ID:

ocu-mir-146a

Coordinate:

chr3:41906606-41906670 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-36.6	-36.2

Sense Strand Reads

GGCAAGGAAGGGGGCTGTGTGCCGTCACTGGAAAGCCTATGTGTATCCTCAGCTTTGAGAACTGAATTCCATGGGTTGTGTCAGTGTCAGACCTGTGAAATTTAGTTCTTCAGCTGGGATATCTCTGTCATCATGGACGTGAGGGTCACTGGAGAGAGAGATCCT *********************************.......((((((.(((((..((((((((((((.((((((((.((.......)))))))))).)))))))))))).)))))))))))........*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528820 Adult_testes	GSM1528821 Adult_testes_Mili_IP
.......................................................TGAGAACTGAATTCCATGGGT.........................................................................................	21	0	1	23.00	23	14	9
.......................................................TGAGAACTGAATTCCATGGGTT........................................................................................	22	0	1	22.00	22	16	6
......................................................ATGAGAACTGAATTCCATGGGTT........................................................................................	23	1	1	5.00	5	5	0
.......................................................TGAGAACTGAATTCCATGGG..........................................................................................	20	0	1	3.00	3	1	2
......................................................ATGAGAACTGAATTCCATGGGT.........................................................................................	22	1	1	2.00	2	0	2
.......................................................TGAGAACTGAATTCCATGGGTAT.......................................................................................	23	2	2	1.50	3	3	0
.......................................................TGAGAACTGAATTCCAGGGGTT........................................................................................	22	1	1	1.00	1	0	1
.......................................................TGAGAACTGAATTCCATGG...........................................................................................	19	0	1	1.00	1	0	1
........................................................GAGAACTGAATTCCATGGGT.........................................................................................	20	0	1	1.00	1	0	1
...................................................GTTCTGAGAACTGAATTCCATGGG..........................................................................................	24	2	2	0.50	1	0	1
......................................................ATCGGAACTGAATTCCATGGGTT........................................................................................	23	3	3	0.33	1	0	1
..............................................................TGAATTCCATGGGTT........................................................................................	15	0	15	0.07	1	0	1

Anti-sense strand reads

CCGTTCCTTCCCCCGACACACGGCAGTGACCTTTCGGATACACATAGGAGTCGAAACTCTTGACTTAAGGTACCCAACACAGTCACAGTCTGGACACTTTAAATCAAGAAGTCGACCCTATAGAGACAGTAGTACCTGCACTCCCAGTGACCTCTCTCTCTAGGA *********************************.......((((((.(((((..((((((((((((.((((((((.((.......)))))))))).)))))))))))).)))))))))))........*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 05/16/2015 at 12:43 AM