ID:

ocu-mir-10a

 Coordinate:

chr19:38782578-38782687 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.5 -32.4 -32.2

Sense Strand Reads

GAGAAGAACGCTCGGAAAGTGGGAGAACTGGAACATTTCTGGGCCGAGAAGATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATTTTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCATTTTTCCCCCCAGAAGATAAAAATACGCGCTGTCTTTCTAAATGAGGACA
*********************************************************.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528821
Adult_testes_Mili_IP		 GSM1528820
Adult_testes
........................................................................ACCCTGTAGATCCGAATTTGT..................................................................................................................... 21 0 1 22.00 22 6 16
.......................................................................TACCCTGTAGATCCGAATTT....................................................................................................................... 20 0 1 8.00 8 8 0
........................................................................ACCCTGTAGATCCGAATTTGTT.................................................................................................................... 22 1 1 5.00 5 5 0
.........................................................................CCCTGTAGATCCGAATTTGT..................................................................................................................... 20 0 1 4.00 4 0 4
........................................................................ACCCTGTAGATCCGAATTT....................................................................................................................... 19 0 1 3.00 3 3 0
..........................................................................CCTGTAGATCCGAATTTGT..................................................................................................................... 19 0 1 2.00 2 0 2
.......................................................................TACCCTGTAGATCCGAATTTGTG.................................................................................................................... 23 0 1 2.00 2 1 1
.......................................................................TACCCTGTAGATCCGAATT........................................................................................................................ 19 0 1 1.00 1 1 0
........................................................................ACCCTGTAGATCCGAATTTGTG.................................................................................................................... 22 0 1 1.00 1 1 0
.......................................................................TACCCTGTAGATCCGAATTTG...................................................................................................................... 21 0 1 1.00 1 1 0
........................................................................ACCCTGTAGATCCGAATTTAT..................................................................................................................... 21 1 1 1.00 1 1 0
.......................................................................TACCCTGTAGATCCGAATTTGT..................................................................................................................... 22 0 1 1.00 1 1 0
........................................................................ACCCTGTAGATCCGAATTTGTGA................................................................................................................... 23 1 1 1.00 1 1 0
...........................................................................CTGTAGATCCGAATTTGT..................................................................................................................... 18 0 1 1.00 1 0 1
................................................................................................................CAAATTCGTATCTAGGGGAAT............................................................................. 21 0 1 1.00 1 1 0
.......................................................................TACCCTGTAGAGCCGAATTTG...................................................................................................................... 21 1 2 0.50 1 1 0

Anti-sense strand reads

CTCTTCTTGCGAGCCTTTCACCCTCTTGACCTTGTAAAGACCCGGCTCTTCTAGACAGACAGAAGACATATATGGGACATCTAGGCTTAAACACATTCCTTAAAACACCAGTGTTTAAGCATAGATCCCCTTATACATCAACTGTATTTGTGAGGCGAGTAAAAAGGGGGGTCTTCTATTTTTATGCGCGACAGAAAGATTTACTCCTGT
**************************************************************.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...********************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 05/16/2015 at 12:40 AM