ID:nve-mir-9447-1 |
Coordinate:scaffold_84:426258-426325 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -8.0 | -7.7 | -7.6 |
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 |
 |
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GTCTTGAATGCACAGTCCAAGGCCTAAACTCTCGCGTCCCAGCTATCAAgtGGGgtGtgTGtttttGGTGttTgGTGtgttGgTttTTGGTGtgGtTTgtggTTgTTgtGTgTGgggTGttGttGTgTttTTtttGtgGttttTTtGGgtATTTTGGGTTTTTTCTAT
***********************************...((((((((((((....................))))))).)))))...............................................************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039731 "Adult females, untreated" |
SRR039764 "Primary polyps, untreated" |
SRR039762 "Metamorphosing individuals, untreated" |
SRR039755 "Adult males, oxidized" |
SRR039757 "Gastrula, oxidized" |
SRR039759 "Early planula, oxidized" |
SRR039763 "Metamorphosing individuals, oxidized" |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................ACGATTCACCTTCTTCAGTCTGC..................................................... | 23 | 0 | 20 | 0.30 | 6 | 0 | 6 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................TGAAAAAGGTGAATCGTGACAATT..................................................................................... | 24 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................AAGACGAAAATTTGGCAATT............... | 20 | 1 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................AGGGCAGACTGAAAAAGG.................................................................................................... | 18 | 0 | 18 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................TGAACAGGGCAGACGGA.......................................................................................................... | 17 | 2 | 19 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................................................ACGATTCAGCTTCTTCAGTCTGC..................................................... | 23 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................................................TTCTTCAGTCTGCCCTGAGGG............................................. | 21 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................ACGATTCACCTTCTTCAGTCTGCC.................................................... | 24 | 0 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
|
CAGAACTTACGTGTCAGGTTCCGGATTTGAGAGCGCAGGGTCGATAGTTgtCCCgtCtgACtttttCCACttAgCACtgttCgAttAACCACtgCtAAgtggAAgAAgtCAgACgggACttCttCAgAttAAtttCtgCttttAAtCCgtTAAAACCCAAAAAAGATA
**************************************...((((((((((((....................))))))).)))))...............................................*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039756 "Gastrula, untreated" |
SRR039760 "Late planula, untreated" |
|---|---|---|---|---|---|---|---|
| .....................................................CGTCTGACTTTTTCCACTTAGCA............................................................................................ | 23 | 0 | 16 | 0.06 | 1 | 1 | 0 |
| .............................................................................................GCTAACTGGAAGACGTCAGACGGGACTTC.............................................. | 29 | 2 | 20 | 0.05 | 1 | 0 | 1 |
| ............................................................................................TGCTAAGTGGAAGAAGTCAGACGGGACT................................................ | 28 | 0 | 20 | 0.05 | 1 | 1 | 0 |
| ...............................................................................................TAAGTGGAAGAAGTCAGACGG.................................................... | 21 | 0 | 20 | 0.05 | 1 | 0 | 1 |
Generated: 08/21/2014 at 10:57 AM