ID:

ocu-mir-21a

 Coordinate:

chr19:28514175-28514266 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.4 -44.2 -44.1

Sense Strand Reads

TCCTGCCTGAATGTCTGCTTGTTTTGCTACCGTCGTGACATCTCCATGGCTGTACCACTTTGTCGGATAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACAGCAGTCGATGGGCTGTCTGACATTTTGGTATCTTTCATCTGACCATCCATATCCAATGTTCTCATTCAAACATTACCCAGCT
****************************************************(((((...((((((((((((((((.(((((.(((((.((((.((...))))))))))).)))))))))))))))))))))...)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
...................................................................TAGCTTATCAGACTGATGTTGAC...................................................................................................... 23 0 1 11501.00 11501 11480 21
.......................................................................TTATCAGACTGATGTTGAC...................................................................................................... 19 0 1 1534.00 1534 1534 0
...................................................................TAGCTTATCAGACTGATGTTG........................................................................................................ 21 0 1 1387.00 1387 598 789
...................................................................TAGCTTATCAGACTGATGTT......................................................................................................... 20 0 1 1162.00 1162 660 502
...................................................................TAGCTTATCAGACTGATGTTGA....................................................................................................... 22 0 1 1055.00 1055 636 419
....................................................................AGCTTATCAGACTGATGTTGAC...................................................................................................... 22 0 1 509.00 509 509 0
......................................................................CTTATCAGACTGATGTTGAC...................................................................................................... 20 0 1 272.00 272 272 0
........................................................................TATCAGACTGATGTTGAC...................................................................................................... 18 0 1 194.00 194 194 0
...................................................................TAGCTTATCAGACTGATGT.......................................................................................................... 19 0 1 172.00 172 109 63
.....................................................................GCTTATCAGACTGATGTTGAC...................................................................................................... 21 0 1 108.00 108 108 0
.........................................................................ATCAGACTGATGTTGAC...................................................................................................... 17 0 1 106.00 106 106 0
..................................................................ATAGCTTATCAGACTGATGTTGAC...................................................................................................... 24 0 1 85.00 85 83 2
....................................................................AGCTTATCAGACTGATGTTG........................................................................................................ 20 0 1 73.00 73 32 41
....................................................................AGCTTATCAGACTGATGTTGA....................................................................................................... 21 0 1 68.00 68 39 29
.......................................................................TTATCAGACTGATGTTGA....................................................................................................... 18 0 1 57.00 57 56 1
..................................................................ATAGCTTATCAGACTGATGTTG........................................................................................................ 22 0 1 53.00 53 1 52
..................................................................ATAGCTTATCAGACTGATGTT......................................................................................................... 21 0 1 49.00 49 15 34
...................................................................TAGCTTATCAGACTGATGTTGACT..................................................................................................... 24 0 1 47.00 47 47 0
..................................................................ATAGCTTATCAGACTGATGTTGA....................................................................................................... 23 0 1 45.00 45 16 29
...................................................................TAGCTTATCAGACTGATGTTGAT...................................................................................................... 23 1 1 39.00 39 39 0
....................................................................AGCTTATCAGACTGATGTT......................................................................................................... 19 0 1 37.00 37 20 17
...................................................................TAGCTTATCAGACTGATGTTGACA..................................................................................................... 24 1 1 33.00 33 33 0
...................................................................TAGCTTATCAGACTGATGTTGAA...................................................................................................... 23 1 1 24.00 24 14 10
...................................................................TAGCTTATCAGACTGAT............................................................................................................ 17 0 1 22.00 22 22 0
.......................................................................TTATCAGACTGATGTTG........................................................................................................ 17 0 1 19.00 19 18 1
...................................................................TAGCTTATCCGACTGATGTTGAC...................................................................................................... 23 1 1 16.00 16 16 0
...................................................................TAGCTTATCAGACTGATGTTGACC..................................................................................................... 24 1 1 16.00 16 16 0
.................................................................AATAGCTTATCAGACTGATGTTGAC...................................................................................................... 25 1 1 16.00 16 16 0
.........................................................................................................CAACAGCAGTCGATGGGCTGTC................................................................. 22 0 1 15.00 15 15 0
...................................................................TAGCTTATCAGACTGATTTTGAC...................................................................................................... 23 1 1 14.00 14 14 0
......................................................................CTTATCAGACTGATGTTGA....................................................................................................... 19 0 1 14.00 14 12 2
...................................................................TAGCTTATCAGCCTGATGTTGAC...................................................................................................... 23 1 1 13.00 13 13 0
.........................................................................................................CAACAGCAGTCGATGGGCTGT.................................................................. 21 0 1 11.00 11 11 0
.................................................................AATAGCTTATCAGACTGATGTTG........................................................................................................ 23 1 1 10.00 10 7 3
.....................................................................GCTTATCAGACTGATGTT......................................................................................................... 18 0 1 10.00 10 8 2
...................................................................TAGCTTATCAGACTTATGTTGAC...................................................................................................... 23 1 1 10.00 10 10 0
....................................................................AGCTTATCAGACTGATGT.......................................................................................................... 18 0 1 9.00 9 5 4
....................................................................AGCTTATCAGACTGATGTTGT....................................................................................................... 21 1 1 9.00 9 9 0
...................................................................GAGCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 9.00 9 9 0
..................................................................ATAGCTTATCAGACTGATGT.......................................................................................................... 20 0 1 9.00 9 0 9
...................................................................TAGCTTCTCAGACTGATGTTGAC...................................................................................................... 23 1 1 8.00 8 8 0
...................................................................AAGCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 8.00 8 7 1
...................................................................CAGCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 8.00 8 8 0
....................................................................AGCTTATCAGACTGATGTTGACT..................................................................................................... 23 0 1 8.00 8 8 0
...................................................................TAGCTTATCAGACTGATGCTGAC...................................................................................................... 23 1 1 7.00 7 7 0
......................................................................CTTATCAGACTGATGTTGACT..................................................................................................... 21 0 1 7.00 7 7 0
...................................................................TAGCTTATAAGACTGATGTTGAC...................................................................................................... 23 1 1 7.00 7 7 0
...................................................................TAGCTTATTAGACTGATGTTGAC...................................................................................................... 23 1 1 7.00 7 7 0
..........................................................................TCAGACTGATGTTGAC...................................................................................................... 16 0 5 6.80 34 34 0
..........................................................................................................AACAGCAGTCGATGGGCTGT.................................................................. 20 0 1 6.00 6 6 0
.................................................................AATAGCTTATCAGACTGATGTTGA....................................................................................................... 24 1 1 6.00 6 5 1
...................................................................TAGCTTATCAGACTAATGTTGAC...................................................................................................... 23 1 1 6.00 6 6 0
...................................................................TAGCCTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 6.00 6 6 0
...................................................................TAGCTTATCAGACTGATCTTGAC...................................................................................................... 23 1 1 6.00 6 6 0
......................................................................ATTATCAGACTGATGTTGAC...................................................................................................... 20 1 1 6.00 6 6 0
.................................................................AATAGCTTATCAGACTGATGTT......................................................................................................... 22 1 1 5.00 5 5 0
...................................................................TAGCTTATCAGACTGCTGTTGAC...................................................................................................... 23 1 1 5.00 5 5 0
...................................................................TCGCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 5.00 5 5 0
...................................................................TAGCTTACCAGACTGATGTTGAC...................................................................................................... 23 1 1 5.00 5 5 0
...............................................GGCTGTACCACTTTGTCGGA............................................................................................................................. 20 0 1 5.00 5 5 0
....................................................................AGCTTATCAGACTGATGTTGAT...................................................................................................... 22 1 1 5.00 5 5 0
........................................................................TATCAGACTGATGTTG........................................................................................................ 16 0 1 5.00 5 4 1
.......................................................................TTATCAGACTGATGTTGACT..................................................................................................... 20 0 1 5.00 5 5 0
...........................................................................................................ACAGCAGTCGATGGGCTGTCT................................................................ 21 0 1 5.00 5 5 0
.....................................................................ACTTATCAGACTGATGTTGAC...................................................................................................... 21 1 1 5.00 5 5 0
...................................................................TAGCTTATCAGAATGATGTT......................................................................................................... 20 1 1 5.00 5 5 0
...................................................................TAGCTTATCAGACTGATGTTGAG...................................................................................................... 23 1 1 5.00 5 5 0
......................................................................CTTATCAGACTGATGTT......................................................................................................... 17 0 1 5.00 5 5 0
...................................................................TAGCTTATCAGACTGGTGTTGAC...................................................................................................... 23 1 1 5.00 5 5 0
...................................................................TAGCTTATCACACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCAGACTGATGTCGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCAGACTGATGTTCAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCAGATTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTAGCAGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
.....................................................................GCTTATCAGACTGATGTTGA....................................................................................................... 20 0 1 4.00 4 0 4
...............................................................AAAATAGCTTATCAGACTGATGTTGA....................................................................................................... 26 3 1 4.00 4 4 0
...................................................................TAGCTTAACAGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCAGACCGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCAGACTGACGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATGAGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
..................................................................GTAGCTTATCAGACTGATGTT......................................................................................................... 21 1 1 4.00 4 4 0
...................................................................TAGATTATCAGACTGATGTT......................................................................................................... 20 1 1 4.00 4 4 0
...................................................................TAGCTCATCAGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCAGTCTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGGTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCTGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
...................................................................TAGCTTATCGGACTGATGTTGAC...................................................................................................... 23 1 1 4.00 4 4 0
.......................................................................TTATCAGACTGATGTTGACTGT................................................................................................... 22 0 1 4.00 4 4 0
...........................................................................................................ACAGCAGTCGATGGGCTGTCTTGT............................................................. 24 3 1 4.00 4 4 0
.......................................................................TTATCAGACTGATGTTGAT...................................................................................................... 19 1 3 3.67 11 11 0
...........................................................................CAGACTGATGTTGAC...................................................................................................... 15 0 8 3.63 29 29 0
...................................................................TAGCTTATCAGACTGATGTTGTC...................................................................................................... 23 1 1 3.00 3 3 0
...................................................................TTGCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
...............................................................GGAATAGCTTATCAGACTGATGTTGA....................................................................................................... 26 2 1 3.00 3 0 3
...................................................................TAGCTTATCAGACTCATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
...................................................................TAGCATATCAGACTGATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
..................................................................ATAGCTTATCAGACTGATGTTGACTCGTA................................................................................................. 29 3 1 3.00 3 0 3
.............................................................ATCAAATAGCTTATCAGACTGATGTTGAC...................................................................................................... 29 3 1 3.00 3 3 0
...................................................................TAGCTTATCAGACTGATATTGAC...................................................................................................... 23 1 1 3.00 3 3 0
.................................................................ATTAGCTTATCAGACTGATGTTGA....................................................................................................... 24 2 1 3.00 3 0 3
...................................................................TAGCTTATCAGACTGATG........................................................................................................... 18 0 1 3.00 3 0 3
........................................................................TATCAGACTGATGTTGACT..................................................................................................... 19 0 1 3.00 3 3 0
.........................................................................................................CAACAGCAGTCGATGGGCTG................................................................... 20 0 1 3.00 3 3 0
...................................................................TCGCTTATCAGACTGATGTTG........................................................................................................ 21 1 1 3.00 3 1 2
...................................................................TAGCTTATCAGACTGA............................................................................................................. 16 0 1 3.00 3 3 0
...................................................................TAGCTTATCAGAATGATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
........................................................................TATCAGACTGATGTTGA....................................................................................................... 17 0 1 3.00 3 3 0
...................................................................TAGCTTATCAGGCTGATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
...................................................................TACCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
.....................................................................GCTTATCAGACTGATGTTG........................................................................................................ 19 0 1 3.00 3 2 1
...................................................................TAGCTTATCATACTGATGTTGAC...................................................................................................... 23 1 1 3.00 3 3 0
...................................................................TAGCTTATCACACTGATGTTGA....................................................................................................... 22 1 1 2.00 2 2 0
...................................................................TAGCTTATCAGACTGATGTTTAC...................................................................................................... 23 1 1 2.00 2 2 0
................................................................GAATAGCTTATCAGACTGATGTT......................................................................................................... 23 1 1 2.00 2 0 2
...................................................................TAGCTTATCAGACTGATGTTGT....................................................................................................... 22 1 1 2.00 2 2 0
...................................................................TAGCTTATCAGACTGATGTTGC....................................................................................................... 22 1 1 2.00 2 1 1
..................................................................ATAGCTTATCAGACTGGTGTTGA....................................................................................................... 23 1 1 2.00 2 0 2
..........................................................................................................AACAGCAGTCGATGGGCTGTCT................................................................ 22 0 1 2.00 2 2 0
...................................................................CAGCTTATCAGACTGATGTTG........................................................................................................ 21 1 1 2.00 2 1 1
...................................................................TAGCTTATCAGAGTGATGTTGAC...................................................................................................... 23 1 1 2.00 2 2 0
...................................................................TAGCTTATCGGACTGATGT.......................................................................................................... 19 1 1 2.00 2 2 0
..................................................................CTAGCTTATCAGACTGATGTTGAC...................................................................................................... 24 1 1 2.00 2 2 0
..................................................................ATAGCTTATCAGACTGATGTTGACA..................................................................................................... 25 1 1 2.00 2 2 0
.........................................................................ATCAGACTGATGTTGACT..................................................................................................... 18 0 1 2.00 2 2 0
...................................................................TAGTTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 2.00 2 2 0
.......................................................................TTATCAGCCTGATGTTGAC...................................................................................................... 19 1 2 2.00 4 4 0
...................................................................TAGCTTATCAGACTTATGTT......................................................................................................... 20 1 1 2.00 2 2 0
...................................................................TAGCTTATCAGACTGATGTTAAC...................................................................................................... 23 1 1 2.00 2 2 0
...................................................................TAGTTTATCAGACTGATGTTG........................................................................................................ 21 1 1 2.00 2 1 1
...................................................................TAGCTTATCAGACTGATGTTC........................................................................................................ 21 1 1 2.00 2 1 1
...................................................................TATCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 2.00 2 2 0
...................................................................TAGCTTGTCAGACTGATGTTGAC...................................................................................................... 23 1 1 2.00 2 2 0
.........................................................................ATCAGACTGATGTTGA....................................................................................................... 16 0 2 2.00 4 3 1
...................................................................TAGCTTATCAGACTGATGTTGACG..................................................................................................... 24 1 1 2.00 2 1 1
.......................................................................TTATCAGACTGATATTGAC...................................................................................................... 19 1 1 2.00 2 2 0
..........................................................................................................AACAGCAGTCGATGGGCTGTCTTT.............................................................. 24 2 1 2.00 2 2 0
...................................................................TAGCTTATCAGACTGTTGTTGAC...................................................................................................... 23 1 1 2.00 2 2 0
...................................................................TAGCTTATCAGACTGATGCTG........................................................................................................ 21 1 1 2.00 2 1 1
...................................................................TAGCTTATCCGACTGATGTT......................................................................................................... 20 1 1 2.00 2 2 0
....................................................................AGATTATCAGACTGATGTTGAC...................................................................................................... 22 1 1 2.00 2 2 0
...................................................................TAGCTTATCAGACTGATGTTGCC...................................................................................................... 23 1 1 2.00 2 2 0
.........................................................................................................CAACAGCAGTCGATGGGCTGTAA................................................................ 23 2 1 2.00 2 2 0
..............................................................GTTGATAGCTTATCAGACTGAT............................................................................................................ 22 3 11 1.82 20 20 0
...............................................................TTGATAGCTTATCAGACTGAT............................................................................................................ 21 2 2 1.50 3 3 0
.......................................................................TTATCAGACTGATGTT......................................................................................................... 16 0 4 1.25 5 5 0
.............................................................GTTGACTAGCTTATCAGACTGAT............................................................................................................ 23 3 5 1.20 6 6 0
..................................................................GTAGCTTATCAGACTGATGTTGA....................................................................................................... 23 1 1 1.00 1 1 0
...................................................................TAGCTTATGAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 1 0
........................................................................TATCCGACTGATGTTGAC...................................................................................................... 18 1 1 1.00 1 1 0
...................................................................TAGCTTATCAAACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGTTGACTGT................................................................................................... 26 0 1 1.00 1 0 1
...................................................................TAGCTTATCAGATTGATGTTG........................................................................................................ 21 1 1 1.00 1 0 1
...............................................................AGCTTAGCTTATCAGACTGATGTT......................................................................................................... 24 3 1 1.00 1 0 1
...................................................................TAGATTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 1.00 1 1 0
...................................................................TAGCTTATCATACTGATGTTGACC..................................................................................................... 24 2 1 1.00 1 1 0
...............................................................CTGATAGCTTATCAGACTGATGTT......................................................................................................... 24 1 1 1.00 1 0 1
......................................................................CTTATCAGGCTGATGTTGAC...................................................................................................... 20 1 1 1.00 1 1 0
...................................................................TAGCGTATCAGACTGATGTTG........................................................................................................ 21 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTAATGTTG........................................................................................................ 21 1 1 1.00 1 1 0
....................................................................AGCTTATCGGACTGATGTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
.....................................................................GCTTCTCAGACTGATGTTGAC...................................................................................................... 21 1 1 1.00 1 1 0
...................................................................TGGCTTATCAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 1 0
................................................................GCTTAGCTTATCAGACTGATGTTG........................................................................................................ 24 2 1 1.00 1 0 1
...................................................................TAGCTTGTCAGACTGATGTTG........................................................................................................ 21 1 1 1.00 1 0 1
.......................................................................TTATCAGACTAATGTTGAC...................................................................................................... 19 1 1 1.00 1 1 0
...............................................................AGTTTAGCTTATCAGACTGATGTT......................................................................................................... 24 3 2 1.00 2 0 2
.....................................................................GCTTATCAGACTGATGTCGAC...................................................................................................... 21 1 1 1.00 1 1 0
..................................................................TTAGCTTATCAGACTGATGTTG........................................................................................................ 22 1 1 1.00 1 0 1
...................................................................TAGCTTAGCAGACTGATGTTG........................................................................................................ 21 1 1 1.00 1 0 1
...................................................................GAGCTTATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGAGGTTGAC...................................................................................................... 23 1 1 1.00 1 1 0
......................................................................CTCATCAGACTGATGTTGAC...................................................................................................... 20 1 1 1.00 1 1 0
...................................................................TAGCTTATCCGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 0 1
....................................................................AGCTTATCAGACTGATTTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
.......................................................................TTACCAGACTGATGTTGAC...................................................................................................... 19 1 1 1.00 1 1 0
...................................................................GAGCTTATCAGACTGATGTTG........................................................................................................ 21 1 1 1.00 1 1 0
..................................................................GAAGCTTATCAGACTGATGTTGA....................................................................................................... 23 2 1 1.00 1 1 0
.................................................................ATTAGCTTATCAGACTGATGTT......................................................................................................... 22 2 2 1.00 2 0 2
...................................................................AAGCTTATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGTTGAAA..................................................................................................... 24 2 1 1.00 1 0 1
....................................................................AGCTTGTCAGACTGATGTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
...................................................................CAGCTTATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGTTGACTGTGCT................................................................................................ 29 3 1 1.00 1 0 1
...................................................................TAGCTTATCAGGCTGATGTTGAA...................................................................................................... 23 2 1 1.00 1 1 0
....................................................................AGCTTATAAGACTGATGTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
................................................................AACTAGCTTATCAGACTGATGTTG........................................................................................................ 24 3 1 1.00 1 0 1
.........................................................................................................CAACAGCAGTCGATGGGCTGA.................................................................. 21 1 1 1.00 1 0 1
...................................................................AAGCTTATCAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGATTTTGA....................................................................................................... 22 1 1 1.00 1 1 0
.......................................................................TTATCAGACTGATGTTGACC..................................................................................................... 20 1 1 1.00 1 1 0
....................................................................AGCTTATCATACTGATGTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
.............................................................ATCGGATAGCTTATCAGACTGATGTT......................................................................................................... 26 1 1 1.00 1 0 1
....................................................................ACCTTATCAGACTGATGTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
......................................................................CTTATCATACTGATGTTGAC...................................................................................................... 20 1 1 1.00 1 1 0
...................................................................TATCTTATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...............................................................GGAATAGCTTATCAGACTGATGTTGACT..................................................................................................... 28 2 1 1.00 1 0 1
...................................................................TAGCTTATCAGACCGATGT.......................................................................................................... 19 1 1 1.00 1 0 1
.......................................................................TTATCGGACTGATGTTGAC...................................................................................................... 19 1 1 1.00 1 1 0
....................................................................AGCTTATCAGACTGATGTTGAA...................................................................................................... 22 1 1 1.00 1 0 1
..................................................................ATAGCTTATCAGACTGATGGT......................................................................................................... 21 1 1 1.00 1 0 1
.................................................................AGTAGCTTATCAGACTGATGTT......................................................................................................... 22 2 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGATGTTT........................................................................................................ 21 1 1 1.00 1 1 0
..............................................................TCGAATAGCTTATCAGACTGATGTT......................................................................................................... 25 1 1 1.00 1 0 1
...................................................................TGGCTTATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
.........................................................................................................CAACAGCAGTCGATGGGCTGTCAT............................................................... 24 2 1 1.00 1 0 1
..................................................................ATAGCTTATCAGCCTGATGTTGA....................................................................................................... 23 1 1 1.00 1 1 0
.................................................................AATAGCTTATCAGACTGATGT.......................................................................................................... 21 1 1 1.00 1 0 1
......................................................................CTTATCAGTCTGATGTTGAC...................................................................................................... 20 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGTTGACTTCGGA................................................................................................ 29 3 1 1.00 1 0 1
..................................................................ATAGCTTATCAGCCTGATGTT......................................................................................................... 21 1 1 1.00 1 1 0
.............................................................CTCCAATAGCTTATCAGACTGATGTTG........................................................................................................ 27 3 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGAAGTTGAC...................................................................................................... 23 1 1 1.00 1 1 0
...................................................................TAGCTAATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGATGTTGACTG.................................................................................................... 25 0 1 1.00 1 0 1
...............................................................GTGATAGCTTATCAGACTGATGTT......................................................................................................... 24 2 1 1.00 1 0 1
....................................................................AGCTTATCAGACTGATGTTGACTG.................................................................................................... 24 0 1 1.00 1 0 1
.........................................................................ATCAGACTGATGTTG........................................................................................................ 15 0 6 1.00 6 6 0
...................................................................TAGCGTATCAGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACCGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...............................................................GGAATAGCTTATCAGACTGATGTTG........................................................................................................ 25 2 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGATGTTGGC...................................................................................................... 23 1 1 1.00 1 1 0
......................................................................CTTATCAGACTGATGTTG........................................................................................................ 18 0 1 1.00 1 0 1
...........................................................CTGTGGGTTAGCTTATCAGACTGATGTT......................................................................................................... 28 3 1 1.00 1 0 1
....................................................................AGCTTATCAGACTGATGTTGATCGTA.................................................................................................. 26 3 1 1.00 1 0 1
.................................................................ACTAGCTTATCAGACTGATGTT......................................................................................................... 22 2 1 1.00 1 0 1
.......................................................................TTATCCGACTGATGTTGAC...................................................................................................... 19 1 1 1.00 1 1 0
..................................................................ATAGCTTATCAGACTGATGCT......................................................................................................... 21 1 1 1.00 1 0 1
................................................................GTCTAGCTTATCAGACTGATGTT......................................................................................................... 23 2 1 1.00 1 0 1
..............................................................TAAAATAGCTTATCAGACTGATGTT......................................................................................................... 25 3 1 1.00 1 0 1
..............................................................TTGCGTAGCTTATCAGACTGATGTT......................................................................................................... 25 3 1 1.00 1 0 1
...............................................................CATCTAGCTTATCAGACTGATGTTGAC...................................................................................................... 27 3 1 1.00 1 1 0
...................................................................GAGCTTATCAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 1 0
...................................................................TAGCTTATCGGACTGATGTTGA....................................................................................................... 22 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGGTGA....................................................................................................... 22 1 1 1.00 1 1 0
....................................................................AGCTTCTCAGACTGATGTTGAC...................................................................................................... 22 1 1 1.00 1 1 0
.........................................................................................................CAACAGCAGTCGATGGGCTGTA................................................................. 22 1 1 1.00 1 0 1
...................................................................TAGCTTATCGGACTGATGTTGACA..................................................................................................... 24 2 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGCT......................................................................................................... 20 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGATGTTGACTGTTGAAT.............................................................................................. 31 0 1 1.00 1 1 0
................................................................GAATAGCTTATCAGACTGATGT.......................................................................................................... 22 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGGTGTTG........................................................................................................ 21 1 1 1.00 1 1 0
...................................................................TCGCTTATCAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 1 0
.......................................................................TTATCAGACTGATGTTGACA..................................................................................................... 20 1 2 1.00 2 2 0
...................................................................TAGCTTCTCAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATCTT......................................................................................................... 20 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTGATGTG......................................................................................................... 20 1 1 1.00 1 0 1
.....................................................................TCTTATCAGACTGATGTTGAC...................................................................................................... 21 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGATGA....................................................................................................... 22 1 1 1.00 1 1 0
...................................................................CAGCTTATCAGACTGATGTT......................................................................................................... 20 1 1 1.00 1 0 1
...................................................................TAGCTTATCAGACTCATGTT......................................................................................................... 20 1 1 1.00 1 0 1
..................................................................ATAGCTTATCAGACTGATGTTGAA...................................................................................................... 24 1 1 1.00 1 0 1
.......................................................................TTATCAGACTGATGTTTAC...................................................................................................... 19 1 1 1.00 1 1 0
...................................................................TGGCTTATCAGACTGATGTTGAC...................................................................................................... 23 1 1 1.00 1 1 0
...................................................................TAGCTTCTCCGACTGATGTTGAC...................................................................................................... 23 2 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGTTA........................................................................................................ 21 1 1 1.00 1 1 0
...................................................................TAGCTTATCAGACTGATGTTGACTGA................................................................................................... 26 1 1 1.00 1 0 1
..................................................................ATAGCTTATCAGACTGATGGTGAC...................................................................................................... 24 1 1 1.00 1 1 0
......................................................................CTTATCAGACTGATGCTGAC...................................................................................................... 20 1 2 1.00 2 2 0
........................................................................TATCAGACTGATGTTGAT...................................................................................................... 18 1 4 0.75 3 3 0
.......................................................................TTATCAGACTGATTTTGAC...................................................................................................... 19 1 3 0.67 2 2 0
...................................................................TAGCTTATCAGACTGATTTT......................................................................................................... 20 1 3 0.67 2 2 0
....................................................................AGCTTATCAGACTGAT............................................................................................................ 16 0 14 0.50 7 7 0
.......................................................................TTATCAGACTGGTGTTGAC...................................................................................................... 19 1 2 0.50 1 1 0
.......................................................................TTATCATACTGATGTTGAC...................................................................................................... 19 1 2 0.50 1 1 0
.......................................................................TTATCAGACTGATGTTGAA...................................................................................................... 19 1 2 0.50 1 1 0
...................................................................TAGCTTATAAGACTGATGT.......................................................................................................... 19 1 2 0.50 1 1 0
...............................................................ACTATAGCTTATCAGACTGATGTTG........................................................................................................ 25 3 2 0.50 1 0 1
....................................................................AGATTCTCAGACTGATGTTGAC...................................................................................................... 22 2 2 0.50 1 1 0
................................................................GACTAGCTTATCAGACTGATG........................................................................................................... 21 2 2 0.50 1 0 1
....................................................................AGCTTATCAGACTGAAGTT......................................................................................................... 19 1 2 0.50 1 1 0
.........................................................................................................CAACAGCAGTCGATG........................................................................ 15 0 2 0.50 1 1 0
.............................................................GTTGCTTAGCTTATCAGACTGATGT.......................................................................................................... 25 3 2 0.50 1 0 1
..............................................................GTCGATAGCTTATCAGACTGAT............................................................................................................ 22 3 2 0.50 1 1 0
...................................................................TTGCTTATCAGACTGATGTT......................................................................................................... 20 1 2 0.50 1 1 0
...................................................................TAGCTTATAAGACTGATGTTG........................................................................................................ 21 1 2 0.50 1 0 1
......................................................................ATTATCAGACTGATGTTG........................................................................................................ 18 1 4 0.50 2 2 0
.......................................................................TTATCAGACTGATGTTGGC...................................................................................................... 19 1 2 0.50 1 1 0
...................................................................TAGGTTATCAGACTGATGT.......................................................................................................... 19 1 2 0.50 1 1 0
..................................................................ATAGATTATCAGACTGATGT.......................................................................................................... 20 1 2 0.50 1 0 1
.....................................................................CCTTATCAGACTGATGTTGAC...................................................................................................... 21 1 2 0.50 1 1 0
.......................................................................TTATCAGGCTGATGTTGAC...................................................................................................... 19 1 2 0.50 1 1 0
.................................................................AATAGCTTGTCAGACTGATGTT......................................................................................................... 22 2 2 0.50 1 1 0
...................................................................TAGCTTATCAGACTAATGT.......................................................................................................... 19 1 2 0.50 1 1 0
.......................................................................TTATCAGACTCATGTTGAC...................................................................................................... 19 1 2 0.50 1 1 0
.......................................................................TTATCAGACTGACGTTGAC...................................................................................................... 19 1 3 0.33 1 1 0
.....................................................................GCTTATCTGACTGATGTTGTC...................................................................................................... 21 2 3 0.33 1 1 0
...................................................................TAGCTTTTCAGACTGATGTTGAT...................................................................................................... 23 2 3 0.33 1 1 0
...................................................................AATCTTATCAGACTGATGTTG........................................................................................................ 21 2 3 0.33 1 0 1
.......................................................................TCATCAGACTGATGTTGAC...................................................................................................... 19 1 3 0.33 1 1 0
.......................................................................TTATCAGATTGATGTTGAC...................................................................................................... 19 1 3 0.33 1 1 0
...................................................................TAGCTTATCAGACTGATTT.......................................................................................................... 19 1 3 0.33 1 1 0
...................................................................TAGCTTATCAGACTGATT........................................................................................................... 18 1 3 0.33 1 1 0
.........................................................................ATCAGACTGATGTTGACC..................................................................................................... 18 1 10 0.30 3 3 0
...............................................................AATATAGCTTATCAGACTGATGTT......................................................................................................... 24 3 4 0.25 1 0 1
......................................................................ATTATCAGACTGATGTTGA....................................................................................................... 19 1 4 0.25 1 1 0
.......................................................................TTATCAGACTGATGCTGAC...................................................................................................... 19 1 4 0.25 1 1 0
.........................................................................................................CAACAGCAGTCGATGGGCTGAAA................................................................ 23 3 4 0.25 1 0 1
...............................................................AAGTTAGCTTATCAGACTGATGT.......................................................................................................... 23 3 4 0.25 1 0 1
........................................................................TATCAGACTGATGTT......................................................................................................... 15 0 4 0.25 1 1 0
.......................................................................TTATCAGACTGATGTTGAG...................................................................................................... 19 1 4 0.25 1 1 0
.......................................................................TTATCAGACTGCTGTTGAC...................................................................................................... 19 1 5 0.20 1 1 0

Anti-sense strand reads

AGGACGGACTTACAGACGAACAAAACGATGGCAGCACTGTAGAGGTACCGACATGGTGAAACAGCCTATCGAATAGTCTGACTACAACTGACAACTTAGAGTACCGTTGTCGTCAGCTACCCGACAGACTGTAAAACCATAGAAAGTAGACTGGTAGGTATAGGTTACAAGAGTAAGTTTGTAATGGGTCGA
**************************************************(((((...((((((((((((((((.(((((.(((((.((((.((...))))))))))).)))))))))))))))))))))...)))))..**************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:39 AM