ID:

ocu-mir-331

Coordinate:

chr4:74616354-74616449 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-42.7	-42.3	-42.1

Sense Strand Reads

CCATGTGGGTGAAAAGCCCAGAAGCAACCTGAGCTGGGAGCACTCCCAAGGAATTTGGTTTTGTTTGGGTTTGTTCTAGGTATGGTCCCAGGGATCCCAGATCAAACCAGGCCCCTGGGCCTATCCTAGAACCAACCTAAACTCGCGCATCATTCCCGGAGCATCGAGAGTGTGAAGACTGAAGATGACCTGAGGC **********************************************************..(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
..............................................................................................................GCCCCTGGGCCTATCCTAGAAT................................................................	22	1	1	14.00	14	14	0
..............................................................................................................GCCCCTGGGCCTATCCTAGAT.................................................................	21	1	1	9.00	9	9	0
...........................................................................CTAGGTATGGTCCCAGGGAT.....................................................................................................	20	0	1	6.00	6	6	0
..............................................................................................................GCCCCTGGGCCTATCCTAGAA.................................................................	21	0	1	6.00	6	6	0
..............................................................................................................GCCCCTGGGCCTATCCTAGAC.................................................................	21	1	1	5.00	5	5	0
..............................................................................................................GCCCCTGGGCCTATCCTAGT..................................................................	20	1	1	2.00	2	2	0
.........................................................................TTCTAGGTATGGTCCCAGGGAT.....................................................................................................	22	0	1	1.00	1	1	0
.............................................................................................................AGCCCCTGGGCCTATCCTAG...................................................................	20	1	1	1.00	1	0	1
...............................................................................................................CCCCTGGGCCTATCCTAGAACC...............................................................	22	0	1	1.00	1	1	0
..............................................................................................................GCCCCTGGGCCTATCCTAGAAA................................................................	22	1	1	1.00	1	1	0
..............................................................................................................GCCCCTGGGCCTATCCTAGAATT...............................................................	23	2	1	1.00	1	1	0
...............................................................................................................CCCCTGGGCCTATCCTAGAC.................................................................	20	1	1	1.00	1	1	0
..............................................................................................................GCCCCTGGGCCTATCCTAGAAC................................................................	22	0	1	1.00	1	1	0
..............................................................................................................GCCCCTGGGCCTATCCTAGACCA...............................................................	23	2	2	1.00	2	2	0
..................................................................................................................CTGGGCCTATCCTAGAAT................................................................	18	1	3	0.33	1	1	0

Anti-sense strand reads

GGTACACCCACTTTTCGGGTCTTCGTTGGACTCGACCCTCGTGAGGGTTCCTTAAACCAAAACAAACCCAAACAAGATCCATACCAGGGTCCCTAGGGTCTAGTTTGGTCCGGGGACCCGGATAGGATCTTGGTTGGATTTGAGCGCGTAGTAAGGGCCTCGTAGCTCTCACACTTCTGACTTCTACTGGACTCCG ************************************************..(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))....**********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 05/16/2015 at 12:45 AM