ID:

ocu-mir-3084-2

 Coordinate:

chr18:66310869-66310938 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-22.1 -22.0 -21.9 -21.7

Sense Strand Reads

TGGCCTGCTTTCTTTATATGTGTGAGCAGTGTTATTTCTTATGTGCTACACAAATAGTTGAAGGTTAATTAGCAGTATAACTATCAAGTAGTAATGCTGCCAGTCTCCTTCAGACACAAATTTTATAAAATATGTTTTGAATGTGTTAGGTAAGTAGCAGGTCTTTTACT
***********************************.....((.........((((..(((((((...(((.(((((((.(((((...))))).))))))).)))..)))))))......))))..........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP		 GSM1528820
Adult_testes
......................................................................AGCAGTATAACTATCAAGTAGTAATGCTGC...................................................................... 30 0 1 5.00 5 0 5
.........................................................TTGAAGGTTAATTAGCAGTAT............................................................................................ 21 0 1 2.00 2 2 0
........................................................GTTGAAGGTTAATTAGCAGT.............................................................................................. 20 0 1 2.00 2 2 0
.........................................................TTGAAGGTTAATTAGCAGT.............................................................................................. 19 0 1 2.00 2 2 0
............................................GCTACACAAATAGTTGAAGGT......................................................................................................... 21 0 1 1.00 1 0 1
.............................................CTACACAAATAGTTGAAGGT......................................................................................................... 20 0 1 1.00 1 0 1
............................................................................................AATGCTGCCAGTCTCCTTCAG......................................................... 21 0 1 1.00 1 1 0
............................................................................................AATGCTGCCAGTCTCCTTCAGA........................................................ 22 0 1 1.00 1 0 1
............................................GCTGCACAAATAGTTGAAGGT......................................................................................................... 21 1 1 1.00 1 0 1
..........................................GTGCTACACAAATAGTTGAAGGT......................................................................................................... 23 0 1 1.00 1 0 1
........................................................GTTGAAGGTTAATTAGCAGTAT............................................................................................ 22 0 1 1.00 1 1 0
.........................................................TTGAAGGTTAATTAGCAGTATA........................................................................................... 22 0 1 1.00 1 1 0
........................................................GTTGAAGGTTAATTAGCAGTA............................................................................................. 21 0 1 1.00 1 1 0
............................................................................................AATGCTGCCAGTCTCCTTC........................................................... 19 0 2 0.50 1 1 0
.........................................................................................GAAAATGCTGCCAGTCTCCTTCAG......................................................... 24 3 3 0.33 1 1 0

Anti-sense strand reads

ACCGGACGAAAGAAATATACACACTCGTCACAATAAAGAATACACGATGTGTTTATCAACTTCCAATTAATCGTCATATTGATAGTTCATCATTACGACGGTCAGAGGAAGTCTGTGTTTAAAATATTTTATACAAAACTTACACAATCCATTCATCGTCCAGAAAATGA
***********************************.....((.........((((..(((((((...(((.(((((((.(((((...))))).))))))).)))..)))))))......))))..........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:38 AM