.00 35 34 1
..............................................................AGGCAGTGTAGTTAGCTGATTGCTAA......................................................................................... 26 1 1 30.00 30 30 0
..............................................................AGGCAGGGTAGTTAGCTGATTGC............................................................................................ 23 1 1 29.00 29 29 0
...............................................................................................AATCACTAACCACACGGCCAGGT........................................................... 23 0 1 29.00 29 0 29
..............................................................AGGCAGTGTAGTTAGCTGATTGCTGAT........................................................................................ 27 0 1 28.00 28 28 0
...............................................................................................AATCACTAACCACACGGCCAGG............................................................ 22 0 1 24.00 24 10 14
..............................................................AGGCAGTGTAGTTAGCTGATTGCTT.......................................................................................... 25 1 1 23.00 23 22 1
..............................................................AGGCAGCGTAGTTAGCTGATTGC............................................................................................ 23 1 1 22.00 22 22 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAA.......................................................................................... 25 2 1 22.00 22 21 1
...............................................................GGCAGTGTAGTTAGCTGATT.............................................................................................. 20 0 1 21.00 21 4 17
..............................................................AGGCAGTGTAGTTAGCTGATTGCC........................................................................................... 24 1 1 21.00 21 21 0
...............................................................................................AATCACTAACCACACGGCCA.............................................................. 20 0 1 21.00 21 0 21
..............................................................AGGCAGTGTAGTTAGCTG................................................................................................. 18 0 1 20.00 20 14 6
...................................................................GTGTAGTTAGCTGATTGC............................................................................................ 18 0 1 19.00 19 14 5
..............................................................AGGCAGTGCAGTTAGCTGATTGC............................................................................................ 23 1 1 19.00 19 18 1
..............................................................AGGCAGTGTAGTTAGCTGATTT............................................................................................. 22 1 1 16.00 16 16 0
...............................................................GGCAGTGTAGTTAGCTGAT............................................................................................... 19 0 1 16.00 16 15 1
..............................................................AGGCAGTGTAGTTAGCTGATTGCTTT......................................................................................... 26 2 1 15.00 15 15 0
.............................................................AAGGCAGTGTAGTTAGCTGATTG............................................................................................. 23 1 1 15.00 15 2 13
..............................................................AGGCAGAGTAGTTAGCTGATTGC............................................................................................ 23 1 1 15.00 15 15 0
..............................................................AGGCAGTGGAGTTAGCTGATTGC............................................................................................ 23 1 1 14.00 14 13 1
..............................................................AGGCAGTTTAGTTAGCTGATTGC............................................................................................ 23 1 1 14.00 14 14 0
...............................................................GGCAGTGTAGTTAGCTGATTGCT........................................................................................... 23 0 1 13.00 13 12 1
..............................................................AGGCAGGGTAGTTAGCTGATT.............................................................................................. 21 1 1 12.00 12 2 10
.....................................................................................TGATAGTACCAATCACTAACCACACGG................................................................. 27 0 1 12.00 12 0 12
...........................................................GAAAGGCAGTGTAGTTAGCTGATT.............................................................................................. 24 3 2 11.50 23 0 23
..............................................................AGGCAGTGTAGTTAGCTGATTGCTAT......................................................................................... 26 2 1 11.00 11 11 0
..............................................................AGGCCGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 11.00 11 4 7
..............................................................AGGCAGTGTAGTTAGCTGATTGAT........................................................................................... 24 1 1 11.00 11 11 0
..............................................................AGGCAGTGTAATTAGCTGATTGC............................................................................................ 23 1 2 11.00 22 22 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAT.......................................................................................... 25 2 1 10.00 10 10 0
.................................................................CAGTGTAGTTAGCTGATTGC............................................................................................ 20 0 1 10.00 10 6 4
...............................................................................................AATCACTAACCACACGGCCAG............................................................. 21 0 1 10.00 10 1 9
..............................................................AGGCAGTGTAGTTAGCTGATTAA............................................................................................ 23 2 1 10.00 10 9 1
..............................................................AGGCAGTGTAGTTAGCTGATTA............................................................................................. 22 1 1 9.00 9 8 1
...........................................................GAAAGGCAGTGTAGTTAGCTGATTG............................................................................................. 25 3 1 9.00 9 0 9
..............................................................AGGCAGAGTAGTTAGCTGATT.............................................................................................. 21 1 1 9.00 9 4 5
.................................................................CAGTGTAGTTAGCTGATT.............................................................................................. 18 0 1 9.00 9 6 3
..................................................................AGTGTAGTTAGCTGATT.............................................................................................. 17 0 1 9.00 9 2 7
..............................................................AGGCAGTGTGGTTAGCTGATTGC............................................................................................ 23 1 1 9.00 9 8 1
..............................................................AGGCAGTGTAGTTAGCTGATTGCTA.......................................................................................... 25 1 1 9.00 9 8 1
.............................................................AAGGCAGTGTAGTTAGCTGATTGA............................................................................................ 24 2 1 9.00 9 9 0
...............................................................................................AATCACTAACCACACGGCCAGGA........................................................... 23 1 1 8.00 8 1 7
.....................................................................GTAGTTAGCTGATTGC............................................................................................ 16 0 1 8.00 8 8 0
..............................................................AGGCTGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 8.00 8 8 0
..............................................................AGGCGGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 8.00 8 8 0
..............................................................AGGCAGTGTAGTTATCTGATTGC............................................................................................ 23 1 1 8.00 8 8 0
..............................................................AGGCAGTGTAGTTAGCTGATTGAA........................................................................................... 24 2 2 7.00 14 13 1
..............................................................AGGCAGTCTAGTTAGCTGATTGC............................................................................................ 23 1 1 7.00 7 7 0
..................................................................AGTGTAGTTAGCTGATTG............................................................................................. 18 0 1 7.00 7 5 2
...............................................................GGCAGTGTAGTTAGCTGATTG............................................................................................. 21 0 1 7.00 7 5 2
..............................................................AGGCAGTGAAGTTAGCTGATTGC............................................................................................ 23 1 1 7.00 7 7 0
..............................................................AGGCAGTGTGGTTAGCTGATT.............................................................................................. 21 1 1 6.00 6 1 5
...............................................................................................AATCACTAACCACACGGCCAGGAA.......................................................... 24 1 1 6.00 6 6 0
...................................................................GTGTAGTTAGCTGATTG............................................................................................. 17 0 1 6.00 6 0 6
...............................................................................................AATCACTAACCACACGGCCAGT............................................................ 22 1 1 6.00 6 0 6
..............................................................AGGCAGTGTAGTTAGCTGATTAC............................................................................................ 23 1 1 6.00 6 6 0
..............................................................ATGCAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 6.00 6 6 0
............................................................AAAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 25 2 1 6.00 6 6 0
..............................................................AGGTAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 6.00 6 6 0
...............................................................GGCAGTGTAGTTAGCTGATTGCA........................................................................................... 23 1 1 6.00 6 6 0
..............................................................AGGCAGTGTAGTTAGTTGATTGC............................................................................................ 23 1 1 6.00 6 6 0
.............................................................TAGGCAGTGTAGTTAGCTGAT............................................................................................... 21 0 1 6.00 6 5 1
................................................................GCAGTGTAGTTAGCTGATTGT............................................................................................ 21 1 2 5.50 11 11 0
................................................................................................ATCACTAACCACACGGCCAGG............................................................ 21 0 1 5.00 5 2 3
.............................................................TAGGCAGTGTAGTTAGCTGATT.............................................................................................. 22 0 1 5.00 5 4 1
................................................................................................ATCACTAACCACACGGCCAG............................................................. 20 0 1 5.00 5 2 3
..............................................................AGGCAGTGTCGTTAGCTGATTGC............................................................................................ 23 1 1 5.00 5 5 0
..............................................................TGGCAGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 5.00 5 1 4
................................................................GCAGTGTAGTTAGCTGATT.............................................................................................. 19 0 1 5.00 5 5 0
..............................................................AGGCAGTGTAGTTAGCTGATTGTT........................................................................................... 24 1 1 5.00 5 5 0
..............................................................AGGCAGTGTAATTAGCTGATTGAT........................................................................................... 24 2 2 5.00 10 10 0
...............................................................................................AATCACTAACCACACGGCC............................................................... 19 0 1 5.00 5 0 5
................................................................GCAGTGTAGTTAGCTGATTG............................................................................................. 20 0 1 5.00 5 3 2
.............................................................TAGGCAGTGTAGTTAGCTGATTG............................................................................................. 23 0 1 5.00 5 1 4
..............................................................ATGCAGTGTAGTTAGCTGATTGT............................................................................................ 23 2 2 4.50 9 9 0
.............................................................AAGGCAGTGTAGTTAGCTGAT............................................................................................... 21 1 1 4.00 4 3 1
..............................................................AGGAAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 4.00 4 4 0
..............................................................AGGCAGTGTAGTTAGCCGATTGC............................................................................................ 23 1 1 4.00 4 4 0
..............................................................AGGCAGTGTAGTCAGCTGATTGC............................................................................................ 23 1 1 4.00 4 3 1
...............................................................................................AATCACTAACCACACGGCCAGGTTT......................................................... 25 2 1 4.00 4 0 4
............................................................AAAGGCAGTGTAGTTAGCTGATT.............................................................................................. 23 2 1 4.00 4 0 4
..............................................................AGGCAGTGTAGTTAGCTGATA.............................................................................................. 21 1 1 4.00 4 4 0
..............................................................AGGCAGTGTAGTTAGCTGATTCC............................................................................................ 23 1 1 4.00 4 4 0
...............................................................................................AATCACTAACCACACGGCCAGGTA.......................................................... 24 0 1 4.00 4 0 4
..............................................................AGGCAGTGTAGTTAGCTTATTGC............................................................................................ 23 1 1 4.00 4 4 0
...........................................................GAAAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 26 3 1 4.00 4 0 4
..............................................................AGGCAGTGTAGTTAGCTGACTGC............................................................................................ 23 1 1 4.00 4 4 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCCT.......................................................................................... 25 2 1 4.00 4 4 0
...............................................................GGCAGTGTAGTTAGCTGATTGCAT.......................................................................................... 24 2 1 4.00 4 4 0
............................................................AAAGGCAGTGTAGTTAGCTGATTG............................................................................................. 24 2 1 4.00 4 4 0
.....................................................................................TGATAGTACCAATCACTAACCACACGGC................................................................ 28 0 1 4.00 4 0 4
.............................................................AAGGCAGTGTAGTTAGCTGATTGCTCGTA....................................................................................... 29 3 1 4.00 4 0 4
..............................................................AGGCACTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 3.00 3 3 0
...............................................................GGCAGTGTAGTTAGCTGATTGCC........................................................................................... 23 1 1 3.00 3 3 0
................................................................GCAGTGTAGTTAGCTGAT............................................................................................... 18 0 1 3.00 3 3 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCTGA......................................................................................... 26 0 1 3.00 3 3 0
..............................................................AGGCAGGGTAGTTAGCTGATTG............................................................................................. 22 1 1 3.00 3 2 1
...............................................................GGCAGTGTAGTTAGCTGA................................................................................................ 18 0 1 3.00 3 2 1
..............................................................AGGCAGTGTAGGTAGCTGATTGC............................................................................................ 23 1 1 3.00 3 3 0
.............................................................AAGGCAGTGTAGTTAGTTGATTGC............................................................................................ 24 2 1 3.00 3 3 0
..............................................................AGGCAGGGTAGTTAGCTGATTGCT........................................................................................... 24 1 1 3.00 3 3 0
..............................................................AGGCAGCGTAGTTAGCTGATT.............................................................................................. 21 1 1 3.00 3 0 3
..............................................................AGGCGGTGTAGTTAGCTGATTG............................................................................................. 22 1 1 3.00 3 1 2
..............................................................AGGCAGTGTAGTTAGCTGATC.............................................................................................. 21 1 1 3.00 3 2 1
..............................................................AGGCAGTGTAGCTAGCTGATTGC............................................................................................ 23 1 1 3.00 3 3 0
..............................................................AGTCAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 3.00 3 3 0
..............................................................AGGCAGTGTAGTTCGCTGATTGC............................................................................................ 23 1 1 3.00 3 3 0
.................................................................CAGTGTAGTTAGCTGAT............................................................................................... 17 0 1 3.00 3 3 0
..............................................................AGCCAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 3.00 3 3 0
.............................................................GAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 24 1 1 3.00 3 3 0
..............................................................AGGCAGTGCAGTTAGCTGATT.............................................................................................. 21 1 2 2.50 5 1 4
..............................................................AGGCAGTGAAGTTAGCTGATT.............................................................................................. 21 1 2 2.00 4 1 3
..............................................................AGGCAGTGTAGTTAGCTGATTGG............................................................................................ 23 1 1 2.00 2 2 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAATT........................................................................................ 27 3 1 2.00 2 0 2
..............................................................AGGCAGTGTAGTTACCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
.....................................................................................TGATAGTACCAATCACTAACCACAC................................................................... 25 0 1 2.00 2 0 2
..............................................................AGGCCGTGTAGTTAGCTGATTG............................................................................................. 22 1 1 2.00 2 2 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAC.......................................................................................... 25 2 2 2.00 4 4 0
..............................................................AGGCCGTGTAGTTAGCTGATTGCT........................................................................................... 24 1 1 2.00 2 2 0
..............................................................AGGCAGTGTAGTTAGCTGAC............................................................................................... 20 1 1 2.00 2 2 0
.............................................................AAGGCAGAGTAGTTAGCTGATT.............................................................................................. 22 2 1 2.00 2 0 2
..............................................................AGGCAGTGTAGGTAGCTGATT.............................................................................................. 21 1 1 2.00 2 0 2
..................................................................AGTGTAGTTAGCTGATTGCA........................................................................................... 20 1 1 2.00 2 1 1
........................................................ATCCCTAGGCAGTGTAGTTAGCTGATT.............................................................................................. 27 3 1 2.00 2 0 2
..............................................................AGGCAGTGTAGATAGCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
..............................................................AGGCAGTGTTGTTAGCTGATT.............................................................................................. 21 1 1 2.00 2 1 1
..............................................................GGGCAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
...............................................................GGCCGTGTAGTTAGCTGATTGC............................................................................................ 22 1 1 2.00 2 2 0
...................................................................GTGTAGTTAGCTGATTGCT........................................................................................... 19 0 1 2.00 2 0 2
..............................................................AGGCAGAGTAGTTAGCTGAT............................................................................................... 20 1 1 2.00 2 2 0
..............................................................AGGCAGTGTAGTTAGCTGT................................................................................................ 19 1 1 2.00 2 2 0
..............................................................AGGCTGTGTAGTTAGCTGATTG............................................................................................. 22 1 1 2.00 2 1 1
...............................................................GGCAGTGTAGTTAGCTGATTGA............................................................................................ 22 1 1 2.00 2 2 0
...........................................................AAAAGGCAGTGTAGTTAGCTGATTGCA........................................................................................... 27 3 1 2.00 2 2 0
..............................................................AGGCAGTGGAGTTAGCTGATT.............................................................................................. 21 1 1 2.00 2 1 1
..............................................................AGCCAGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 2.00 2 1 1
...............................................................GGCAGTGGAGTTAGCTGATTGC............................................................................................ 22 1 1 2.00 2 2 0
..............................................................AGGCAGTGTAGTTAGCTCATTGC............................................................................................ 23 1 1 2.00 2 2 0
..............................................................AGGCAGTGTAGTTAGGTGATT.............................................................................................. 21 1 1 2.00 2 0 2
.................................................................CAGTGTAGTTAGCTGATTGCTT.......................................................................................... 22 1 1 2.00 2 2 0
.............................................................TAGGCAGTGTAGTTAGCTGATTT............................................................................................. 23 1 1 2.00 2 0 2
.................................................................CAGTGTAGTTAGCTGATTG............................................................................................. 19 0 1 2.00 2 1 1
..............................................................AGGCCGTGTAGTTAGCTGAT............................................................................................... 20 1 1 2.00 2 2 0
..............................................................AGGCAGAGTAGTTAGCTGATTG............................................................................................. 22 1 1 2.00 2 1 1
..............................................................AGGCAATGTAGTTAGCTGATT.............................................................................................. 21 1 1 2.00 2 2 0
..............................................................AGGCAATGTAGTTAGCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
..............................................................CGGCAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
..............................................................AGGCAGTGTTGTTAGCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
.............................................................TAGGCAGTGTAGTTAGCTGA................................................................................................ 20 0 1 2.00 2 0 2
..............................................................AGGCAGTGTAGTTAGATGAT............................................................................................... 20 1 1 2.00 2 1 1
..............................................................AGGCAGTGTAGTTAGCTGATTTCGTA......................................................................................... 26 3 1 2.00 2 0 2
..........................................................AAAAAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 27 3 1 2.00 2 2 0
..............................................................AGACAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 2.00 2 2 0
...............................................................GGCAGTGTAGTTAGCTGATTGT............................................................................................ 22 1 2 1.50 3 3 0
..............................................................AGGCAGTGTAGTCAGCTGAT............................................................................................... 20 1 2 1.50 3 3 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAAT......................................................................................... 26 3 2 1.50 3 3 0
..............................................................AAGCAGTGTAGTTAGCTGATTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCATTGTAGTTAGATGATTGC............................................................................................ 23 2 1 1.00 1 1 0
..............................................................AGGCAGTGGAGTTAGCTGATTG............................................................................................. 22 1 1 1.00 1 0 1
........................................................................................TAGTACCAATCACTAACCACACGGC................................................................ 25 0 1 1.00 1 0 1
......................................................................TAGTTAGCTGATTGCT........................................................................................... 16 0 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAAG......................................................................................... 26 3 1 1.00 1 0 1
..............................................................ATGCCGTGTAGTTAGCTGATTGC............................................................................................ 23 2 1 1.00 1 1 0
..............................................CGTGAGTCTAGTTACT................................................................................................................... 16 0 1 1.00 1 1 0
.............................................................TAGGCAGTGTAGTTAGCTGATTGA............................................................................................ 24 1 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAACTGATTGC............................................................................................ 23 1 1 1.00 1 1 0
.............................................................TAGGCAGTGCAGTTAGCTGATTG............................................................................................. 23 1 1 1.00 1 1 0
.................................ACCAGAGTTTTCCCGTGAGTCTAGTTA..................................................................................................................... 27 0 1 1.00 1 0 1
...............................................................................................AATCACTAACCACACGGCCAGTA........................................................... 23 2 1 1.00 1 0 1
..............................................................AGGCAGTCTAGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGCGTAGTTAGCTGAT............................................................................................... 20 1 1 1.00 1 1 0
...............................................................................................AATCACTAAACACACGGCCAG............................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGTGTGGTTAGCTGATTG............................................................................................. 22 1 1 1.00 1 1 0
................................................................GCAGTGTTGTTAGCTGATTGC............................................................................................ 21 1 1 1.00 1 1 0
....................................................................................CTGATAGTACCAATCACTAACCACACGG................................................................. 28 0 1 1.00 1 0 1
..............................................................AGTCAGTGTAGTTAGCTGATTGCA........................................................................................... 24 2 1 1.00 1 1 0
...............................................................GGCAGGGTAGTTAGCTGATT.............................................................................................. 20 1 1 1.00 1 0 1
..............................................................AGGCCGTGTAGTTAGCTGATTGA............................................................................................ 23 2 1 1.00 1 1 0
..............................................................AGGCTGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
....................................................................TGTAGTTAGCTGATTG............................................................................................. 16 0 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGCTGAGTG............................................................................................. 22 1 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTGGCTGATTG............................................................................................. 22 1 1 1.00 1 0 1
..............................................................AGGTAGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
..................................................................AGTGTAGTTAGCTGAT............................................................................................... 16 0 1 1.00 1 1 0
..............................................................AGGCAGTGTAGCTAGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
................................................................GCAGTGTAGTTAGCTGATTGCTCGTA....................................................................................... 26 2 1 1.00 1 0 1
..............................................................AGGCAGAGTAGTTAGCTGATTGA............................................................................................ 23 2 1 1.00 1 1 0
..............................................................AGGCATTGTAGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 1 0
..............................................................AGGCGGTGTAGTTAGCTGATTGCT........................................................................................... 24 1 1 1.00 1 1 0
.............................................................TAGGCAGTGTAGTTAGCTGATTAA............................................................................................ 24 2 1 1.00 1 1 0
..................................................................AGTGTAGTTAGCTGATTGC............................................................................................ 19 0 1 1.00 1 0 1
...........................................................AAAAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 26 2 1 1.00 1 1 0
............................................................ATAGGCAGTGTAGTTAGCTGATTG............................................................................................. 24 1 1 1.00 1 0 1
.........................AACTTGAGACCAGAGTTTTCCCGTGAGT............................................................................................................................ 28 0 1 1.00 1 0 1
.............................................................AAGGCAGTGTAGTTAGCTGTTT.............................................................................................. 22 2 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGATGATTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGTTTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCTGATA....................................................................................... 28 0 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGAATGC............................................................................................ 23 1 1 1.00 1 1 0
.....................................................................................TGATAGTACCAATCACTAACCACACG.................................................................. 26 0 1 1.00 1 0 1
..............................................................AGGCACTGTAGTTAGCTTATTGC............................................................................................ 23 2 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATGG............................................................................................. 22 1 1 1.00 1 1 0
..............................................................AGGCAGTTTAGTTAGCTGATTGCC........................................................................................... 24 2 1 1.00 1 1 0
............................................................GAAGGCAGTGTAGTTAGCTGATTGC............................................................................................ 25 2 1 1.00 1 0 1
...............................................................AGCAGTGTAGTTAGCTGATTGC............................................................................................ 22 1 1 1.00 1 1 0
.............................................................AAGGCAGTGTAGTTAGCTGATTGCCT.......................................................................................... 26 3 1 1.00 1 0 1
..............................................................AGGCACTGTAGTTAGCTGATTGCA........................................................................................... 24 2 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTAATTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCCGTGTAGTTAGCTGATTGT............................................................................................ 23 2 2 1.00 2 2 0
.............................................................TAGGCAGTGTAGTTAGCTAATT.............................................................................................. 22 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTCATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGTGTCGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 1 0
...................................................................................................ACTAACCACACGGCCAGGT........................................................... 19 0 1 1.00 1 1 0
...............................................................GGCAGTGTAGTTAGCTGCTTGC............................................................................................ 22 1 1 1.00 1 1 0
................................................................GCCGTGTAGTTAGCTGATTGC............................................................................................ 21 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTACCTGATTG............................................................................................. 22 1 1 1.00 1 1 0
..............................................................AGGCAGCGTTGTTAGCTGATT.............................................................................................. 21 2 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGCTGTTT.............................................................................................. 21 1 1 1.00 1 1 0
....................................................................................ATGATAGTACCAATCACTAACCACACGGC................................................................ 29 1 1 1.00 1 0 1
..............................................................................................AAATCACTAACCACACGGCCAGGT........................................................... 24 1 1 1.00 1 0 1
..................................................................AGTGTAGTTAGCCGATTG............................................................................................. 18 1 1 1.00 1 0 1
...............................................................................................AATCACTAACCACACGGCCAAT............................................................ 22 2 1 1.00 1 0 1
..............................................................................................AAATCACTAACCACACGGCCAGG............................................................ 23 1 1 1.00 1 0 1
..............................................................AGGCAGCGTAGTTAGCTGATTGCT........................................................................................... 24 1 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGATGATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGTATAGTTAGCTGATTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGAGT.............................................................................................. 21 1 1 1.00 1 0 1
.............................................................CAGGCAGTGTAGTTAGCTGATTG............................................................................................. 23 1 1 1.00 1 1 0
................................................................................................ATCACTAACCACACGGCCAGGTTT......................................................... 24 2 1 1.00 1 0 1
..............................................................AGGCAGTGAAGTTAGCTGATTGCTT.......................................................................................... 25 2 1 1.00 1 1 0
..............................................................AAGCAGTGTAGTTAGCTGAT............................................................................................... 20 1 1 1.00 1 0 1
.............................................................AAGGCAGTGTAGTTAGCTGACTG............................................................................................. 23 2 1 1.00 1 0 1
......................................................................................GATAGTACCAATCACTAACCACACGG................................................................. 26 0 1 1.00 1 0 1
.............................................................AAGGCAGTGTAGTTAGCTGA................................................................................................ 20 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGTTCGTA....................................................................................... 28 3 1 1.00 1 0 1
.............................................................AAGGCAGCGTAGTTAGCTGATT.............................................................................................. 22 2 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTGGCTGATTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGAAT.............................................................................................. 21 1 1 1.00 1 1 0
................................................................GCAGCGTAGTTAGCTGATTGC............................................................................................ 21 1 1 1.00 1 1 0
..............................................................AGGCGGTGTAGTTAGCTGATTGCTAT......................................................................................... 26 3 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCAAA......................................................................................... 26 2 1 1.00 1 1 0
.............................................................AAGGCAGTGTAGTTAGCTGATTCC............................................................................................ 24 2 1 1.00 1 1 0
................................................................................................ATCACTAACCACACGGCCAGGTA.......................................................... 23 0 1 1.00 1 0 1
...............................................................................................AATCACTCACCACACGGCCAGGTA.......................................................... 24 1 1 1.00 1 0 1
.............................................................ACGGCAGTGTAGTTAGCTGATT.............................................................................................. 22 2 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGCTGATTGCTCGCA....................................................................................... 28 3 1 1.00 1 0 1
..............................................................AGGCAGGGGAGTTAGCTGATTGC............................................................................................ 23 2 2 1.00 2 2 0
..............................................................TGGCAGTGTAGTTAGCTGATTGCT........................................................................................... 24 1 1 1.00 1 0 1
..............................................................AGGCAGTGTGGTTAGCTGATTGCT........................................................................................... 24 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGCTTGC............................................................................................ 23 1 1 1.00 1 0 1
...............................................................GGCTGTGTAGTTAGCTGATTGC............................................................................................ 22 1 1 1.00 1 1 0
..............................................................AGGCGGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGCTGATTGAC........................................................................................... 24 2 1 1.00 1 1 0
.............................................................AAGGCAGTGTAGTTAGCCGATTGC............................................................................................ 24 2 1 1.00 1 1 0
...............................................................GGCAGTGTAGTTAGCTGATC.............................................................................................. 20 1 1 1.00 1 0 1
..............................................................AGGCAGTGTAGTTAGTTGATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGGGTAGTTAGATGATTGC............................................................................................ 23 2 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGAAT.......................................................................................... 25 3 2 1.00 2 2 0
..............................................................................................AAATCACTAACCACACGGCCAGGA........................................................... 24 2 1 1.00 1 0 1
..............................................................AGGCAGTGTATTTAGCTGATT.............................................................................................. 21 1 2 1.00 2 1 1
...............................................................................................AATCACTAACCACACGGCCAGTT........................................................... 23 1 1 1.00 1 0 1
.....................................................................GTAGTTAGCTGATTGCAGGCAGT..................................................................................... 23 3 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTTC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGCTAGCTGAT............................................................................................... 20 1 1 1.00 1 1 0
...........................................................GAAAGGCAGTGTAGTTAGCTGATTGCT........................................................................................... 27 3 1 1.00 1 0 1
.............................................................TAGGCAGTGTAGTTAGCTGATA.............................................................................................. 22 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTCCT........................................................................................... 24 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATCGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCGGTGTAGTTAGCTGAT............................................................................................... 20 1 1 1.00 1 0 1
...............................................................GGCAGAGTAGTTAGCTGATTGA............................................................................................ 22 2 1 1.00 1 1 0
..............................................................AGGCAGTGTACTTAGCTGATTGC............................................................................................ 23 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGCTTTTT....................................................................................... 28 3 1 1.00 1 1 0
..............................................................AGGCAGTGTCGTTAGCTGATTG............................................................................................. 22 1 1 1.00 1 1 0
...............................................................................................AATCACTAACCACACGGCCAGGTT.......................................................... 24 1 1 1.00 1 0 1
................................................................................................ATCACTAACCACACGGCCACGT........................................................... 22 1 1 1.00 1 1 0
..............................................................AGGCCGTGTAGTTAGCTGATTGCTTT......................................................................................... 26 3 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGATTGATAA......................................................................................... 26 2 1 1.00 1 1 0
..............................................................AGGCAGTGCAGTTAGCTGATTGCTGAT........................................................................................ 27 1 1 1.00 1 1 0
..............................................................AAGCAGTGTAGTTAGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCAGTGAAGTTAGCTGATTGCTGAT........................................................................................ 27 1 1 1.00 1 1 0
..............................................................AGGCAGTGTAGTTAGCTGGT............................................................................................... 20 1 1 1.00 1 1 0
................................................................................................ATCACTAACCACACGGCCA.............................................................. 19 0 1 1.00 1 0 1
....................................................................TGTAGTTAGCTGATT.............................................................................................. 15 0 4 1.00 4 0 4
..............................................................AGGCAGTGTAGTTCGCTGATT.............................................................................................. 21 1 1 1.00 1 0 1
..............................................................AGGCCGTGTAGTTAGCTGATTGCA........................................................................................... 24 2 1 1.00 1 1 0

Anti-sense strand reads

CGGATAGTGTTCCTTACCACCGTGGTTGAACTCTGGTCTCAAAAGGGCACTCAGATCAATGATCCGTCACATCAATCGACTAACGACTATCATGGTTAGTGATTGGTGTGCCGGTCCATTTTTCTAAACTCACAAGTAGGTCTACACAACGGACCCGTTGTACTCGCGCAAAGTCCT
********************************************..((((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:27 AM