ID:

ocu-mir-219a-1

 Coordinate:

chr12:23632818-23632927 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-77.7 -77.3 -77.3
mature
  1. chr12:23632838-23632858 +
  2. chrUn0149:254882-254902 +
star

Sense Strand Reads

TCTCCATTCCCCCCACCCCCCACCTCCCCGTTCCTCCCGTGCGCTCCCTCCCGCCGCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCGAGTCTATGGCTCCGGCCGAGAGTTGGGTTTGGACGTCCCGAGCCGCTGCCCCCAGACCTCGAGGGGGAGAGCGGGTCGGAGGGCCCAGGGGGAGCCAGGGCGGAGGCTGGAGCAAGT
***********************************(((((...(((((((.......((((.(((((((..(((.((((((((.(((((((((.(((.........)))))))))))).)))))))))))..))))))).)))).........)))))))...))))).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
......................................................................TGATTGTCCAAACGCAATTCT....................................................................................................................... 21 0 2 5.00 10 9 1
......................................................................TGATTGTCCAAACGCAATTCTC...................................................................................................................... 22 0 1 1.00 1 1 0
......................................................................TGATTGTCCAAACGCAATT......................................................................................................................... 19 0 2 0.50 1 1 0

Anti-sense strand reads

AGAGGTAAGGGGGGTGGGGGGTGGAGGGGCAAGGAGGGCACGCGAGGGAGGGCGGCGCCCGGCGCCGAGGACTAACAGGTTTGCGTTAAGAGCTCAGATACCGAGGCCGGCTCTCAACCCAAACCTGCAGGGCTCGGCGACGGGGGTCTGGAGCTCCCCCTCTCGCCCAGCCTCCCGGGTCCCCCTCGGTCCCGCCTCCGACCTCGTTCA
***********************************(((((...(((((((.......((((.(((((((..(((.((((((((.(((((((((.(((.........)))))))))))).)))))))))))..))))))).)))).........)))))))...))))).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:30 AM