ID:

ocu-mir-34b

 Coordinate:

chr1:104894558-104894641 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-33.0 -32.9 -32.9

Sense Strand Reads

ACGGCGTCGGTGCTGCGGACCGTCCGGGAGCTGCAGCCGCGGGGCGCCCGGTGCTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTACTGTGGTGCTTACAATCACTAACTCCACTGCCATCAAAACAAGGCACAGCATCACCGCCGCGCCGCCGGAGGACGACGCCGGCTCTGCGGCTCCCTG
************************************************..(((((..((((...(((((((...((((.((((((((..((...)).))))))))))))...)))))))....))))..))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
...............................................................AGGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 0 1 9136.00 9136 8865 271
...............................................................AGGCAGTGTAATTAGCTGATT.................................................................................................... 21 0 1 2226.00 2226 353 1873
...............................................................AGGCAGTGTAATTAGCTGAT..................................................................................................... 20 0 1 599.00 599 575 24
...............................................................AGGCAGTGTAATTAGCTGATTG................................................................................................... 22 0 1 384.00 384 137 247
................................................................GGCAGTGTAATTAGCTGATTGT.................................................................................................. 22 0 1 174.00 174 168 6
...............................................................AGGCAGTGTAGTTAGCTGATTGT.................................................................................................. 23 1 2 167.00 334 332 2
..............................................................TAGGCAGTGTAATTAGCTGATT.................................................................................................... 22 0 1 148.00 148 87 61
...................................................................AGTGTAATTAGCTGATTGT.................................................................................................. 19 0 1 143.00 143 143 0
...............................................................AGGCAGTGTAATTAGCTGA...................................................................................................... 19 0 1 124.00 124 117 7
...............................................................AGGCAGTGTAATTAGCTGATTGTA................................................................................................. 24 0 1 124.00 124 103 21
...............................................................AGGCAGTGTAATTAGCTGATTGTT................................................................................................. 24 1 1 117.00 117 117 0
.................................................................GCAGTGTAATTAGCTGATTGT.................................................................................................. 21 0 1 109.00 109 108 1
...............................................................AGGCAGTGTAATTAGCTGATTGTAT................................................................................................ 25 1 1 98.00 98 98 0
....................................................................GTGTAATTAGCTGATTGT.................................................................................................. 18 0 1 94.00 94 91 3
..............................................................TAGGCAGTGTAATTAGCTGAT..................................................................................................... 21 0 1 75.00 75 67 8
................................................................GGCAGTGTAATTAGCTGATT.................................................................................................... 20 0 1 70.00 70 3 67
......................................................................GTAATTAGCTGATTGT.................................................................................................. 16 0 1 42.00 42 42 0
..............................................................AAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 24 1 1 40.00 40 29 11
..............................................................TAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 24 0 1 39.00 39 32 7
...............................................................AGGCCGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 37.00 37 36 1
..............................................................AAGGCAGTGTAATTAGCTGATT.................................................................................................... 22 1 1 36.00 36 0 36
...............................................................AGGCAGTGTAATTAGCTGATTGA.................................................................................................. 23 1 1 34.00 34 27 7
...............................................................AGGCAGTGTAATTAGCT........................................................................................................ 17 0 1 32.00 32 31 1
..............................................................TAGGCAGTGTAATTAGCTGATTG................................................................................................... 23 0 1 32.00 32 14 18
...............................................................AGGCAGTGTAATTAGCTGATTGTAA................................................................................................ 25 1 1 29.00 29 27 2
..................................................................CAGTGTAATTAGCTGATTGT.................................................................................................. 20 0 1 27.00 27 25 2
....................................................................................................AATCACTAACTCCACTGCCA................................................................ 20 0 1 26.00 26 0 26
...............................................................AGGCAGGGTAATTAGCTGATTGT.................................................................................................. 23 1 1 23.00 23 23 0
...............................................................TGGCAGTGTAATTAGCTGATT.................................................................................................... 21 1 1 19.00 19 0 19
...............................................................AGGCAGTGTAATTAGCTG....................................................................................................... 18 0 1 19.00 19 18 1
...............................................................AGGCAGAGTAATTAGCTGATTGT.................................................................................................. 23 1 1 18.00 18 18 0
..............................................................TAGGCAGTGTAATTAGCTGATTGA.................................................................................................. 24 1 1 17.00 17 2 15
................................................................GGCAGTGTAATTAGCTGAT..................................................................................................... 19 0 1 16.00 16 15 1
...............................................................AGGCAGCGTAATTAGCTGATTGT.................................................................................................. 23 1 1 16.00 16 15 1
...............................................................AGTCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 16.00 16 16 0
...............................................................AGGCAGGGTAATTAGCTGATT.................................................................................................... 21 1 1 15.00 15 5 10
...............................................................AGGCAGAGTAATTAGCTGATT.................................................................................................... 21 1 1 14.00 14 2 12
...............................................................AGGCAGTGCAATTAGCTGATTGT.................................................................................................. 23 1 1 14.00 14 14 0
...............................................................AGGCAGTGGAATTAGCTGATTGT.................................................................................................. 23 1 1 13.00 13 13 0
..............................................................TAGGCAGTGTAATTAGCTGA...................................................................................................... 20 0 1 13.00 13 0 13
...............................................................AGGCCGTGTAATTAGCTGATT.................................................................................................... 21 1 1 12.00 12 1 11
.................................................................GCAGTGTAATTAGCTGATT.................................................................................................... 19 0 1 12.00 12 7 5
....................................................................................................AATCACTAACTCCACTGCCAT............................................................... 21 0 1 11.00 11 0 11
...............................................................AGGCAGTGTAATTAGCTGATTGC.................................................................................................. 23 1 2 11.00 22 22 0
...............................................................AGGCAGTGAAATTAGCTGATTGT.................................................................................................. 23 1 1 10.00 10 9 1
..................................................................CAGTGTAATTAGCTGATT.................................................................................................... 18 0 1 10.00 10 8 2
...............................................................AGGCAGTGTAATTAGCTGATTGTATCGTA............................................................................................ 29 3 1 10.00 10 0 10
...............................................................AGGCAGTGTCATTAGCTGATTGT.................................................................................................. 23 1 1 10.00 10 10 0
...............................................................AGGCAGTGTAATTAGCTGCTTGT.................................................................................................. 23 1 1 10.00 10 10 0
...............................................................AGGCAGTGCAATTAGCTGATT.................................................................................................... 21 1 1 9.00 9 2 7
...............................................................AGGCGGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 8.00 8 8 0
.....................................................................TGTAATTAGCTGATTGT.................................................................................................. 17 0 1 8.00 8 8 0
...............................................................AGGCAGTGTGATTAGCTGATTGT.................................................................................................. 23 1 1 8.00 8 8 0
...............................................................AGGCAGTGAAATTAGCTGATT.................................................................................................... 21 1 1 8.00 8 1 7
...............................................................AGGCAGTGTAGTTAGCTGATTGAA................................................................................................. 24 2 2 7.00 14 13 1
................................................................GGCAGTGTAATTAGCTGATTGTT................................................................................................. 23 1 1 7.00 7 7 0
...............................................................AGGCAGTCTAATTAGCTGATTGT.................................................................................................. 23 1 1 6.00 6 6 0
.................................................................GCAGTGTAATTAGCTGATTG................................................................................................... 20 0 1 6.00 6 5 1
...............................................................AGGCAGTGTAATTAGCCGATTGT.................................................................................................. 23 1 1 6.00 6 6 0
...............................................................AGGCAGTGTAATTAGTTGATTGT.................................................................................................. 23 1 1 6.00 6 6 0
...............................................................AGGCAGTGTAATTAGCTGATCGT.................................................................................................. 23 1 1 6.00 6 5 1
................................................................GGCAGTGTAATTAGCTGATTGTA................................................................................................. 23 0 1 6.00 6 5 1
...............................................................AGGCAGTGTAATTAGCTGTTTGT.................................................................................................. 23 1 1 6.00 6 6 0
...............................................................AGGCAGCGTAATTAGCTGATT.................................................................................................... 21 1 1 6.00 6 0 6
...............................................................CGGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 6.00 6 6 0
................................................................GGCAGTGTAATTAGCTGA...................................................................................................... 18 0 1 6.00 6 5 1
..............................................................AAGGCAGTGTAATTAGCTGATTGTT................................................................................................. 25 2 1 6.00 6 6 0
....................................................................GTGTAATTAGCTGATT.................................................................................................... 16 0 2 5.50 11 0 11
.................................................................GCAGTGTAGTTAGCTGATTGT.................................................................................................. 21 1 2 5.50 11 11 0
...............................................................AGGCAGTGTAATTAGCTGATTGAT................................................................................................. 24 2 2 5.00 10 10 0
..............................................................TAGGCAGTGTAATTAGCTGATTGAA................................................................................................. 25 1 1 5.00 5 4 1
...............................................................AGACAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 5.00 5 5 0
...............................................................AGGCAGTGTAATTAGCTGATTA................................................................................................... 22 1 1 5.00 5 5 0
...................................................................................................CAATCACTAACTCCACTGCCA................................................................ 21 0 1 5.00 5 0 5
................................................................GGCAGTGTAATTAGCTGATTG................................................................................................... 21 0 1 5.00 5 2 3
............................................................GAAAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 26 3 1 5.00 5 0 5
...............................................................AGGCTGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 5.00 5 5 0
...............................................................ATGCAGTGTAGTTAGCTGATTGT.................................................................................................. 23 2 2 4.50 9 9 0
...............................................................AGGCAGTGTAATTAACTGATTGT.................................................................................................. 23 1 1 4.00 4 4 0
...............................................................AGGCAGTGTAATTAGCTGATTT................................................................................................... 22 1 1 4.00 4 4 0
..............................................................AAGGCAGTGTAATTAGCTGATTG................................................................................................... 23 1 1 4.00 4 0 4
...............................................................AGGCAATGTAATTAGCTGATTGT.................................................................................................. 23 1 1 4.00 4 4 0
............................................................GAAAGGCAGTGTAATTAGCTGATT.................................................................................................... 24 3 2 4.00 8 0 8
...............................................................AGGCGGTGTAATTAGCTGATT.................................................................................................... 21 1 1 4.00 4 1 3
.....................................................................................................ATCACTAACTCCACTGCCAT............................................................... 20 0 1 4.00 4 0 4
..............................................................AAGGCAGTGTAATTAGCTGATTGTA................................................................................................. 25 1 1 4.00 4 3 1
...............................................................AGGCAGTGTAATTAGCTGATTGAA................................................................................................. 24 1 1 4.00 4 2 2
...................................................................................................CAATCACTAACTCCACTGCCAT............................................................... 22 0 1 4.00 4 0 4
...............................................................AGGCAGTGTAATTAGCTAATTGT.................................................................................................. 23 1 1 4.00 4 4 0
...............................................................AGGCAGTGTAATCAGCTGATTGT.................................................................................................. 23 1 1 4.00 4 4 0
...............................................................AGGCAGTGGAATTAGCTGAT..................................................................................................... 20 1 1 4.00 4 4 0
...................................................................AGTGTAATTAGCTGATT.................................................................................................... 17 0 2 4.00 8 7 1
...............................................................AGCCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 4.00 4 4 0
...............................................................AGGAAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGCACTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGCAGTGTAATTAGCTGAGT.................................................................................................... 21 1 1 3.00 3 0 3
...............................................................GGGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGCAGTGAAATTAGCTGATTG................................................................................................... 22 1 1 3.00 3 2 1
....................................................................................................AATCACTAACTCCACTGCC................................................................. 19 0 1 3.00 3 0 3
...............................................................AGGCAGTGTAATTAGCTGATTGG.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGCAGTGGAATTAGCTGATT.................................................................................................... 21 1 1 3.00 3 0 3
....................................................................................................AATCACTAACTCCACTGCCATC.............................................................. 22 0 1 3.00 3 0 3
...............................................................AGGCAGTGTAATTGGCTGATT.................................................................................................... 21 1 1 3.00 3 2 1
...............................................................AGGCAGTGTAATTATCTGATTGT.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGCAGTGTAATTAGCTGATTAT.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGGAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 3.00 3 3 0
...............................................................AGGCAGTGTAATTAGATGATT.................................................................................................... 21 1 1 3.00 3 0 3
.............................................................ATAGGCAGTGTAATTAGCTGATT.................................................................................................... 23 1 1 3.00 3 0 3
.....................................................................................................ATCACTAACTCCACTGCCA................................................................ 19 0 1 3.00 3 0 3
...............................................................AGGGAGTGTAATTAGCTGATT.................................................................................................... 21 1 1 3.00 3 0 3
................................................................AGCAGTGTAATTAGCTGATTGT.................................................................................................. 22 1 1 3.00 3 3 0
................................................................GGCAGAGTAATTAGCTGATT.................................................................................................... 20 1 1 2.00 2 0 2
...................................................................................................AAATCACTAACTCCACTGCCA................................................................ 21 1 1 2.00 2 0 2
...............................................................AGGCTGTGTAATTAGCTGATT.................................................................................................... 21 1 1 2.00 2 0 2
...............................................................AAGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 2.00 2 2 0
.................................................................GCAGTGTAATTAGCTGATTGTAT................................................................................................ 23 1 1 2.00 2 2 0
..............................................................TAGGCAGTGTAATTAGCTGATTGTA................................................................................................. 25 0 1 2.00 2 0 2
...............................................................AGGCAGTGTAATTAGCTGATTGTGA................................................................................................ 25 2 1 2.00 2 2 0
...............................................................TGGCAGTGTAATTAGCTGATTG................................................................................................... 22 1 1 2.00 2 0 2
...............................................................AGGCCGTGTAATTAGCTGATTGTA................................................................................................. 24 1 1 2.00 2 2 0
...........GCTGCGGACCGTCCGGGAGCTGCAG.................................................................................................................................................... 25 0 1 2.00 2 2 0
....................................................................................................AATCACTAACTCCACTGCCATA.............................................................. 22 1 1 2.00 2 0 2
..............................................................GAGGCAGTGTAATTAGCTGATT.................................................................................................... 22 1 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGATG.................................................................................................... 21 1 1 2.00 2 0 2
...............................................................AGGTAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 2.00 2 2 0
...............................................................AGGCAGAGTAATTAGCTGATTGTT................................................................................................. 24 2 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGAATGT.................................................................................................. 23 1 1 2.00 2 2 0
................................................................GGCAGTGAAATTAGCTGATT.................................................................................................... 20 1 1 2.00 2 0 2
...............................................................AGGCAGTGTAATTAGCTGATTGTAC................................................................................................ 25 0 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGATTGTG................................................................................................. 24 1 1 2.00 2 0 2
.....................................................................................................ATCACTAACTCCACTGCCATC.............................................................. 21 0 1 2.00 2 0 2
..............................................................AAGGCAGTGTAATTAGCTGAT..................................................................................................... 21 1 1 2.00 2 1 1
...............................................................AGGCAGTGTAATTAGC......................................................................................................... 16 0 1 2.00 2 1 1
..............................................................TAGGCAGTGTAATTAGCTG....................................................................................................... 19 0 1 2.00 2 1 1
...............................................................AGGCAGTGTAATTAGCTCATTGT.................................................................................................. 23 1 1 2.00 2 2 0
......................................GCGGGGCGCCCGGTGCTCGGTTTGT......................................................................................................................... 25 0 1 2.00 2 2 0
...............................................................AGGCAGTATAATTAGCTGATT.................................................................................................... 21 1 1 2.00 2 0 2
.............................................................ATAGGCAGTGTAATTAGCTGAT..................................................................................................... 22 1 1 2.00 2 2 0
...............................................................AGGCAGTGCAATTAGCTGAT..................................................................................................... 20 1 1 2.00 2 1 1
................................................................GGCAGAGTAATTAGCTGATTGT.................................................................................................. 22 1 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTCGCTGATTGT.................................................................................................. 23 1 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGATC.................................................................................................... 21 1 1 2.00 2 1 1
....................................................................................................AATCACTAACTCCACTGCCATCAT............................................................ 24 1 1 2.00 2 0 2
...............................................................AGGCAGTGTAATTAGCTGATA.................................................................................................... 21 1 1 2.00 2 2 0
................................................................GGCAGGGTAATTAGCTGATTGT.................................................................................................. 22 1 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGAAT.................................................................................................... 21 1 1 2.00 2 0 2
...............................................................AGGCAGTGTACTTAGCTGATTGT.................................................................................................. 23 1 1 2.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGACT.................................................................................................... 21 1 1 2.00 2 0 2
...............................................................AGGCAGTGTAGTTAGCTGATTGCAC................................................................................................ 25 2 2 2.00 4 4 0
...............................................................AGGCAGGGTAATTAGCTGATTG................................................................................................... 22 1 1 2.00 2 1 1
............................................................TGCAGGCAGTGTAGTTAGCTGAT..................................................................................................... 23 2 1 2.00 2 2 0
..............................................................AAGGCAGTGTAATTAGCTGA...................................................................................................... 20 1 1 2.00 2 2 0
...............................................................AGGCAGTATAATTAGCTGATTGT.................................................................................................. 23 1 1 2.00 2 2 0
...............................................................AGGCAGTGTGATTAGCTGATT.................................................................................................... 21 1 1 2.00 2 0 2
...............................................................AGGCAATGTAATTAGCTGATT.................................................................................................... 21 1 1 2.00 2 1 1
...............................................................AGGTAGTGTAATTAGCTGAT..................................................................................................... 20 1 1 2.00 2 2 0
....................................................................GTGTAATTAGCTGATTG................................................................................................... 17 0 2 1.50 3 0 3
................................................................GGCAGTGTAGTTAGCTGATTGT.................................................................................................. 22 1 2 1.50 3 3 0
...............................................................AGGCAGTGTAGTTAGCTGATTGCAAT............................................................................................... 26 3 2 1.50 3 3 0
....................................................................GTGTAATTAGCTGAT..................................................................................................... 15 0 3 1.33 4 3 1
...............................................................AGGCAGAGTAATTAGCTGATTG................................................................................................... 22 1 1 1.00 1 0 1
.................................................................GCAGTGGAATTAGCTGATTGT.................................................................................................. 21 1 2 1.00 2 2 0
.........................................................GTAAGTAGGCAGTGTAATTAGCTGATTG................................................................................................... 28 2 1 1.00 1 0 1
..................................................................................................ACAATCACTAACTCCACTGCCAT............................................................... 23 0 1 1.00 1 1 0
...............................................................AGGCAGTGTATTTAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGAATG................................................................................................... 22 1 1 1.00 1 0 1
...............................................................AGGCAGTGTATTTAGCTGATT.................................................................................................... 21 1 2 1.00 2 1 1
...............................................................AGGCAGTGTAATTAGCTGATTC................................................................................................... 22 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATCAGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
........................................................TGATTGTAGGCAGTGTAATTAGC......................................................................................................... 23 2 1 1.00 1 1 0
..............................................................TAGGCAGGGTAATTAGCTGATTG................................................................................................... 23 1 1 1.00 1 0 1
...............................................................AGGTAGTGTAATTAGCTGATT.................................................................................................... 21 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAACTAGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTATCTGATTGTAT................................................................................................ 25 2 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGTTTG................................................................................................... 22 1 1 1.00 1 0 1
...................................................................................................CAATCACTAACTCCACTGCCATA.............................................................. 23 1 1 1.00 1 0 1
...............................................................AGGCGGTGTAATTAGCTGATTAT.................................................................................................. 23 2 1 1.00 1 1 0
...............................................................AGGCAGTGGAATTAGCTGATTGTAA................................................................................................ 25 2 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGATGGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAGTTAGCTGATTGAAT................................................................................................ 25 3 2 1.00 2 2 0
...............................................................AGGCAGTGTAATTAGCTGATTCT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................AGGAAGTGTAATTAGCTGATTG................................................................................................... 22 1 1 1.00 1 0 1
..................................................................................................AAAATCACTAACTCCACTGCCA................................................................ 22 1 1 1.00 1 0 1
.............................................................ATAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 25 1 1 1.00 1 1 0
................................................................GGCAGTGTAATGAGCTGATTGT.................................................................................................. 22 1 1 1.00 1 1 0
............................................................GAAAGGCAGTGTAATTAGCTGATTG................................................................................................... 25 3 1 1.00 1 0 1
...............................................................AGGCAGTGCAATTAGCTGATTGTT................................................................................................. 24 2 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGACTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................AGGCAGTGTTATTAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
......................................................................................................TCACTAACTCCACTGCCAT............................................................... 19 0 1 1.00 1 0 1
..............................................................TAGGCAGTGCAATTAGCTGATT.................................................................................................... 22 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGATTTTA................................................................................................. 24 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGAG..................................................................................................... 20 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTACCTGAT..................................................................................................... 20 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATAAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
..............................................................TGGGCAGTGTAATTAGCTGATTG................................................................................................... 23 1 1 1.00 1 0 1
..............................................................TAGGCAGTGTAATTAGCTGATTCT.................................................................................................. 24 1 1 1.00 1 1 0
...................................................................AGAGTAATTAGCTGATTGT.................................................................................................. 19 1 1 1.00 1 1 0
..............................................................TAGGCAGTGTAATTAGCTGATTGTT................................................................................................. 25 1 1 1.00 1 0 1
..................................................................CAGTGTAATTAGCTGATTGTAT................................................................................................ 22 1 1 1.00 1 1 0
...............................................................AGGCGGTGTAATTAGCTGATTG................................................................................................... 22 1 1 1.00 1 1 0
...............................................................AGGCAGTTTAATTAGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTAGCTCATT.................................................................................................... 21 1 1 1.00 1 0 1
..............................................................CAGGCAGTGTAATTAGCTGATTG................................................................................................... 23 1 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTACCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
.............................................................ATAGGCAGTGTAATTAGCTGATTAAA................................................................................................. 26 3 1 1.00 1 0 1
...............................................................AGGCAGTGGCATTAGCTGATTGT.................................................................................................. 23 2 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAACTGATT.................................................................................................... 21 1 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTAGCTGATTGTTCACTG............................................................................................ 29 3 1 1.00 1 0 1
...............................................................TGGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTTGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
..............................................................TAGGCAGTGTGATTAGCTGATTG................................................................................................... 23 1 1 1.00 1 1 0
.............................................................AAAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 25 2 1 1.00 1 1 0
....................................................................................................AATCACTAACTCCACTGCCATCAA............................................................ 24 0 1 1.00 1 0 1
....................................................................................................AATCACTAACTCCACCGCCA................................................................ 20 1 1 1.00 1 0 1
..............................................................AAGGCAGTGTAATTAGCTG....................................................................................................... 19 1 2 1.00 2 2 0
....................................................................GAGTAATTAGCTGATTGT.................................................................................................. 18 1 1 1.00 1 1 0
.....................................................................................................ATCACTAACTCCACTGCC................................................................. 18 0 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTAGTTGATT.................................................................................................... 21 1 1 1.00 1 0 1
..............................................................TAGGCCGTGTAATTAGCTGATTGT.................................................................................................. 24 1 1 1.00 1 1 0
...............................................................AGGCAGTTTAATTAGCTGATTG................................................................................................... 22 1 1 1.00 1 0 1
.................................................................GCAGGGTAATTAGCTGATTGT.................................................................................................. 21 1 1 1.00 1 1 0
..............................................................TAGGCAGTGTAATTAGCTGATTA................................................................................................... 23 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGATTGTTCGGA............................................................................................. 28 3 1 1.00 1 0 1
................................................................GGCAGTGTAATTAGCTGATC.................................................................................................... 20 1 1 1.00 1 0 1
...............................................................AGGCCGTGTAGTTAGCTGATTGT.................................................................................................. 23 2 2 1.00 2 2 0
..............................................................TAGGCAGTGTAATTAGCTGAC..................................................................................................... 21 1 1 1.00 1 1 0
.................................................................GGAGTGTAATTAGCTGATTGT.................................................................................................. 21 1 1 1.00 1 1 0
...............................................................AGGCGGTGTAATTAGCTGATTGTT................................................................................................. 24 2 1 1.00 1 1 0
...............................................................ATGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................TGGCAGTATAATTAGCTGATTGT.................................................................................................. 23 2 1 1.00 1 0 1
...............................................................AGGCAGCGTAATTAGCTGAT..................................................................................................... 20 1 1 1.00 1 1 0
..............................................................TAGGCAGTGTAATTAGCTCAT..................................................................................................... 21 1 1 1.00 1 1 0
................................................................GGCAGTGGAATTAGCTGATTGT.................................................................................................. 22 1 1 1.00 1 1 0
............................................................GATAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 26 2 1 1.00 1 0 1
...............................................................AGGCGGTGGAATTAGCTGATT.................................................................................................... 21 2 1 1.00 1 0 1
...............................................................AGGCCGTGTAATTAGCTGATTGTT................................................................................................. 24 2 1 1.00 1 1 0
...........................................................ATGAAGGCAGTGTAGTTAGCTGATT.................................................................................................... 25 3 1 1.00 1 0 1
...............................................................AGGCAGAGTAGTTAGCTGATTGT.................................................................................................. 23 2 2 1.00 2 2 0
....................................................................................................AATCACTAACTCCACTGCCATCATG........................................................... 25 2 1 1.00 1 0 1
....................................................................................................AATCACTAACTCCACTGC.................................................................. 18 0 1 1.00 1 0 1
...............................................................AGGCAGTGTTATTAGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
...............................................................AGGCAGTGTCATTAGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
..............................................................AAGGCAGGGTAATTAGCTGATTGT.................................................................................................. 24 2 1 1.00 1 1 0
...............................................................AGGCCGTGTAATTAGCTGATTG................................................................................................... 22 1 1 1.00 1 1 0
..................................................................CAGTGTAATTAGCTGATTGTA................................................................................................. 21 0 1 1.00 1 1 0
..............................................................TAGGCAGTGTAATTAGCTGATTT................................................................................................... 23 1 1 1.00 1 0 1
...............................................................AGGCCGTGTAATTAGCTGAT..................................................................................................... 20 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGT...................................................................................................... 19 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGATTGTACTG.............................................................................................. 27 0 1 1.00 1 1 0
...................................................................................................CAATCACTAACTCCACTGC.................................................................. 19 0 1 1.00 1 1 0
..............................................................AAGGCAGTGAAATTAGCTGATTGT.................................................................................................. 24 2 1 1.00 1 1 0
...............................................................AGGCAGTGTAATGAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGTTGATTGTAT................................................................................................ 25 2 1 1.00 1 1 0
..................................................................CAGTGTAATTAGCTGAT..................................................................................................... 17 0 1 1.00 1 1 0
..............................................................AAGGCCGTGTAATTAGCTGATTGT.................................................................................................. 24 2 1 1.00 1 1 0
....................................................................................................AATCAATAACTCCACTGCCA................................................................ 20 1 1 1.00 1 0 1
.............................................................GAAGGCAGTGTAGTTAGCTGATTG................................................................................................... 24 2 2 1.00 2 0 2
.............................................................TAAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 25 2 1 1.00 1 0 1
..............................................................TTGGCAGTGTAATTAGCTGATT.................................................................................................... 22 1 1 1.00 1 0 1
...............................................................AGGCAGTGGAATTAGCTGATTG................................................................................................... 22 1 1 1.00 1 0 1
..............................................................TAGGCAGTGTAATAAGCTGATTGT.................................................................................................. 24 1 1 1.00 1 1 0
...................................................................................................CAATCACTAACTCCACTGCCATC.............................................................. 23 0 1 1.00 1 1 0
....................................................................................................AATCACTAACTCCACTGCCATCT............................................................. 23 1 1 1.00 1 0 1
.............................................................AAAGGCAGTGTAATTAGCTGATT.................................................................................................... 23 2 1 1.00 1 0 1
...............................................................AGGCAGTGTAATTAGATGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................ATGCAGTGTAATTAGCTGATT.................................................................................................... 21 1 1 1.00 1 1 0
...................................................................................................TAATCACTAACTCCACTGCCA................................................................ 21 1 1 1.00 1 0 1
.................................................................GCAGTGTAATTAGCTGAT..................................................................................................... 18 0 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGGTGATTG................................................................................................... 22 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTGGCTGATTGTT................................................................................................. 24 2 1 1.00 1 1 0
..............................................................TAGGCAGTGTGATTAGCTGATT.................................................................................................... 22 1 1 1.00 1 0 1
..............................................................TAGGCAGTGTAATTAG.......................................................................................................... 16 0 1 1.00 1 0 1
................................................................GGCAGTGTAATTGGCTGATTGT.................................................................................................. 22 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGATTGTTT................................................................................................ 25 2 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTGATTGTTTG............................................................................................... 26 3 1 1.00 1 0 1
................................................................GGCAGTGTAATTAGCTGATTGA.................................................................................................. 22 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTAGCTTATTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................ACGCAGTGTAATTAGCTGATTGT.................................................................................................. 23 1 1 1.00 1 1 0
...............................................................AGGCAGTGTAATTCGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
..............................................................TAGGCAGGGTAATTAGCTGATTGT.................................................................................................. 24 1 1 1.00 1 0 1
..............................................................TAGGCAGTGTAATTAGCTGAAT.................................................................................................... 22 1 1 1.00 1 1 0
..............................................................TAGGCAGTGTAATTAGCTGATA.................................................................................................... 22 1 1 1.00 1 0 1
..............................................................TAGGCAGTGTAATTAGCTGATTGTATCGTA............................................................................................ 30 3 1 1.00 1 0 1
................................................................GGCAGTGTAATTCGCTGATTGTA................................................................................................. 23 1 1 1.00 1 0 1
.................................................................GCAGTGTCATTAGCTGATTGT.................................................................................................. 21 1 1 1.00 1 1 0
...............................................................AGCCAGTGTAATTAGCTGATT.................................................................................................... 21 1 1 1.00 1 0 1
................................................................GGCAGTGTAATTAGCTGATTGTAT................................................................................................ 24 1 1 1.00 1 1 0
....................................................................................................TATCACTAACTCCACTGCCAT............................................................... 21 1 1 1.00 1 0 1
............................................................GACAGGCAGTGTAATTAGCTGATTGT.................................................................................................. 26 3 1 1.00 1 0 1
...............................................................AGGCAGTGTAGTTAGCTGCTTGTC................................................................................................. 24 3 3 0.67 2 2 0
...................................................................AGTGTAATTAGCTGATTGTT................................................................................................. 20 1 3 0.67 2 2 0
...............................................................AGGCAGTGTAGTTAGCTGATTCTCC................................................................................................ 25 3 2 0.50 1 0 1
..................................................................CAGTGTAATTAGCTGATTGC.................................................................................................. 20 1 2 0.50 1 1 0
...............................................................AGACGGTGTAATTAGCTGATT.................................................................................................... 21 2 2 0.50 1 0 1
..............................................................GAGGCAGTGTAGTTAGCTGATTGT.................................................................................................. 24 2 2 0.50 1 0 1
.....................................................................................................ATCACTAACTCCAATGCCAT............................................................... 20 1 2 0.50 1 0 1
.............................................................GAAGGCAGTGTAGTTAGCTGATT.................................................................................................... 23 2 2 0.50 1 0 1
..............................................................TAGGAAGTGTAATTAGCTGATT.................................................................................................... 22 1 2 0.50 1 1 0
...............................................................AGGCAGCGTAGTTAGCTGATTGT.................................................................................................. 23 2 2 0.50 1 1 0
...............................................................AGGCAGTGTCGTTAGCTGATTGT.................................................................................................. 23 2 2 0.50 1 1 0

Anti-sense strand reads

TGCCGCAGCCACGACGCCTGGCAGGCCCTCGACGTCGGCGCCCCGCGGGCCACGAGCCAAACATCCGTCACATTAATCGACTAACATGACACCACGAATGTTAGTGATTGAGGTGACGGTAGTTTTGTTCCGTGTCGTAGTGGCGGCGCGGCGGCCTCCTGCTGCGGCCGAGACGCCGAGGGAC
*************************************************..(((((..((((...(((((((...((((.((((((((..((...)).))))))))))))...)))))))....))))..))))).************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:27 AM