ID:

nve-mir-2043b

 Coordinate:

scaffold_14:1321783-1321871 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-27.8
mature
  1. scaffold_14:1321803-1321824 +
  2. scaffold_14:1324956-1324977 +
  3. scaffold_14:1335139-1335160 +
star

Sense Strand Reads

AGACAAGAGGAATCTATCAAGAGTCAAATAGAATGACACTTCAAGAGACAGTATCTGATATCGAATCTCTTATATCGCCTTTTGAGGTTATTTTCTTAATGCCCTCAAAAGACGGTATTAGAGATTACACAGCTGGACAATCGTTGTTTGAGGATGCAGTGAGGATCAAAGTCTCATACGAAGATGCAC
*******************************************************........(((((((.((((((.(((((((((.((((.....)))).))))))))).)))))).))))))).........****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR039758
"Early planula, untreated"		 SRR039764
"Primary polyps, untreated"		 SRR039754
"Adult males, untreated"		 SRR039762
"Metamorphosing individuals, untreated"		 SRR039760
"Late planula, untreated"		 SRR039761
"Late planula, oxidized"		 SRR039756
"Gastrula, untreated"		 SRR039765
"Primary polyps, oxidized"		 SRR039759
"Early planula, oxidized"		 SRR039731
"Adult females, untreated"		 SRR039763
"Metamorphosing individuals, oxidized"		 SRR039755
"Adult males, oxidized"		 SRR039727
"Unfertilized eggs, untreated"		 SRR039757
"Gastrula, oxidized"		 SRR039726
"Blastula, untreated"		 SRR039732
"Adult females, oxidized"		 SRR039728
"Unfertilized eggs, oxidized"
......................................................................TATATCGCCTTTTGAGGTTATT................................................................................................. 22 0 3 137.67 413 71 49 70 43 31 31 17 21 26 8 18 19 0 5 2 2 0
......................................................................TATATCGCCTTTTGAGGTTAT.................................................................................................. 21 0 3 46.67 140 27 24 15 16 10 3 6 3 3 18 3 0 5 0 3 3 1
......................................................................TATATCGCCTTTTGAGGTTATTT................................................................................................ 23 0 3 25.00 75 13 12 8 7 4 7 3 6 4 0 3 5 1 2 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTA..................................................................... 21 0 1 15.00 15 4 8 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTAG.................................................................... 22 0 1 14.00 14 1 1 2 3 2 2 1 1 0 0 0 0 1 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTA................................................................................................... 20 0 3 8.67 26 3 3 2 1 2 0 8 1 0 6 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGTTATT................................................................................................. 21 0 3 7.33 22 5 3 0 3 3 1 1 0 2 0 1 2 0 1 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATT...................................................................... 20 0 1 5.00 5 0 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGTTAT.................................................................................................. 20 0 3 4.33 13 2 3 0 0 2 2 0 0 2 1 0 1 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTA................................................................................................ 23 1 3 2.67 8 0 1 2 1 0 0 0 1 0 1 2 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTAGA................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGTTATTT................................................................................................ 22 0 3 1.67 5 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0
......................................................................TATATCGCCTTTTTAGTTTATT................................................................................................. 22 2 3 1.67 5 0 1 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGTTA................................................................................................... 19 0 3 1.67 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGTTTATT................................................................................................. 22 1 3 1.67 5 0 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGCTATT................................................................................................. 22 1 3 1.67 5 0 0 1 0 0 1 0 2 1 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTTA............................................................................................... 24 1 3 1.33 4 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGTCTTTTGAGGTTATT................................................................................................. 22 1 3 1.33 4 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATA................................................................................................. 22 1 3 1.33 4 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTA........................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CGCCCTCAAAAGACGGTATTAGA................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTAGAT.................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTT.................................................................................................... 19 0 3 1.00 3 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACTGTATT...................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TAGATCGCCTTTTGAGGTTATT................................................................................................. 22 1 3 1.00 3 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTAGT................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................GCCCTCAAAAGACGGTATTA..................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAACAGACGGTATTA..................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCGTTTGAGGTTATT................................................................................................. 22 1 3 1.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGTTATT...................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCGTCAAAAGACGGTATTAGA................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTAT.................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCTCAAAAGACGGTATTT..................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATAGCCTTTTGAGGTTATT................................................................................................. 22 1 3 1.00 3 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0
...................................................................................................AGCCCTCAAAAGACGGTATTAGAT.................................................................. 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCTTCAAAAGACGGTATTA..................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTTT............................................................................................... 24 0 3 0.67 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGCGGTTATT................................................................................................. 22 1 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTAAGGTTATT................................................................................................. 22 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTATGTTATT................................................................................................. 22 2 3 0.67 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGCGGTTA................................................................................................... 20 1 3 0.67 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATATCGACTTTTGAGGTTATT................................................................................................. 22 1 3 0.67 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGATGTTATT................................................................................................. 22 1 3 0.67 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................TATATTGCCTTTTGAGGTTAT.................................................................................................. 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGGTATT................................................................................................. 22 1 3 0.67 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGCTATTT................................................................................................ 23 1 3 0.67 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATC................................................................................................. 22 1 3 0.67 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................TATCGCCTTTTGAGGTTATT................................................................................................. 20 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTAGGTTATT................................................................................................. 22 1 3 0.67 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCCCCGAAAAGACGGTATGAGA................................................................... 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGATTTTATTT................................................................................................ 23 2 4 0.50 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCATTTGAGGATATTT................................................................................................ 23 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTAGGTTATTT................................................................................................ 23 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGG...................................................................................................... 17 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGAATTCTGAGGTTATTT................................................................................................ 23 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGTTTA................................................................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCCCCGTTTGAGGTTATT................................................................................................. 21 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTAGGTTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATACCGCCTTTTGAGGTTAT.................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTTTCT............................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TACATCGCCTTTTGAGGTTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATCTCGCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTTT.................................................................................................. 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGTTATTA................................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATAACGCCTTTTGAGGTTCT.................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTGTGAGGTTA................................................................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGTGGTTGTT................................................................................................. 22 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GAGATCGCCTTTTGAGGTTATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGGTAT.................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGCGTTTATT................................................................................................. 21 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTAAT................................................................................................. 22 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGATTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTTTT.............................................................................................. 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATACCGCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................TCTATCCCCTTTTGAGGTTATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTTTA.............................................................................................. 25 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................ATCGCCTTTTGAGGTTATT................................................................................................. 19 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCTATCGCCTTTTGAGGTTATTC................................................................................................ 23 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................TATCGCCTTTTTAGGTTATT................................................................................................. 20 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGCTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................GCCTTTTGAGGTTAT.................................................................................................. 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATAACGCCTTTTGAGGTTATT................................................................................................. 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATTGCCTTTTGAGGTTA................................................................................................... 20 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTAC.................................................................................................. 21 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................TAGATCGCCGTTTGAGGTTATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATGGCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTACT................................................................................................. 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATATCTCCTTTTGAGGTTATTTA............................................................................................... 24 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CATATCGCCTTTTGAGGCTAT.................................................................................................. 21 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GCCTTTTGAGGTTATTT................................................................................................ 17 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCTTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GCCTTTTGAGGTTATT................................................................................................. 16 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCACCTTTTGAGGTTATTT................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TAGATCGCCTTTTGCGGTTATTTTCT............................................................................................. 26 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTAGTTTATTT................................................................................................ 23 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGGCTGGTGAGGTTATT................................................................................................. 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................TATATCGACTTTTGAGGTTAT.................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTC................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCGTTTGAGGCTATT................................................................................................. 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCTTTTTGAGGTTAGT................................................................................................. 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCTCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTAAAT................................................................................................ 23 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGACTTTTGAGGCTATTT................................................................................................ 23 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATCTCGCCTTTTGCGGTTATT................................................................................................. 21 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGCGGTTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TAGATCGCCTTTTGAGGTTATTT................................................................................................ 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TGTATCGCCTTTTGAGGCTGTT................................................................................................. 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTGTTT................................................................................................ 23 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGGGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCATTTTAAGGTTAT.................................................................................................. 21 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTATGTTAT.................................................................................................. 21 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTCTTGAGGTTA................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCACCTTTTGAGGATATT................................................................................................. 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CTATATCGCCTTTTGAGGCTATT................................................................................................. 23 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................TCGCCTTTTGAGGTTAT.................................................................................................. 17 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTT................................................................................................... 20 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTTTC.............................................................................................. 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATTTCGCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGACTTTTGAGGTTATTT................................................................................................ 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTAA.................................................................................................. 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGCTTAT.................................................................................................. 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGACTTTTGAGGTTATT................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TATCGCCTTTTGAGGTTACT................................................................................................. 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TATCGCCTTTTGAGGTTAT.................................................................................................. 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTCTGAGGTCATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TAGACCGCCGTTTGAGGTTATT................................................................................................. 22 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTATGTTATTT................................................................................................ 23 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTCCCTCAAAAGACGGTATTAG.................................................................... 22 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTATTATA.............................................................................................. 25 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATATCGCTTTTTGAGGTTAT.................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGTTTATA................................................................................................. 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATAGCGCCTTTTGAGGTTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGCGGCTAT.................................................................................................. 21 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCCTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GATATCGCCTTTTGAGGTTATTT................................................................................................ 23 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GTATATCGCCTTTTGAGGTTATA................................................................................................. 23 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTTAGGTTAT.................................................................................................. 20 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTATGTTA................................................................................................... 20 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTCAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGATGTTATTT................................................................................................ 23 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGGCTTTTGAGGTTATG................................................................................................. 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTGGTGAGGTTATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................TTCCCTCAAAAGACGGTA........................................................................ 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGCTTAT.................................................................................................. 20 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGATGTTAT.................................................................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATACCGCATTTTGAGGTTATTT................................................................................................ 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCATTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGTTCTT................................................................................................. 22 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTGAGGTTATA................................................................................................. 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGATGTTA................................................................................................... 20 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTATTGAGGTTATT................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATAGCGTCTTTTGAGGTTATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................AATATCGCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCATTTTGTGGTTATT................................................................................................. 22 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCCCCTCAAAAGACGGTATTA..................................................................... 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGCGGTTCTTT................................................................................................ 23 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CATATCGCCTTTTGAGGTTATT................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTAGTTTAT.................................................................................................. 21 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGACTTTTAAGGTTAT.................................................................................................. 21 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCATTTTGACGTTATT................................................................................................. 22 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCTCCTTTTGAGTTTAT.................................................................................................. 20 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATACCGGCTTTTGAGGTTAT.................................................................................................. 21 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTGAGGAT.................................................................................................... 19 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATAACGCCTTATGAGGTTCT.................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATCGCCTTTTTAGTTTATT................................................................................................. 21 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TCGATCGCCTTTTGAGGTTTTT................................................................................................. 22 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATAACGCCATTTGAGGTTA................................................................................................... 20 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGTCCTCAAAAGACGGTATTTT.................................................................... 22 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATAGGCTTTTGAGGTTAGTT................................................................................................ 22 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTATTTTATT................................................................................................. 22 3 20 0.20 4 0 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................TATAGCACCTTTTGAGGCTATT................................................................................................. 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCACCTTTTGAGGTTAT.................................................................................................. 21 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATATAGCCTTTTTAGGTTAT.................................................................................................. 20 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATAGACTTTTGAGCTTATT................................................................................................. 22 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TGTATTGCCTTTTGAGGTTCTT................................................................................................. 22 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGTTATCGCATCGCTTATAT.................................................................................................................. 20 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATATCGCCTTTTTCGTTTATT................................................................................................. 22 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GCCTTTTGCGGTTATT................................................................................................. 16 1 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TACGGTATTAGAGAT................................................................ 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................TATATCTCCTTTTTAGTTTATT................................................................................................. 22 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCTGTTCTCCTTAGATAGTTCTCAGTTTATCTTACTGTGAAGTTCTCTGTCATAGACTATAGCTTAGAGAATATAGCGGAAAACTCCAATAAAAGAATTACGGGAGTTTTCTGCCATAATCTCTAATGTGTCGACCTGTTAGCAACAAACTCCTACGTCACTCCTAGTTTCAGAGTATGCTTCTACGTG
******************************************************........(((((((.((((((.(((((((((.((((.....)))).))))))))).)))))).))))))).........******************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 08/21/2014 at 09:20 AM