ID:nve-mir-9425 |
Coordinate:scaffold_216:166335-166402 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -27.2 | -27.2 | -27.0 |
 |
 |
 |
|
CATTGAATGGTCAAATGTTGGAATGGAATGAAATAAGTAAATGGCGAGTCACATGGAGAAGAACACCCAAAATAGCTGAACATCGCATTCAGTTTACTTGAGTGTTCTCCTCTGGGGCTTTGCATGGACATTTACATGGTGACTACGCATGCGCATGCTCTGTGTGCA
*******************************************(((((((....((((.(((((((.(((...(((((((.......)))))))...))).))))))).))))..))).))))********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039754 "Adult males, untreated" |
SRR039755 "Adult males, oxidized" |
SRR039765 "Primary polyps, oxidized" |
SRR039731 "Adult females, untreated" |
SRR039764 "Primary polyps, untreated" |
SRR039732 "Adult females, oxidized" |
SRR039763 "Metamorphosing individuals, oxidized" |
SRR039762 "Metamorphosing individuals, untreated" |
SRR039758 "Early planula, untreated" |
SRR039761 "Late planula, oxidized" |
SRR039760 "Late planula, untreated" |
SRR039759 "Early planula, oxidized" |
SRR039726 "Blastula, untreated" |
SRR039728 "Unfertilized eggs, oxidized" |
SRR039729 "Blastula, oxidized" |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................AAGAACACCCAAAATAGCTGA......................................................................................... | 21 | 0 | 1 | 329.00 | 329 | 64 | 59 | 53 | 46 | 39 | 52 | 4 | 5 | 3 | 2 | 0 | 1 | 1 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAA........................................................................................ | 22 | 0 | 1 | 250.00 | 250 | 44 | 28 | 33 | 25 | 38 | 20 | 19 | 18 | 14 | 5 | 3 | 2 | 0 | 1 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAAT....................................................................................... | 23 | 1 | 1 | 48.00 | 48 | 10 | 11 | 2 | 10 | 6 | 2 | 1 | 0 | 3 | 1 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAATT...................................................................................... | 24 | 2 | 1 | 15.00 | 15 | 4 | 1 | 1 | 3 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................AGAACACCCAAAATAGCTGA......................................................................................... | 20 | 0 | 1 | 8.00 | 8 | 3 | 0 | 2 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................AGAACACCCAAAATAGCTGAA........................................................................................ | 21 | 0 | 1 | 5.00 | 5 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAT........................................................................................ | 22 | 1 | 1 | 4.00 | 4 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGTTGAA........................................................................................ | 22 | 1 | 1 | 4.00 | 4 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAATTT..................................................................................... | 25 | 2 | 1 | 3.00 | 3 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATCGCTGAA........................................................................................ | 22 | 1 | 1 | 3.00 | 3 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTG.......................................................................................... | 20 | 0 | 1 | 3.00 | 3 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGTTGA......................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCTAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCTAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACACAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGATGA......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATATCTGA......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACTCAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................GAGAACACCCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTCA......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGC......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAG............................................................................................. | 17 | 0 | 2 | 2.00 | 4 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAGTAGCTGAA........................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCACAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAAAACCCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCT........................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACTCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAATACCCAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGACT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAAAACCCAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGGACACCCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGACCACCCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACAACCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................ACACCCAAAATAGCTGA......................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................CAGAACACCCAAAATAGCTTAA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATTGCTGTA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................CAGTTTACTTGAGTGTTCT............................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGTA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCCAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAGCACCCAAAAGAGCTGAA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACATCCGAAATAGCTGAA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAATTAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCAAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAATACCCAAAATAGCTGAAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAACAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAACATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAAAAGCTGAAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAACG...................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGATA....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACTCCCAAAATAGCTGCA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGTACACCCAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCCGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGATCACCCAAAATTGCTGAA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AACAACACCCAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAACTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACCCCCAAAATAGCTGAC........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTTA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAGATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................AGAACACCCAAAATAGCTGC......................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................CAGTTTACTTGAGTGTTCTCCT......................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACTCAAAATAGCTGAATT...................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGTACACCAAAAATAGCTGA......................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACGCCCAAAATAGCTGT......................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..........................................................AAGAACAACCAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATATCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAATTA..................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AGGAACACCCAAAATAGCTGAATT...................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAAGAGCTGAAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATATCTAAA........................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAACAGCTGAAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................ATTAACACCCAAAATAGCTGA......................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACATCCAACATAGCTGAAT....................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACATTCAAAATAGCTGA......................................................................................... | 21 | 2 | 2 | 1.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACATCCAAAATAGCTGAAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACACAAAATAGCTGAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCTAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCACAATAGCTGAAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAATACCCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCACAATAGATGA......................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AATAACACCCAAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGGAT....................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCCAAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATACCCGA......................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAGATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGAATA...................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTGT......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTCAA........................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCACAATAGCTGA......................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAAAATAGCTAAAT....................................................................................... | 23 | 2 | 3 | 0.67 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AATAACACCCAAAATAGCTCA......................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACCCAACATATCTGA......................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................GATCAAGAACACCCAAAATAGCTGA......................................................................................... | 25 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACAACCAAAATAACTGAA........................................................................................ | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACTTAAAATAGCTGAAT....................................................................................... | 23 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACTTAAAATAGCTGAA........................................................................................ | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAACACACAAAATAGCCGA......................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAAAACACAAAATAGCTGA......................................................................................... | 21 | 2 | 5 | 0.40 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAATATCCAAAAGAGCTGAA........................................................................................ | 22 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGAAAACCCAAAATAGCTGGA........................................................................................ | 22 | 2 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AACAACACCCAAAATAGAGGAA........................................................................................ | 22 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................AAGACACCCAAAATAGCTGAT........................................................................................ | 21 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AAGTATACCCAAAATAGATGAA........................................................................................ | 22 | 3 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................AATAACACCCAAAATATCTTAA........................................................................................ | 22 | 3 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
|
GTAACTTACCAGTTTACAACCTTACCTTACTTTATTCATTTACCGCTCAGTGTACCTCTTCTTGTGGGTTTTATCGACTTGTAGCGTAAGTCAAATGAACTCACAAGAGGAGACCCCGAAACGTACCTGTAAATGTACCACTGATGCGTACGCGTACGAGACACACGT
*********************************************(((((((....((((.(((((((.(((...(((((((.......)))))))...))).))))))).))))..))).))))******************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039731 "Adult females, untreated" |
|---|---|---|---|---|---|---|
| ......................TACGTTGCTTTATTCATTT............................................................................................................................... | 19 | 2 | 6 | 0.17 | 1 | 1 |
Generated: 08/21/2014 at 09:34 AM