ID:nve-mir-2045 |
Coordinate:scaffold_43:185999-186099 + |
Confidence:Known |
Type:Unknown |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -20.6 | -20.5 | -20.4 |
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ATAGCAAAGTGCTCCATACAGTAACTTTATTTAATGATACAAAATTTATGTCTTATTAATGACAATAGTTTTCCCAGAGTGTTGAGTTCATACAAGATTTCTTGTGCTTGTATGGTAATTAATCTCTGGTACATAGATTCCATAAAATACATTGACTGAAATTGTCCAGCCTATATTGGTTGTGGCCTTCTCTCTTTGCTA
********************************************************.................((((((.(((((..(((((((((((.....)).)))))))))...))))))))))).................******************************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039764 "Primary polyps, untreated" |
SRR039758 "Early planula, untreated" |
SRR039765 "Primary polyps, oxidized" |
SRR039762 "Metamorphosing individuals, untreated" |
SRR039761 "Late planula, oxidized" |
SRR039759 "Early planula, oxidized" |
SRR039756 "Gastrula, untreated" |
SRR039760 "Late planula, untreated" |
SRR039763 "Metamorphosing individuals, oxidized" |
SRR039754 "Adult males, untreated" |
SRR039731 "Adult females, untreated" |
SRR039757 "Gastrula, oxidized" |
SRR039727 "Unfertilized eggs, untreated" |
SRR039755 "Adult males, oxidized" |
SRR039728 "Unfertilized eggs, oxidized" |
SRR039729 "Blastula, oxidized" |
SRR039732 "Adult females, oxidized" |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................TCCCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 0 | 1 | 332.00 | 332 | 61 | 59 | 52 | 30 | 32 | 22 | 14 | 16 | 21 | 9 | 4 | 7 | 0 | 3 | 1 | 0 | 1 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACA........................................................................................................... | 23 | 0 | 1 | 21.00 | 21 | 4 | 3 | 7 | 0 | 3 | 1 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCAT.............................................................................................................. | 20 | 0 | 1 | 10.00 | 10 | 3 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCA............................................................................................................... | 19 | 0 | 1 | 10.00 | 10 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATA............................................................................................................. | 21 | 0 | 1 | 9.00 | 9 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 4 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTA...................................................................... | 22 | 0 | 1 | 7.00 | 7 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCCCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 25 | 0 | 1 | 7.00 | 7 | 3 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAAT......................................................................................................... | 25 | 1 | 1 | 7.00 | 7 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATAC............................................................................................................ | 22 | 0 | 1 | 6.00 | 6 | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAAA......................................................................................................... | 25 | 1 | 1 | 5.00 | 5 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTACT.................................................................... | 24 | 1 | 1 | 4.00 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTTAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCTTAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGGTACT.................................................................... | 23 | 1 | 1 | 3.00 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAAG......................................................................................................... | 25 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGGGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGCGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGATTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCAAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGGGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGGTCATACAA.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................TAATTAATCTCTGGTACA.................................................................... | 18 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CCCCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTT...................................................................... | 22 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGATTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGT........................................................................ | 20 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCTTAGAGTGTTGAGTTCATACAAT......................................................................................................... | 25 | 3 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAATT........................................................................................................ | 26 | 2 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTACA.................................................................... | 24 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................CCCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 23 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCACAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACATA......................................................................................................... | 25 | 2 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGGTACA.................................................................... | 23 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................TCTCAGAGTGTTGAGTTCATACAAT......................................................................................................... | 25 | 2 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAAAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAC.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTTATACAA.......................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TTCCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 2 | 1.50 | 3 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................CCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 22 | 0 | 2 | 1.50 | 3 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTACTCTCTGGTACC.................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAATTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGCGTGTTGCGTTCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCCCAGTGTGTTGAGTTCATACATG......................................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGGTACATTT................................................................. | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGATTGTTTATTTCATACAA.......................................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGCTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGGGCTGAGTTAATACAA.......................................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTCATTAATCTCTGGTA...................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCCGAGTGTTGAGTTCATACAAA......................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTTT..................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGCGTTGAGTGCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGACTTCATAC............................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGGAATTAATCTCTGGTACA.................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTATT.................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAATTAT...................................................................................................... | 28 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTG......................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCCCAGAGTGTTGAGTTCATACA........................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTAT..................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCTAGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCTTAGAGTGTTGAGTTCATACAA.......................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................TGCTTGTATGGTAATTAATCTCTGGTACAT................................................................... | 30 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGGTA...................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATAAAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTT................................................................................................................ | 18 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGGTAC..................................................................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCGGAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCGAGAGCGTTGAGTTCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATCCAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGGAATTAATCTCTGG........................................................................ | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTAATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGATCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................CCCAGAGTGTTGAGTTCATACAG.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................TCCCATAGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGAGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATATAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATATA........................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCACAGAGTGTTGAGTTCATACA........................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGAGTTGAGTTCATACAATT........................................................................................................ | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGCGTGTTGAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCCCGGAGTGTTGAGTTCATACAA.......................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGAT....................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACGA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCATAGTCTTGAGTTCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAATTA....................................................................................................... | 27 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGGTAT..................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................CCCAGAGTGTTGAGTTCATACA........................................................................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCCGAGTGTTGAGTTCATACAC.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTAAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAATTT....................................................................................................... | 27 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGAGTTGAGGTCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTCTGGAACTTAATCTCTGGTA...................................................................... | 22 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTTACTTCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTCAGTTCATACAA.......................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCCCAGAGTGTTGAGTTCATACAAT......................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTACGGTAATTAATTTCTGGTACT.................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TATGGTAATTAATCTCTGGTATT.................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................CTCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCAAGAGCGTTGAGTTAATACAA.......................................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTAATACAT.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TTCCCAGAGTGTTTATTTCATACAA.......................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGTGTTGAGTTCATACAAGATTTC.................................................................................................... | 30 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGAGAGGTGAGTTCATACAA.......................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TTTCAGAGTGTTTAGTTCATACAA.......................................................................................................... | 24 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................CCAGAGTGTTGAGTTCAT.............................................................................................................. | 18 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................CCAGAGTGTTGAGTTCATAAAA.......................................................................................................... | 22 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................CCAGAGTGTTTAGTTCCTACAA.......................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TTCCAGAGTGTTGAGTTCATTCAA.......................................................................................................... | 24 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................TCAGAGTGTTGAGTTCATACAA.......................................................................................................... | 22 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................TGTTGAGTTCATACA........................................................................................................... | 15 | 0 | 5 | 0.40 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TTTCAGAGTGTTGAGTTCATA............................................................................................................. | 21 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAAAGCGTTGAGTTCCTA............................................................................................................. | 21 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................GTATGGTAATTAATCTCTGTAT...................................................................... | 22 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................TAATTAATCTCTGTTACA.................................................................... | 18 | 1 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................TAATTAATCTCTGGTACTA................................................................... | 19 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCCAGGGTGTTGAGTT................................................................................................................. | 17 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................TCCTAGAGGGGTGAGTTCAT.............................................................................................................. | 20 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................AGTGTTGATTTCATACAATT........................................................................................................ | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................CTTCAGAGTGTTGAGTTCAT.............................................................................................................. | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
|
TATCGTTTCACGAGGTATGTCATTGAAATAAATTACTATGTTTTAAATACAGAATAATTACTGTTATCAAAAGGGTCTCACAACTCAAGTATGTTCTAAAGAACACGAACATACCATTAATTAGAGACCATGTATCTAAGGTATTTTATGTAACTGACTTTAACAGGTCGGATATAACCAACACCGGAAGAGAGAAACGAT
*******************************************************.................((((((.(((((..(((((((((((.....)).)))))))))...))))))))))).................******************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR039756 "Gastrula, untreated" |
|---|---|---|---|---|---|---|
| ...CGTTTCACGAGATATG...................................................................................................................................................................................... | 16 | 1 | 5 | 0.20 | 1 | 1 |
Generated: 08/21/2014 at 10:14 AM