ID:

ocu-mir-1843a

 Coordinate:

chr13:3109399-3109463 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-23.9 -23.9 -23.7

Sense Strand Reads

TGGACAAAAGAGAAAAATCCCTTTGTCTGCAGCAGGCAGCGATCCTACATAAACATGGAGGTCTCTGTCGGACTTAGGACAGCTGGCTAAGTCTGATCGTTCCCCTCCATACAGCTTTGACATCCAATCACTCTAAATGCTGCTCTCCTTACCATTTTTTTTTTT
***************************************...............(((((((.....(((((((((((.........)))))))))))......)))))))....................*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
......................................................ATGGAGGTCTCTGTCGGAC............................................................................................ 19 0 1 6.00 6 6 0
.....................................................CATGGAGGTCTCTGTCGGAC............................................................................................ 20 0 1 5.00 5 5 0
....................................................ACATGGAGGTCTCTGTCGGAC............................................................................................ 21 0 1 3.00 3 3 0
..................................................................................CTGGCTAAGTCTGATCGTTCCCCTCCATACAGC.................................................. 33 0 1 3.00 3 3 0
....................................................ACATGGAGGTCTCTGTCGGACT........................................................................................... 22 0 1 3.00 3 3 0
....................................................ACATGGAGGTCTCTGTCGGA............................................................................................. 20 0 1 3.00 3 3 0
.....................................................CATGGAGGTCTCTGTCGGACT........................................................................................... 21 0 1 2.00 2 1 1
......................................................ATGGAGGTCTCTGTCGGACTTA......................................................................................... 22 0 1 1.00 1 1 0
......................................................ATGGAGGTCTCTGTCTGACTT.......................................................................................... 21 1 1 1.00 1 1 0
.....................................................CATGGAGGTCTCTGTCGGA............................................................................................. 19 0 1 1.00 1 0 1

Anti-sense strand reads

ACCTGTTTTCTCTTTTTAGGGAAACAGACGTCGTCCGTCGCTAGGATGTATTTGTACCTCCAGAGACAGCCTGAATCCTGTCGACCGATTCAGACTAGCAAGGGGAGGTATGTCGAAACTGTAGGTTAGTGAGATTTACGACGAGAGGAATGGTAAAAAAAAAAA
***********************************...............(((((((.....(((((((((((.........)))))))))))......)))))))....................*************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:31 AM