ID:

ocu-mir-300

 Coordinate:

chrUn0352:136573-136651 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.4 -37.3
mature
star
  1. chr1:166582110-166582124 +
  2. chrUn0352:136623-136637 +

Sense Strand Reads

AAGGCCGAGCCGGTGACCGGGACTGCTGAGCCTGCCCCGTGCTCTTGTTTGGTACTTAAAGCGAGGTTGCCCTGTGTATATTCTGTTTATTGACATGCAATATACAAGGGCAAGCTCTCTGTGAGTATCAAACCTTGTCTTGGACCCCGTCCACACTCAGCGAGGGACACGGTACGTGT
********************************************.....(((((((((.((.(((.(((((((.((((((((.((((....))))...))))))))))))))).))).)).)))))))))************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
....................................................................................................TATGCAAGGGCAAGCTCTCT........................................................... 20 1 1 4.00 4 4 0
...........................................................AGCGAGGTTGCCCTGTGTAT.................................................................................................... 20 0 1 3.00 3 3 0
............................................................GCGAGGTTGCCCTGTGTATAT.................................................................................................. 21 0 1 2.00 2 2 0
...........................................................AGCGAGGTTGCCCTGTGTATA................................................................................................... 21 0 1 1.00 1 0 1
...........................................................AGCGAGGTTGCCCTGTGTATAT.................................................................................................. 22 0 1 1.00 1 1 0
....................................................................................................TATGCAAGGGCAAGCTCTCTT.......................................................... 21 2 4 0.75 3 3 0
....................................................................................................TATACAAGGGCAAGC................................................................ 15 0 2 0.50 1 1 0
..........................................................................................................AGGGCAAGCTCTCTGT......................................................... 16 0 6 0.17 1 1 0

Anti-sense strand reads

TTCCGGCTCGGCCACTGGCCCTGACGACTCGGACGGGGCACGAGAACAAACCATGAATTTCGCTCCAACGGGACACATATAAGACAAATAACTGTACGTTATATGTTCCCGTTCGAGAGACACTCATAGTTTGGAACAGAACCTGGGGCAGGTGTGAGTCGCTCCCTGTGCCATGCACA
*************************************************.....(((((((((.((.(((.(((((((.((((((((.((((....))))...))))))))))))))).))).)).)))))))))******************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:59 AM