ID:

ocu-mir-139

 Coordinate:

chr1:143799353-143799420 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.2 -48.2 -48.2

Sense Strand Reads

GTGCGCAGCGCGCAGGTCCACTGGCCAGGGAGGCGCCGGACCGGGCTCAGGTGTACTCTACAGTGCACGTGTCTCCAGTGTGGCTTGGAGGCTGGAGACGCGGCCCTGTTGGAGTAACAACTGAAGCCGGAGGCTGCGGAGGGCACCGGAGGCAGGGCCGGGCGAGGG
*****************************************..(((((((.((((((((((((.((.((((((((((((...........)))))))))))))).))).)))))).))).))).)))).*************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes		 GSM1528821
Adult_testes_Mili_IP
........................................................TCTACAGTGCACGTGTCTCCA........................................................................................... 21 0 1 4.00 4 2 2
........................................................TCTACAGTGCACGTGTCTCC............................................................................................ 20 0 1 2.00 2 2 0
.........................................................CTACAGTGCACGTGTCTCCA........................................................................................... 20 0 1 1.00 1 0 1
............................................................................................TGGAGACGCGGCCCTGTTGGAG...................................................... 22 0 1 1.00 1 1 0
................................GCGGCGGACCGGGCTCA....................................................................................................................... 17 1 5 0.40 2 2 0

Anti-sense strand reads

CACGCGTCGCGCGTCCAGGTGACCGGTCCCTCCGCGGCCTGGCCCGAGTCCACATGAGATGTCACGTGCACAGAGGTCACACCGAACCTCCGACCTCTGCGCCGGGACAACCTCATTGTTGACTTCGGCCTCCGACGCCTCCCGTGGCCTCCGTCCCGGCCCGCTCCC
***************************************..(((((((.((((((((((((.((.((((((((((((...........)))))))))))))).))).)))))).))).))).)))).***************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:28 AM