ID:

ocu-mir-219a-2

 Coordinate:

chrUn0149:254864-254960 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-60.4 -60.4 -60.4
mature
  1. chr12:23632838-23632858 +
  2. chrUn0149:254882-254902 +
star

Sense Strand Reads

AGGTGCTTCTGAGGAGCGAAGCGGAACCCCGCAAGAAGCTGGGGCCCTGAACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGGCCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCTGGGCACAGCAGGGTCGGGGGCTGCAGGAACAGCGCTCAGCACGGGCGAGAACC
***********************************.......(((((((..(((((((.(((.(((((.(((.(((((..(((((((((((.....(((...)))....)))))))))))..)))))))).))))).)))))))))).....)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
....................................................................TGATTGTCCAAACGCAATTCT............................................................................................................ 21 0 2 5.00 10 9 1
.......................................................................TTGTCCAAACGCAATTCTTG.......................................................................................................... 20 0 1 2.00 2 2 0
....................................................................TGATTGTCCAAACGCAATTCTTGT......................................................................................................... 24 0 1 1.00 1 1 0
....................................................................TGATTGTCCAAACGCAATT.............................................................................................................. 19 0 2 0.50 1 1 0

Anti-sense strand reads

TCCACGAAGACTCCTCGCTTCGCCTTGGGGCGTTCTTCGACCCCGGGACTTGAGTCCCCGAAGCGGTGACTAACAGGTTTGCGTTAAGAACATGCTCAGACGCCGGTTGGCTCTTAACACCGACCTGTAGACACCGACTCGAGACCCGTGTCGTCCCAGCCCCCGACGTCCTTGTCGCGAGTCGTGCCCGCTCTTGG
***********************************.......(((((((..(((((((.(((.(((((.(((.(((((..(((((((((((.....(((...)))....)))))))))))..)))))))).))))).)))))))))).....)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:56 AM