ID:nve-mir-2046 |
Coordinate:scaffold_261:230225-230315 + |
Confidence:Known |
Type:Unknown |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -49.7 |
 |
|
ctagtgcttttcaaaaaaagtcacccctcagggtctcacaccaccTTTTAAGAGTAAATTTTATGGCATTACATCACTTCATAGCTATTTACTCTTAAGAGTAAATAGCTATGAAGTGATACAATGCCATAAAATTTTGACATCAAATAGGCAGTGTGGATGTAGATTGAGGTCTTTGCATTAGCTGAGTT
********************************************************((((((((((((((..((((((((((((((((((((((....))))))))))))))))))))))..))))))))))))))..***************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039764 "Primary polyps, untreated" |
SRR039758 "Early planula, untreated" |
SRR039762 "Metamorphosing individuals, untreated" |
SRR039754 "Adult males, untreated" |
SRR039760 "Late planula, untreated" |
SRR039756 "Gastrula, untreated" |
SRR039731 "Adult females, untreated" |
SRR039759 "Early planula, oxidized" |
SRR039765 "Primary polyps, oxidized" |
SRR039761 "Late planula, oxidized" |
SRR039755 "Adult males, oxidized" |
SRR039726 "Blastula, untreated" |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................CATCACTTCATAGCTATTTACTCT................................................................................................ | 24 | 0 | 1 | 23.00 | 23 | 4 | 3 | 3 | 3 | 4 | 1 | 2 | 1 | 1 | 0 | 0 | 1 |
| .......................................................................CATCACTTCATAGCTATTTACTC................................................................................................. | 23 | 0 | 1 | 19.00 | 19 | 4 | 1 | 3 | 1 | 2 | 5 | 1 | 0 | 1 | 0 | 1 | 0 |
| .......................................................................CATCACTTCATAGCTATTTACT.................................................................................................. | 22 | 0 | 1 | 17.00 | 17 | 10 | 2 | 2 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATAGCTATGAAGTGATACA.................................................................... | 22 | 0 | 1 | 9.00 | 9 | 0 | 4 | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................ACATCACTTCATAGCTATTTAC................................................................................................... | 22 | 0 | 1 | 6.00 | 6 | 2 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTA.................................................................................................... | 20 | 0 | 1 | 3.00 | 3 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTACTCA................................................................................................ | 24 | 1 | 1 | 3.00 | 3 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTAC................................................................................................... | 21 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATAGCTATGAAGTGATA...................................................................... | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATAGCTATGAAGTGATACAA................................................................... | 23 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................ACATCACTTCATAGCTATTTACT.................................................................................................. | 23 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| .......................................................................CATCCCGTCGTAGCTATTTACTCT................................................................................................ | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCGCTTCCTAGCTATTTAC................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGATATTTACTCT................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTACTCTT............................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATACCACTTTACTCT................................................................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACGTCATAGCTATTTACT.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCAGTGCATAGCTATTTACTC................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................ACATCACTCCATAGCTATTTAC................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATATCTATTTACTCA................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATATCTATTTA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................ACATCACTTCATAGTTATTTACT.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTAGTTACTC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTATTCT................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACCTCATAGCTATTTGCTCA................................................................................................ | 24 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTAGT.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTT..................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................TCACTTCATAGCTATTTACTC................................................................................................. | 21 | 0 | 2 | 1.00 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATATCTATGAATTGATACAA................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATAACTTCATAGCTATTTACTA................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTACTCC................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATACCTATGACGTGATACA.................................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGCTATTTACTAA................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATAGCTATGAAGACATAC..................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................ACATCACTTCATAGCTATTTACC.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATCGCTATTTGCT.................................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCCCTTCATAGCTATTTACT.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATATCTATTTACTC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATCGCTATTTACTC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................ACATCACTTCATAGCTATTTACA.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACTTCATAGTTATTTACT.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CATCACCTCATAGCTATTTACTCA................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................TCACTTCAGAGCTATTTACT.................................................................................................. | 20 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................ATCACTTCATAGCTATTTACTC................................................................................................. | 22 | 0 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ........................................................................ATCACTTCATAGCTATTTACTCT................................................................................................ | 23 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................GCATCACTTCATAGCTATTTAC................................................................................................... | 22 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................TCACTTCATAGCTATTTACT.................................................................................................. | 20 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TAAATAGCTATGAAGTGAT....................................................................... | 19 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................AAATCACTTCATATCTTTTTAC................................................................................................... | 22 | 3 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................ATAGGCAGTGTGGAGGG............................ | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
|
GtTgtgGttttGTTTTTTTgtGTGGGGtGTgggtGtGTGTGGTGGAAAATTCTCATTTAAAATACCGTAATGTAGTGAAGTATCGATAAATGAGAATTCTCATTTATCGATACTTCACTATGTTACGGTATTTTAAAACTGTAGTTTATCCGTCACACCTACATCTAACTCCAGAAACGTAATCGACTCAA
*****************************************************((((((((((((((..((((((((((((((((((((((....))))))))))))))))))))))..))))))))))))))..******************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039754 "Adult males, untreated" |
SRR039764 "Primary polyps, untreated" |
SRR039731 "Adult females, untreated" |
SRR039762 "Metamorphosing individuals, untreated" |
SRR039756 "Gastrula, untreated" |
SRR039758 "Early planula, untreated" |
SRR039760 "Late planula, untreated" |
SRR039761 "Late planula, oxidized" |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................GTAGTGAAGTATCGATAAAT.................................................................................................... | 20 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................CTCATTTATCGATACTTCACT........................................................................ | 21 | 0 | 2 | 1.00 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................TCATTTATCGATAGTTCACTTT...................................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................TAGTGAAGTATCGATAAAT.................................................................................................... | 19 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................CTCATTTATCGATACTTCACTA....................................................................... | 22 | 0 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................................TCATTTATCGAGACTTCACT........................................................................ | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................CATTTATCGATACTTCACTACG..................................................................... | 22 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................TCTCATTTATCGATACTTCACTA....................................................................... | 23 | 0 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................TCATTTATCGATACTTCACT........................................................................ | 20 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Generated: 08/21/2014 at 09:47 AM