ID:

ocu-mir-129-2

Coordinate:

chr1:183233884-183233973 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-50.3
mature
star
  1. chr1:183233898-183233917 +
  2. chr7:16127108-16127127 -

Sense Strand Reads

GCTGAAGGCGGCGGCAGCGGCGGCGGAGGACCGAAGCAGCCGGCGGACTCTGCCCTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTCGCGGAGGGCGCGCGCATCGAGACGACGGCTTCAACAGCGATCGCCGAAGCCCGCACCTGC
*************************************************.(((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).)))))))))))))).*************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP
GSM1528820
Adult_testes
..........................................................................................................AAGCCCTTACCCCAAAAAGC................................................................ 20 0 1 11.00 11 9 2
..........................................................................................................AAGCCCTTACCCCAAAAAG................................................................. 19 0 2 1.50 3 3 0
..........................................................................................................AAGCCCTTACCCCAAAAAGCA............................................................... 21 0 1 1.00 1 1 0
................................................................CTTTTTGCGGTCTGGGCTTG.......................................................................................................... 20 0 2 0.50 1 0 1
.........................................................................................................AAAGCCCTTACCCCAAAAAGC................................................................ 21 1 2 0.50 1 1 0
.........................................................................................................AAAGCCCTTCCCCCAAAAAGC................................................................ 21 2 15 0.07 1 1 0

Anti-sense strand reads

CGACTTCCGCCGCCGTCGCCGCCGCCTCCTGGCTTCGTCGGCCGCCTGAGACGGGAAGCGCTTAGAAAAACGCCAGACCCGAACGACATGTATTGAGTTATCGGCCTTCGGGAATGGGGTTTTTCGTAAGCGCCTCCCGCGCGCGTAGCTCTGCTGCCGAAGTTGTCGCTAGCGGCTTCGGGCGTGGACG
*************************************************.(((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).)))))))))))))).*************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528820
Adult_testes
..................................................................................................................................................................TTGTCGCGAGCGGCT............. 15 1 20 0.05 1 1

Generated: 05/16/2015 at 12:28 AM