ID:

ocu-mir-190b

 Coordinate:

chr13:38367196-38367274 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.6 -37.8 -37.8

Sense Strand Reads

CTTGCTTTGCAGTGGGGAGGAAGGCAGAGGACCAGCAAAGCCCTCCTGCCTGCTTCTGTGTGATATGTTTGATATTGGGTTGTTTAATTAGGAACCAACTAAATGTCAAACATATTCTTATAGCAGTAGGCAATTCTGCATCACCCTCGTTCCTCAACCTATGGAACTCGGGGACTCCT
*********************************************.((((((((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))))))))*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
............................................................TGATATGTTTGATATTGGGT................................................................................................... 20 0 1 24.00 24 8 16
............................................................TGATATGTTTGATATTGGGTTG................................................................................................. 22 0 1 23.00 23 23 0
............................................................TGATATGTTTGATATTGGGTT.................................................................................................. 21 0 1 10.00 10 3 7
............................................................TGATATGTTTGATATTGGGTTGT................................................................................................ 23 0 1 7.00 7 7 0
.............................................................GATATGTTTGATATTGGGTTG................................................................................................. 21 0 1 4.00 4 4 0
............................................................TGATATGTTTGATATTGGGTTGTT............................................................................................... 24 0 1 3.00 3 3 0
...........................................................ATGATATGTTTGATATTGGGTT.................................................................................................. 22 1 1 3.00 3 0 3
...........................................................ATGATATGTTTGATATTGGGTTGT................................................................................................ 24 1 1 3.00 3 3 0
............................................................TGATATGTTTGATATTGGGTTGA................................................................................................ 23 1 1 1.00 1 1 0
..................................................................GTTTGATATTGGGTTGT................................................................................................ 17 0 2 1.00 2 2 0
...........................................................ATGATATGTTTGATATTGGGT................................................................................................... 21 1 1 1.00 1 0 1
............................................................TGATGTGTTTGATATTGGGTTG................................................................................................. 22 1 1 1.00 1 1 0
.................................................................................................ACTAAATGTCAAACATATTC.............................................................. 20 0 1 1.00 1 0 1
............................................................TGATATGCTTGATATTGGGTTG................................................................................................. 22 1 1 1.00 1 1 0
..................................................................GTTTGATATTGGGTTG................................................................................................. 16 0 3 0.67 2 2 0
............................................................TGATATGTTTGATATTGGGTTA................................................................................................. 22 1 2 0.50 1 1 0

Anti-sense strand reads

GAACGAAACGTCACCCCTCCTTCCGTCTCCTGGTCGTTTCGGGAGGACGGACGAAGACACACTATACAAACTATAACCCAACAAATTAATCCTTGGTTGATTTACAGTTTGTATAAGAATATCGTCATCCGTTAAGACGTAGTGGGAGCAAGGAGTTGGATACCTTGAGCCCCTGAGGA
***********************************************.((((((((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))))))))********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:31 AM