ID:

ocu-mir-223

 Coordinate:

chrX:44537337-44537446 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-67.1 -66.9 -66.5

Sense Strand Reads

GCAGGGCCACATCTTCCAGGAAGATCTCCTCTCCTCATGGAAGGCTCTGGCCTGGCCTCTTGCAGTGCCTCGCTCCGTGTATTTGACAAGCTGAGTTGGACACTCCGTGTGGTAGAGTGTCAGTTTGTCAAATACCCCAAGTGCGGCACATGCTTAGCAGCTCCAGGCCAGGGAAGATGGAGTACCATAAACAGACTGCCTACAAGGATC
***********************************.........(((((((((((.((((.((((((((.((((....((((((((((((((......(((((((.........)))))))))))))))))))))....)))).))))).)))..)).))..)))))))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP		 GSM1528820
Adult_testes
.....................................................................................................................TGTCAGTTTGTCAAATACCCCA....................................................................... 22 0 1 5.00 5 5 0
....................................................................................................................ATGTCAGTTTGTCAAATACCCC........................................................................ 22 1 1 3.00 3 3 0
......................................................................................................................GTCAGTTTGTCAAATACCCC........................................................................ 20 0 1 1.00 1 1 0
.....................................................................................................................TGTCAGTTTGTCAAATACCCC........................................................................ 21 0 1 1.00 1 0 1
....................................................................................................................GTGTCAGTTTGTCAAATACCCCA....................................................................... 23 0 1 1.00 1 1 0
......................................................................................................................GTCAGTTTGTCAAATACCCCAAA..................................................................... 23 1 1 1.00 1 1 0
.....................................................................................................................TGTCAGTTTGGCAAATACCCCA....................................................................... 22 1 1 1.00 1 1 0
.................................................................................................................GGGGTGTCAGTTTGTCAAATACCCCAT...................................................................... 27 3 1 1.00 1 0 1

Anti-sense strand reads

CGTCCCGGTGTAGAAGGTCCTTCTAGAGGAGAGGAGTACCTTCCGAGACCGGACCGGAGAACGTCACGGAGCGAGGCACATAAACTGTTCGACTCAACCTGTGAGGCACACCATCTCACAGTCAAACAGTTTATGGGGTTCACGCCGTGTACGAATCGTCGAGGTCCGGTCCCTTCTACCTCATGGTATTTGTCTGACGGATGTTCCTAG
***********************************.........(((((((((((.((((.((((((((.((((....((((((((((((((......(((((((.........)))))))))))))))))))))....)))).))))).)))..)).))..)))))))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 01:02 AM