ID:

ocu-mir-135a-2

Coordinate:

chr4:76791364-76791463 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-33.2	-33.2	-33.2

mature

star

Sense Strand Reads

TTGAAATAGTTGTGAAGTCATGTGAAGAAAATAAGTTTTGCATCCGACCAAGATAAATTCACTCTAGTGCTTTATGGCTTTTTATTCCTATGTGATAGTAATAAAGTCTCATGTAGGGATGGAAGCCATGAAATACATTGTGAAAAATCATCAACTGAGAAGGGGCCATCAGTATAGAGAACGTTAGCCTGTGGAGCTGT *******************************************************(((((....(((.((((((((((((.((((((((((((.............)))))))))))))))))))))))).)))...)))))...***************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528821 Adult_testes_Mili_IP	GSM1528820 Adult_testes
........................................................................TATGGCTTTTTATTCCTATGT...........................................................................................................	21	0	2	35.50	71	28	43
.......................................................................ATATGGCTTTTTATTCCTATGT...........................................................................................................	22	1	2	13.00	26	26	0
........................................................................TATGGCTTTTTATTCCTATGTGA.........................................................................................................	23	0	2	10.00	20	0	20
.......................................................................ATATGGCTTTTCATTCCTATGTGATCGTA....................................................................................................	29	3	1	6.00	6	6	0
........................................................................TATGGCTTTTTATTCCTATGTG..........................................................................................................	22	0	2	4.00	8	7	1
...............................................................................................................TGTAGGGATGGAAGCCATGAA....................................................................	21	0	1	4.00	4	0	4
........................................................................TATGGCTTTTTATTCCTAT.............................................................................................................	19	0	2	3.00	6	5	1
.........................................................................ATGGCTTTTTATTCCTATGT...........................................................................................................	20	0	2	2.00	4	0	4
.......................................................................TTATGGCTTTTTATTCCTATGTGATCGTA....................................................................................................	29	1	1	1.00	1	1	0
........................................................................TATGGCTTTTTATTCCTATGTGT.........................................................................................................	23	1	2	1.00	2	0	2
........................................................................TATGGCTTTTTATTCCTATGTGAT........................................................................................................	24	0	2	1.00	2	0	2
.......................................................................TTATGGCTTTTTATTCCTATGT...........................................................................................................	22	0	1	1.00	1	1	0
........................................................................TATGGCTTTTTATTCCTATGTGAA........................................................................................................	24	1	2	1.00	2	0	2
......................................................................GATATGGCTTTTTATTCCTATGT...........................................................................................................	23	2	2	1.00	2	0	2
........................................................................TATGGCTTTTTATTCCTATG............................................................................................................	20	0	2	1.00	2	2	0
.......................................................................ATATGGCTTTTTATTCCTATG............................................................................................................	21	1	2	0.50	1	1	0
..........................................................................TGGCTTTTTATTCCTATGT...........................................................................................................	19	0	2	0.50	1	0	1
........................................................................GATGGCTTTTTATTCCTATGT...........................................................................................................	21	1	2	0.50	1	1	0
.......................................................................TTATGGCTTTTCATTCCTATGT...........................................................................................................	22	1	2	0.50	1	1	0
........................................................................TATGGCTCTTTATTCCTATGTG..........................................................................................................	22	1	2	0.50	1	1	0
.........................................................................ATGGCTTTTTATTCCTAT.............................................................................................................	18	0	2	0.50	1	1	0
...................................................................GGCCCTATGGCTTTTTATTCCTATGT...........................................................................................................	26	3	3	0.33	1	1	0
.......................................................................ATATGGCTTTTTATTCCTAT.............................................................................................................	20	1	3	0.33	1	1	0
........................................................................AATGGCTTTTTATTCCTAT.............................................................................................................	19	1	6	0.17	1	1	0

Anti-sense strand reads

AACTTTATCAACACTTCAGTACACTTCTTTTATTCAAAACGTAGGCTGGTTCTATTTAAGTGAGATCACGAAATACCGAAAAATAAGGATACACTATCATTATTTCAGAGTACATCCCTACCTTCGGTACTTTATGTAACACTTTTTAGTAGTTGACTCTTCCCCGGTAGTCATATCTCTTGCAATCGGACACCTCGACA ***************************************************(((((....(((.((((((((((((.((((((((((((.............)))))))))))))))))))))))).)))...)))))...*******************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 05/16/2015 at 12:46 AM