ID:

ocu-mir-218-1

 Coordinate:

chr2:11156682-11156791 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.8 -48.7 -48.5
mature
  1. chr2:11156706-11156724 +
  2. chr3:50155781-50155799 -
star

Sense Strand Reads

CCTCCCTTCATTTTCCTCTTGGTCTTACCTTTGGCCTAGTGGTTGGTGTAGTGATAATGTAGCGAGATTTTCTGTTGTGCTTGATCTAACCATGTGGTTGCGAGGTATGAGTAAAACATGGTTCCGTCAAGCACCATGGAACGTCACGCAGCTTTCTACAGCATGACAAGCTGCTGAGGCTTAAATCAGGATTTACTTGTCTCTTTATAA
***********************************..((((((((.(((((.((....((.(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).))).)))).))))).))......))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
..........................................................................TTGTGCTTGATCTAACCAT..................................................................................................................... 19 0 2 7.00 14 14 0
.....................................................................................................................ATGGTTCCGTCAAGCACCATGT....................................................................... 22 1 1 3.00 3 3 0
..........................................................................TTGTGCTTGATCTAACCATGTGGT................................................................................................................ 24 0 2 1.00 2 2 0
....................................................................................................................CATGGTTCCGTCAAGCACCATGT....................................................................... 23 1 1 1.00 1 1 0
.......................................................................GAATTGTGCTTGATCTAACCATGT................................................................................................................... 24 3 2 0.50 1 0 1
..........................................................................TTGTGCTTGATCTAACCATGT................................................................................................................... 21 0 2 0.50 1 0 1

Anti-sense strand reads

GGAGGGAAGTAAAAGGAGAACCAGAATGGAAACCGGATCACCAACCACATCACTATTACATCGCTCTAAAAGACAACACGAACTAGATTGGTACACCAACGCTCCATACTCATTTTGTACCAAGGCAGTTCGTGGTACCTTGCAGTGCGTCGAAAGATGTCGTACTGTTCGACGACTCCGAATTTAGTCCTAAATGAACAGAGAAATATT
***********************************..((((((((.(((((.((....((.(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).))).)))).))))).))......))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:41 AM