ID:

nve-mir-9458

Coordinate:

scaffold_504:85067-85149 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-16.2 -16.2 -16.0

Sense Strand Reads

GAAAAGCCTGCAGAGGACTCTAAAGATCAAGCTGTTGAAGAAAGTGAGACAAAGGACGCGAGCAAAGATGGAGAGGGCAATGCTGCGGACAAGCGGGCACGAGGCCGTCCTAAAAAAGCTGACGGCGAACCTGCCACCAAAAAGCCCAAGAAAGTGAAGGAGAGTCATGTCCCTAGCCGTGCT
****************************************.....................((.....(((.((.(((..((((((......)).))))....))).))))).....))****************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR039755
"Adult males, oxidized"
SRR039754
"Adult males, untreated"
SRR039758
"Early planula, untreated"
SRR039765
"Primary polyps, oxidized"
SRR039764
"Primary polyps, untreated"
SRR039759
"Early planula, oxidized"
SRR039756
"Gastrula, untreated"
SRR039760
"Late planula, untreated"
SRR039763
"Metamorphosing individuals, oxidized"
SRR039762
"Metamorphosing individuals, untreated"
SRR039761
"Late planula, oxidized"
SRR039757
"Gastrula, oxidized"
SRR039726
"Blastula, untreated"
SRR039729
"Blastula, oxidized"
SRR039732
"Adult females, oxidized"
SRR039731
"Adult females, untreated"
SRR039727
"Unfertilized eggs, untreated"
SRR039728
"Unfertilized eggs, oxidized"
.......................................................ACGCGAGCAAAGATGGAGAGGG.......................................................................................................... 22 0 1 167.00 167 59 47 6 12 4 10 5 6 2 2 5 6 0 0 1 0 1 1
.......................................................ACGCGAGCAAAGATGGAGAGGGC......................................................................................................... 23 0 1 110.00 110 22 13 13 14 11 5 2 8 5 8 6 1 0 1 0 0 1 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGC.................................................................................................... 28 0 1 92.00 92 10 11 15 4 15 5 8 5 2 6 6 1 1 0 2 0 0 1
.......................................................ACGCGAGCAAAGATGGAGAGG........................................................................................................... 21 0 1 90.00 90 36 17 2 7 7 5 0 2 4 2 4 2 0 1 0 1 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCA........................................................................................................ 24 0 1 85.00 85 29 23 3 6 3 3 2 3 5 7 0 0 0 0 0 1 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATG..................................................................................................... 27 0 1 44.00 44 8 7 8 1 3 6 3 2 1 1 2 1 0 1 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAA....................................................................................................... 25 0 1 13.00 13 2 4 1 1 0 2 1 2 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAAT...................................................................................................... 26 0 1 12.00 12 0 3 0 0 0 2 3 0 0 1 0 2 1 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGA.................................................................................................... 28 1 1 12.00 12 1 3 2 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCT........................................................................................................ 24 1 1 4.00 4 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGT.................................................................................................... 28 1 1 4.00 4 0 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATT..................................................................................................... 27 1 1 4.00 4 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGCTGCGGACAAGCGGGCACGAGG............................................................................... 24 0 1 4.00 4 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGAT................................................................................................... 29 1 1 3.00 3 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGTG.......................................................................................................... 22 1 1 3.00 3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................TCTAAAGATCAAGCTGTTGAAGAAAGTG......................................................................................................................................... 28 0 1 3.00 3 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGCTA.................................................................................................. 30 1 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAG............................................................................................................ 20 0 3 2.33 7 3 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................ACGCGAGCGAAGATGGAGAGGGCA........................................................................................................ 24 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGCT................................................................................................... 29 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGCGGG.......................................................................................................... 22 1 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCATA...................................................................................................... 26 2 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGACAGG........................................................................................................... 21 1 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ATGCGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TAAAAAAGCTGACGGCGAACCTG.................................................. 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGA............................................................................................................. 19 0 3 2.00 6 1 2 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCATT...................................................................................................... 26 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGTGAGCAAAGATGGAGAGGGCAATGC.................................................................................................... 28 1 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................ACGCGACCAAAGATGGAGAGGAC......................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGCTGGAGAGGGC......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATCGACAGG........................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCACAGTTGGAGTGGGCAATGC.................................................................................................... 28 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGTGAGCAAAGATGGAGAGGGCT........................................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGATCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCACCGATGAAGAGGG.......................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACTCGAGCAAAGATGGATAGGGCAAT...................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGAAAAGATGGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................AAGTGAGCAAAGATGGAGAGGGC......................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAAAGGGAA........................................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGGGAGGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAGCGAGCCAAGATGGAGAGGGCAATGC.................................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CGCGAGCAAAGATGGAGAGGGCAATG..................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCCAAGATGGAGAGGGC......................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGA......................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGGGAGCAAAGAAGGAGAGGGC......................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGCTGA................................................................................................. 31 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................TCGCGAGCAAAGATGGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................ACGGGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACTAGAGCAAAGATGGAGAGGGA......................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGTAGAGGGCAATGC.................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................ACGCGAGCAAAAATGGAGAGG........................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACCGAGCAAAGATGGAGAGGG.......................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGCAGAAGGCA........................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGCC......................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATGCGAGCAAAGATGGAGAGGGCAATGC.................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................AAGTGAGACAACGGACGCGAGCAAAGA................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATGCGAGCGAAGAAGGAGAGGGCA........................................................................................................ 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAGCGAGCAAAGATGGAGAGGGA......................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATTGAGAGGGCT........................................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGAA................................................................................................... 29 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACTCGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGACAGGGC......................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGCGAGGGCAATGC.................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGTGGGAGAGGGCAGTGC.................................................................................................... 28 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATGCGAGCAAAGAAGGAGAGGGCA........................................................................................................ 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACCCGAGCAAAGATGGAGAGGGCA........................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATTA.................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGGCGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TAAAAAAGCTGACGGCGAACCTGCCACCA............................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACCCGGGCAAAGATGGAGGGGGC......................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGGGCAAAGATGGAGAGGGCAATGC.................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGCGAGGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCACAGATGGAGAGGGC......................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGAAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGCGG........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAATATGGAGAGTGCAT....................................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAAGGA.................................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGGTGGAGGGG........................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGCGCA........................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAGCGAGCAAAGATGGAGACG........................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGTTGGAGAGGGC......................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGCG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCTAGCAACGATGGAGCGGG.......................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGACGGAGAGG........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGTTCAATGCA................................................................................................... 29 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATCGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGAAAGGCT................................................................................................... 29 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGATGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGCTGGAGATGG.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGTGCAAAGATGGAGAGGGCA........................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAACAAAGATGGAGAGGGCAATCA.................................................................................................... 28 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGTAATGC.................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCC........................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................AAGTGAGACAAAGGACGCGAGCAAAGAT.................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCCATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGTAGAGG........................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGGA........................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GAAAGTGAGACAAAGGACGCGA.......................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAGCGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGCGCAAAGATGGAGAGGGC......................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCACAGATGGAGACGGC......................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGCAAA................................................................................................. 31 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................GCGAGCAAAGATGGAGAGGGC......................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAACATCGAGAGGGCA........................................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCACAGATGGAGAGGGCAATGT.................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCGAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCACAGATTGAGAGGG.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGAAAAGACGGAGAGGGCAC....................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TCTAAAGATCAAGCTGTTGAAGAAA............................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGATCAAAGATGGAGATGGCAATG..................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................GCGCGAGCAAAGATGGAGAGGGCATT...................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................ACCTGCCACCAAAAAGCCCAAGAAAGTGA.......................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCCAAGATGGAGAGGGCAA....................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGCGC......................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGAAGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AGCCCAAGAAAGTGAAGGAGAGTCATGT............. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGCGCAAAGATGGAGAGGGCCATGC.................................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAGAGATGGAGAGGGCA........................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TGTTGAAGAAAGCGAGACATAGGACGCGAGG........................................................................................................................ 31 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAGGATGGAGAGGGCAATGC.................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGTGCAAAGATGGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATAGAGAGGGCA........................................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGCCAATGC.................................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATTGAGAGGGCAATGC.................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGTT................................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACACGAGCAAAGATGGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................ACGTGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGATT.................................................................................................. 30 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGGGGG.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGTGGGCAATGCT................................................................................................... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................CACGCGAGCAAAGATGGAGAGGG.......................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGAGAGCAAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCTAAGATGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGGGCAAAGTTGGAGAGGGCAATGC.................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGATAGGG.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGTGAGGG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGCTGCGGACAAGCGGACACGAGGCCGA........................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AGGACTCTAAAGATCAAGCTGTTGAAGAA............................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCGAAGGTGGAGAGGG.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGAGGGAGAGGG.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGGGCAAAGATGGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAGAGATGGAGAGGGCAATGA.................................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCGCCAGCAAAGATGGAGAGGGC......................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGAGAGAAAAGATGGAGAGGGCA........................................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACCGAGCAAAGATGGAGAGG........................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATGCTGC................................................................................................. 31 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TAAAAAAGCTGACGGCGAACCTGCCACC............................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGATCAAAGATGGAGAGGGCA........................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGAGACCAAAGATGGAGAGG........................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAAAAAGCTGACGGCGAACCTGCCAC.............................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGCAATTTT................................................................................................... 29 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................TAAAAAAGCTGACGGCGAACCTGCCAC.............................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................ATGCGAGCAAAGATGGAGAGGGCAATG..................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGT.......................................................................................................... 22 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACTCGAGCAAAGATGGAGATTG.......................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGC........................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGTAAAGATGGA............................................................................................................... 17 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGAAGAG............................................................................................................ 20 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGGTCCAGAGGG.......................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGAG.......................................................................................................... 22 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAGCGAGCAAAGAAGGAGAGG........................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................ACGAGAGCAAAGATGGAGAG............................................................................................................ 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGGGTT........................................................................................................ 24 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCGAGCAAAGATGGAGAGT........................................................................................................... 21 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGCAAGCAAAGATGGAGA............................................................................................................. 19 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACTCGAGCAAAGATGGAGATGT.......................................................................................................... 22 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TGATACAAGGGACTCGAGCAA...................................................................................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................AATCCTGCGGAGACGCGGG...................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................AGAGCTGACGGCGTACCTT.................................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................CGCGAGCAAAGATGGGAGGG........................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GCAAGATGGAGAGGGCA........................................................................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TGGAGAGGGCAATGATA.................................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTTTCGGACGTCTCCTGAGATTTCTAGTTCGACAACTTCTTTCACTCTGTTTCCTGCGCTCGTTTCTACCTCTCCCGTTACGACGCCTGTTCGCCCGTGCTCCGGCAGGATTTTTTCGACTGCCGCTTGGACGGTGGTTTTTCGGGTTCTTTCACTTCCTCTCAGTACAGGGATCGGCACGA
****************************************************************.....................((.....(((.((.(((..((((((......)).))))....))).))))).....))****************************************
Read size # Mismatch Hit Count Total Norm Total SRR039765
"Primary polyps, oxidized"
SRR039758
"Early planula, untreated"
SRR039763
"Metamorphosing individuals, oxidized"
SRR039728
"Unfertilized eggs, oxidized"
SRR039764
"Primary polyps, untreated"
................................................................................................CGTGCTCCGGGATGGTTTTTT.................................................................. 21 3 7 0.14 1 1 0 0 0 0
.................................................GGTTCCGGCGCTCGTCTCTA.................................................................................................................. 20 3 9 0.11 1 0 1 0 0 0
......GTACGTCTCCTGAGATTT............................................................................................................................................................... 18 1 12 0.08 1 0 0 1 0 0
............................................................TCTTTTCTACTTCTCCCGTTAA..................................................................................................... 22 3 20 0.05 1 0 0 0 0 1
................................................................................................................................TAGGTGGTGGTTTTTCGGGT................................... 20 3 20 0.05 1 0 0 0 1 0

Generated: 08/21/2014 at 10:25 AM